RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 OR8I2Q8N0Y5 310 aa12.55□□□□□ -0.4
CBX4-204ENST00000495122 GRAMD2BQ96HH9 432 aa12.55□□□□□ -0.4
CBX4-204ENST00000495122 METTL26Q96S19 204 aa12.55□□□□□ -0.4
CBX4-204ENST00000495122 IGHV3-23P01764 117 aa12.54□□□□□ -0.4
CBX4-204ENST00000495122 TRGC1P0CF51 173 aa12.54□□□□□ -0.4
CBX4-204ENST00000495122 RPL15P61313 204 aaKnown RBP12.54□□□□□ -0.4
CBX4-204ENST00000495122 CFHR3Q02985 330 aa12.54□□□□□ -0.4
CBX4-204ENST00000495122 FABP9Q0Z7S8 132 aa12.54□□□□□ -0.4
CBX4-204ENST00000495122 OR5I1Q13606 314 aa12.54□□□□□ -0.4
CBX4-204ENST00000495122 CLEC19AQ6UXS0 136 aa12.54□□□□□ -0.4
CBX4-204ENST00000495122 TMEM183AQ8IXX5 376 aa12.54□□□□□ -0.4
CBX4-204ENST00000495122 OR4B1Q8NGF8 309 aa12.54□□□□□ -0.4
CBX4-204ENST00000495122 FRZBQ92765 325 aa12.54□□□□□ -0.4
CBX4-204ENST00000495122 SLC50A1Q9BRV3 221 aa12.54□□□□□ -0.4
CBX4-204ENST00000495122 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.53□□□□□ -0.4
CBX4-204ENST00000495122 FAM231BA6NCW3 169 aa12.53□□□□□ -0.4
CBX4-204ENST00000495122 SH2D7A6NKC9 451 aaPredicted RBP12.53□□□□□ -0.4
CBX4-204ENST00000495122 ZNF705GA8MUZ8 300 aaPredicted RBP12.53□□□□□ -0.4
CBX4-204ENST00000495122 NDUFA4O00483 81 aa12.53□□□□□ -0.4
CBX4-204ENST00000495122 CDX1P47902 265 aaPredicted RBP12.53□□□□□ -0.4
CBX4-204ENST00000495122 TPPP2P59282 170 aa12.53□□□□□ -0.4
CBX4-204ENST00000495122 COA6Q5JTJ3 125 aaKnown RBP12.53□□□□□ -0.4
CBX4-204ENST00000495122 TMEM86BQ8N661 226 aa12.53□□□□□ -0.4
CBX4-204ENST00000495122 LINC00479Q96M42 142 aa12.53□□□□□ -0.4
CBX4-204ENST00000495122 VPREB3Q9UKI3 123 aa12.53□□□□□ -0.4
CBX4-204ENST00000495122 U3KQE9 123 aa12.53□□□□□ -0.4
CBX4-204ENST00000495122 TRAV34A0A0B4J273 112 aa12.52□□□□□ -0.41
CBX4-204ENST00000495122 FAM181BA6NEQ2 426 aa12.52□□□□□ -0.41
CBX4-204ENST00000495122 DIRC3C9JPN6 131 aa12.52□□□□□ -0.41
CBX4-204ENST00000495122 SLC17A3O00476 420 aa12.52□□□□□ -0.41
CBX4-204ENST00000495122 WIPF1O43516 503 aa12.52□□□□□ -0.41
CBX4-204ENST00000495122 BUB3O43684 328 aa12.52□□□□□ -0.41
CBX4-204ENST00000495122 PSG3Q16557 428 aa12.52□□□□□ -0.41
CBX4-204ENST00000495122 MRPL53Q96EL3 112 aaKnown RBP12.52□□□□□ -0.41
CBX4-204ENST00000495122 MS4A10Q96PG2 267 aa12.52□□□□□ -0.41
CBX4-204ENST00000495122 GNB1LQ9BYB4 327 aa12.52□□□□□ -0.41
CBX4-204ENST00000495122 GFRA4Q9GZZ7 299 aa12.52□□□□□ -0.41
CBX4-204ENST00000495122 RNASE7Q9H1E1 156 aaKnown RBP12.52□□□□□ -0.41
CBX4-204ENST00000495122 GNB4Q9HAV0 340 aa12.52□□□□□ -0.41
CBX4-204ENST00000495122 VWFP04275 2813 aa12.52□□□□□ -0.41
CBX4-204ENST00000495122 WNK1Q9H4A3 2382 aa12.51□□□□□ -0.41
CBX4-204ENST00000495122 IZUMO1RA6ND01 250 aa12.51□□□□□ -0.41
CBX4-204ENST00000495122 ARL3P36405 182 aa12.51□□□□□ -0.41
CBX4-204ENST00000495122 GOLT1AQ6ZVE7 132 aa12.51□□□□□ -0.41
CBX4-204ENST00000495122 COX8CQ7Z4L0 72 aa12.51□□□□□ -0.41
CBX4-204ENST00000495122 EXOC3-AS1Q8N2X6 119 aa12.51□□□□□ -0.41
CBX4-204ENST00000495122 NUDT10Q8NFP7 164 aa12.51□□□□□ -0.41
CBX4-204ENST00000495122 TSKUQ8WUA8 353 aa12.51□□□□□ -0.41
CBX4-204ENST00000495122 NUDT11Q96G61 164 aa12.51□□□□□ -0.41
CBX4-204ENST00000495122 PRSS22Q9GZN4 317 aa12.51□□□□□ -0.41
