RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 SUN5Q8TC36 379 aa12.56□□□□□ -0.4
SNX17-209ENST00000494893 FXYD5Q96DB9 178 aa12.56□□□□□ -0.4
SNX17-209ENST00000494893 TMEM167BQ9NRX6 74 aa12.56□□□□□ -0.4
SNX17-209ENST00000494893 UBE2CO00762 179 aa12.55□□□□□ -0.4
SNX17-209ENST00000494893 OR10J4P0C629 311 aa12.55□□□□□ -0.4
SNX17-209ENST00000494893 PYYP10082 97 aa12.55□□□□□ -0.4
SNX17-209ENST00000494893 GALR1P47211 349 aa12.55□□□□□ -0.4
SNX17-209ENST00000494893 PPT1P50897 306 aa12.55□□□□□ -0.4
SNX17-209ENST00000494893 NDUFA5Q16718 116 aa12.55□□□□□ -0.4
SNX17-209ENST00000494893 Q6ZWC4 215 aa12.55□□□□□ -0.4
SNX17-209ENST00000494893 C20orf173Q96LM9 149 aa12.55□□□□□ -0.4
SNX17-209ENST00000494893 GPR82Q96P67 336 aa12.55□□□□□ -0.4
SNX17-209ENST00000494893 CSTL1Q9H114 145 aa12.55□□□□□ -0.4
SNX17-209ENST00000494893 HIST1H1EP10412 219 aaKnown RBP12.54□□□□□ -0.4
SNX17-209ENST00000494893 SNRPD3P62318 126 aaKnown RBP12.54□□□□□ -0.4
SNX17-209ENST00000494893 UBE2L3P68036 154 aaKnown RBP12.54□□□□□ -0.4
SNX17-209ENST00000494893 ACTL10Q5JWF8 245 aa12.54□□□□□ -0.4
SNX17-209ENST00000494893 GDF5OSQ5U4N7 250 aa12.54□□□□□ -0.4
SNX17-209ENST00000494893 RNF183Q96D59 192 aa12.54□□□□□ -0.4
SNX17-209ENST00000494893 GNG13Q9P2W3 67 aa12.54□□□□□ -0.4
SNX17-209ENST00000494893 TRAV8-2A0A0B4J237 113 aa12.53□□□□□ -0.4
SNX17-209ENST00000494893 RAB19A4D1S5 217 aa12.53□□□□□ -0.4
SNX17-209ENST00000494893 IFNA1P01562 189 aa12.53□□□□□ -0.4
SNX17-209ENST00000494893 NBEAP1P0C6P0 100 aa12.53□□□□□ -0.4
SNX17-209ENST00000494893 IGLC2P0DOY2 106 aa12.53□□□□□ -0.4
SNX17-209ENST00000494893 COMMD7Q86VX2 200 aa12.53□□□□□ -0.4
SNX17-209ENST00000494893 STHQ8IWL8 128 aa12.53□□□□□ -0.4
SNX17-209ENST00000494893 FAM210AQ96ND0 272 aa12.53□□□□□ -0.4
SNX17-209ENST00000494893 MANBALQ9NQG1 85 aa12.53□□□□□ -0.4
SNX17-209ENST00000494893 TP53TG1Q9Y2A0 90 aa12.53□□□□□ -0.4
SNX17-209ENST00000494893 RBFOX3A6NFN3 312 aa12.52□□□□□ -0.41
SNX17-209ENST00000494893 H3BMM0 161 aa12.52□□□□□ -0.41
SNX17-209ENST00000494893 H3BQ15 152 aa12.52□□□□□ -0.41
SNX17-209ENST00000494893 ISLRO14498 428 aa12.52□□□□□ -0.41
SNX17-209ENST00000494893 SPRY2O43597 315 aa12.52□□□□□ -0.41
SNX17-209ENST00000494893 GUK1Q16774 197 aa12.52□□□□□ -0.41
SNX17-209ENST00000494893 IGFL4Q6B9Z1 124 aa12.52□□□□□ -0.41
SNX17-209ENST00000494893 LINC00052Q96N35 136 aa12.52□□□□□ -0.41
SNX17-209ENST00000494893 ZNF586Q9NXT0 402 aa12.52□□□□□ -0.41
SNX17-209ENST00000494893 AGRNO00468 2067 aa12.52□□□□□ -0.41
SNX17-209ENST00000494893 A0A087X0K7 114 aa12.51□□□□□ -0.41
SNX17-209ENST00000494893 BCL2P10415 239 aa12.51□□□□□ -0.41
SNX17-209ENST00000494893 TAGLN2P37802 199 aaKnown RBP12.51□□□□□ -0.41
SNX17-209ENST00000494893 ID1P41134 155 aa12.51□□□□□ -0.41
SNX17-209ENST00000494893 MEOX2P50222 304 aa12.51□□□□□ -0.41
SNX17-209ENST00000494893 ARL2-SNX15V9GYD0 113 aa12.51□□□□□ -0.41
SNX17-209ENST00000494893 LOC102723971A0A1B0GUV8 181 aa12.5□□□□□ -0.41
SNX17-209ENST00000494893 F6UB75 175 aa12.5□□□□□ -0.41
SNX17-209ENST00000494893 PAGE4O60829 102 aa12.5□□□□□ -0.41
SNX17-209ENST00000494893 CA1P00915 261 aaPredicted RBP12.5□□□□□ -0.41
SNX17-209ENST00000494893 SNRPCP09234 159 aaKnown RBP12.5□□□□□ -0.41
SNX17-209ENST00000494893 HLA-DRB4P13762 266 aa12.5□□□□□ -0.41
SNX17-209ENST00000494893 ATF4P18848 351 aaPredicted RBP12.5□□□□□ -0.41
SNX17-209ENST00000494893 TOR2AQ5JU69 321 aa12.5□□□□□ -0.41
SNX17-209ENST00000494893 ZNF506Q5JVG8 444 aa12.5□□□□□ -0.41
SNX17-209ENST00000494893 SLC7A5P1Q8MH63 180 aa12.5□□□□□ -0.41
SNX17-209ENST00000494893 EIF4E3Q8N5X7 224 aaKnown RBP12.5□□□□□ -0.41
SNX17-209ENST00000494893 BLNKQ8WV28 456 aa12.5□□□□□ -0.41
SNX17-209ENST00000494893 C16orf92Q96LL3 132 aa12.5□□□□□ -0.41
SNX17-209ENST00000494893 RARRES2Q99969 163 aa12.5□□□□□ -0.41
SNX17-209ENST00000494893 YTHDF2Q9Y5A9 579 aaKnown RBP12.5□□□□□ -0.41
SNX17-209ENST00000494893 HLA-DRB4X5D2U9 266 aa12.5□□□□□ -0.41
SNX17-209ENST00000494893 TRBV19A0A075B6N1 114 aa12.49□□□□□ -0.41
SNX17-209ENST00000494893 A0A1W2PRE2 83 aa12.49□□□□□ -0.41
SNX17-209ENST00000494893 FAM74A7A6NL05 159 aa12.49□□□□□ -0.41
SNX17-209ENST00000494893 HLA-DMBP28068 263 aa12.49□□□□□ -0.41
SNX17-209ENST00000494893 UBE2G2P60604 165 aa12.49□□□□□ -0.41
SNX17-209ENST00000494893 RNF182Q8N6D2 247 aa12.49□□□□□ -0.41
SNX17-209ENST00000494893 MUC7Q8TAX7 377 aa12.49□□□□□ -0.41
SNX17-209ENST00000494893 EIF5A2Q9GZV4 153 aaKnown RBP12.49□□□□□ -0.41
SNX17-209ENST00000494893 SAV1Q9H4B6 383 aaPredicted RBP12.49□□□□□ -0.41
SNX17-209ENST00000494893 VAX2Q9UIW0 290 aa12.49□□□□□ -0.41
SNX17-209ENST00000494893 STARD9Q9P2P6 4700 aa12.48□□□□□ -0.41
SNX17-209ENST00000494893 H3BTX0 84 aa12.48□□□□□ -0.41
SNX17-209ENST00000494893 NDUFB4O95168 129 aa12.48□□□□□ -0.41
SNX17-209ENST00000494893 SRSF3P84103 164 aaKnown RBP12.48□□□□□ -0.41
SNX17-209ENST00000494893 PDE6HQ13956 83 aa12.48□□□□□ -0.41
SNX17-209ENST00000494893 ICAM4Q14773 271 aa12.48□□□□□ -0.41
SNX17-209ENST00000494893 PEA15Q15121 130 aa12.48□□□□□ -0.41
SNX17-209ENST00000494893 CST9LP1Q5W188 147 aa12.48□□□□□ -0.41
SNX17-209ENST00000494893 UQCC3Q6UW78 93 aa12.48□□□□□ -0.41
SNX17-209ENST00000494893 FOXI2Q6ZQN5 318 aa12.48□□□□□ -0.41
SNX17-209ENST00000494893 SMDT1Q9H4I9 107 aa12.48□□□□□ -0.41
SNX17-209ENST00000494893 CSMD3Q7Z407 3707 aa12.47□□□□□ -0.41
SNX17-209ENST00000494893 A0A0J9YX75 114 aa12.47□□□□□ -0.41
SNX17-209ENST00000494893 SLC17A3O00476 420 aa12.47□□□□□ -0.41
SNX17-209ENST00000494893 ZNF253O75346 499 aa12.47□□□□□ -0.41
SNX17-209ENST00000494893 RANP62826 216 aaKnown RBP12.47□□□□□ -0.41
SNX17-209ENST00000494893 MEF2BQ02080 365 aaPredicted RBP12.47□□□□□ -0.41
SNX17-209ENST00000494893 SAMD13Q5VXD3 122 aa12.47□□□□□ -0.41
SNX17-209ENST00000494893 MORN3Q6PF18 240 aaPredicted RBP12.47□□□□□ -0.41
SNX17-209ENST00000494893 CSNK1G2-AS1Q8NCQ2 148 aa12.47□□□□□ -0.41
SNX17-209ENST00000494893 RXFP4Q8TDU9 374 aa12.47□□□□□ -0.41
SNX17-209ENST00000494893 TXNDC17Q9BRA2 123 aa12.47□□□□□ -0.41
SNX17-209ENST00000494893 NKX6-2Q9C056 277 aaPredicted RBP12.47□□□□□ -0.41
SNX17-209ENST00000494893 A8MTW9 85 aa12.46□□□□□ -0.41
SNX17-209ENST00000494893 C11orf94C9JXX5 98 aa12.46□□□□□ -0.41
SNX17-209ENST00000494893 NDUFS6O75380 124 aaKnown RBP12.46□□□□□ -0.41
SNX17-209ENST00000494893 IGKV3-20P01619 116 aa12.46□□□□□ -0.41
SNX17-209ENST00000494893 PRB4P10163 310 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 171.3 ms