CBX4-204ENST00000495122 TRAPPC1Q9Y5R8 145 aa12.51□□□□□ -0.41
CBX4-204ENST00000495122 CLPSL1A2RUU4 121 aa12.5□□□□□ -0.41
CBX4-204ENST00000495122 C19orf71A6NCJ1 209 aa12.5□□□□□ -0.41
CBX4-204ENST00000495122 NDUFA7O95182 113 aa12.5□□□□□ -0.41
CBX4-204ENST00000495122 IGLV2-11P01706 119 aa12.5□□□□□ -0.41
CBX4-204ENST00000495122 IGHG4P01861 327 aa12.5□□□□□ -0.41
CBX4-204ENST00000495122 AKR1D1P51857 326 aa12.5□□□□□ -0.41
CBX4-204ENST00000495122 NDUFA6P56556 154 aa12.5□□□□□ -0.41
CBX4-204ENST00000495122 ATP5L2Q7Z4Y8 100 aa12.5□□□□□ -0.41
CBX4-204ENST00000495122 WIPF2Q8TF74 440 aaPredicted RBP12.5□□□□□ -0.41
CBX4-204ENST00000495122 WFDC12Q8WWY7 111 aa12.5□□□□□ -0.41
CBX4-204ENST00000495122 DAZAP1Q96EP5 407 aaKnown RBP12.5□□□□□ -0.41
CBX4-204ENST00000495122 RPP21Q9H633 154 aaKnown RBP12.5□□□□□ -0.41
CBX4-204ENST00000495122 SERTAD4Q9NUC0 356 aa12.5□□□□□ -0.41
CBX4-204ENST00000495122 NAT8BQ9UHF3 227 aa12.5□□□□□ -0.41
CBX4-204ENST00000495122 RPH3ALQ9UNE2 315 aa12.5□□□□□ -0.41
CBX4-204ENST00000495122 A0A1B0GUS0 222 aa12.49□□□□□ -0.41
CBX4-204ENST00000495122 RBAKDNA6NC62 111 aa12.49□□□□□ -0.41
CBX4-204ENST00000495122 A8MWL6 223 aa12.49□□□□□ -0.41
CBX4-204ENST00000495122 NPIPB6E9PJ23 425 aa12.49□□□□□ -0.41
CBX4-204ENST00000495122 H3BTX0 84 aa12.49□□□□□ -0.41
CBX4-204ENST00000495122 IGHV4-59P01825 116 aa12.49□□□□□ -0.41
CBX4-204ENST00000495122 SMIM6P0DI80 62 aa12.49□□□□□ -0.41
CBX4-204ENST00000495122 BLCAPP62952 87 aa12.49□□□□□ -0.41
CBX4-204ENST00000495122 SMUG1Q53HV7 270 aa12.49□□□□□ -0.41
CBX4-204ENST00000495122 SAPCD1Q5SSQ6 148 aa12.49□□□□□ -0.41
CBX4-204ENST00000495122 LINC00518Q8N0U6 118 aa12.49□□□□□ -0.41
CBX4-204ENST00000495122 ZNF331Q9NQX6 463 aaPredicted RBP12.49□□□□□ -0.41
CBX4-204ENST00000495122 PSG8Q9UQ74 426 aa12.49□□□□□ -0.41
CBX4-204ENST00000495122 A0A1W2PS18 150 aa12.48□□□□□ -0.41
CBX4-204ENST00000495122 P01737 135 aa12.48□□□□□ -0.41
CBX4-204ENST00000495122 HLA-DQA1P01909 254 aa12.48□□□□□ -0.41
CBX4-204ENST00000495122 PF4V1P10720 104 aa12.48□□□□□ -0.41
CBX4-204ENST00000495122 C17orf77Q96MU5 243 aa12.48□□□□□ -0.41
CBX4-204ENST00000495122 NPFFR1Q9GZQ6 430 aa12.48□□□□□ -0.41
CBX4-204ENST00000495122 ZNF785A8K8V0 405 aa12.47□□□□□ -0.41
CBX4-204ENST00000495122 SNRPCP09234 159 aaKnown RBP12.47□□□□□ -0.41
CBX4-204ENST00000495122 SLC35B1P78383 322 aa12.47□□□□□ -0.41
CBX4-204ENST00000495122 C16orf54Q6UWD8 224 aa12.47□□□□□ -0.41
CBX4-204ENST00000495122 GBGT1Q8N5D6 347 aa12.47□□□□□ -0.41
CBX4-204ENST00000495122 NHLRC2Q8NBF2 726 aa12.47□□□□□ -0.41
CBX4-204ENST00000495122 SMAD5-AS1Q9Y6J3 95 aa12.47□□□□□ -0.41
CBX4-204ENST00000495122 PSMB8P28062 276 aa12.46□□□□□ -0.41
CBX4-204ENST00000495122 S100A2P29034 98 aa12.46□□□□□ -0.41
CBX4-204ENST00000495122 SAMD13Q5VXD3 122 aa12.46□□□□□ -0.41
CBX4-204ENST00000495122 PRR27Q6MZM9 219 aa12.46□□□□□ -0.41
CBX4-204ENST00000495122 PRNTQ86SH4 94 aa12.46□□□□□ -0.41
CBX4-204ENST00000495122 HIST3H2BBQ8N257 126 aa12.46□□□□□ -0.41
CBX4-204ENST00000495122 NOL4LQ96MY1 436 aaPredicted RBP12.46□□□□□ -0.41
CBX4-204ENST00000495122 LINC00527Q9UJ94 153 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms