RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 TRBV19A0A075B6N1 114 aa6.33□□□□□ -1.4
ITGB1-217ENST00000494395 ZNF705FA8MVS1 300 aaPredicted RBP6.33□□□□□ -1.4
ITGB1-217ENST00000494395 C17orf112F2Z3M2 114 aa6.33□□□□□ -1.4
ITGB1-217ENST00000494395 H3BTX0 84 aa6.33□□□□□ -1.4
ITGB1-217ENST00000494395 NDUFB4O95168 129 aa6.33□□□□□ -1.4
ITGB1-217ENST00000494395 IGKV3-20P01619 116 aa6.33□□□□□ -1.4
ITGB1-217ENST00000494395 ZNF705DP0CH99 300 aaPredicted RBP6.33□□□□□ -1.4
ITGB1-217ENST00000494395 ZNF705BP0CI00 300 aaPredicted RBP6.33□□□□□ -1.4
ITGB1-217ENST00000494395 RBMY1A1P0DJD3 496 aaKnown RBP6.33□□□□□ -1.4
ITGB1-217ENST00000494395 RBMY1CP0DJD4 496 aa6.33□□□□□ -1.4
ITGB1-217ENST00000494395 PYYP10082 97 aa6.33□□□□□ -1.4
ITGB1-217ENST00000494395 HIST1H1EP10412 219 aaKnown RBP6.33□□□□□ -1.4
ITGB1-217ENST00000494395 CNN1P51911 297 aaKnown RBP6.33□□□□□ -1.4
ITGB1-217ENST00000494395 FXYD7P58549 80 aa6.33□□□□□ -1.4
ITGB1-217ENST00000494395 PSG9Q00887 426 aa6.33□□□□□ -1.4
ITGB1-217ENST00000494395 RBMY1FQ15415 496 aaKnown RBP6.33□□□□□ -1.4
ITGB1-217ENST00000494395 GUK1Q16774 197 aa6.33□□□□□ -1.4
ITGB1-217ENST00000494395 ZFAND6Q6FIF0 208 aa6.33□□□□□ -1.4
ITGB1-217ENST00000494395 MIR17HGQ75NE6 70 aa6.33□□□□□ -1.4
ITGB1-217ENST00000494395 ZNF738Q8NE65 137 aa6.33□□□□□ -1.4
ITGB1-217ENST00000494395 OR4B1Q8NGF8 309 aa6.33□□□□□ -1.4
ITGB1-217ENST00000494395 OR8A1Q8NGG7 326 aa6.33□□□□□ -1.4
ITGB1-217ENST00000494395 ZNF503Q96F45 646 aa6.33□□□□□ -1.4
ITGB1-217ENST00000494395 ARPC5LQ9BPX5 153 aa6.33□□□□□ -1.4
ITGB1-217ENST00000494395 C1QTNF4Q9BXJ3 329 aa6.33□□□□□ -1.4
ITGB1-217ENST00000494395 MRPL32Q9BYC8 188 aaKnown RBP6.33□□□□□ -1.4
ITGB1-217ENST00000494395 TNFSF18Q9UNG2 199 aa6.33□□□□□ -1.4
ITGB1-217ENST00000494395 LYSTQ99698 3801 aa6.33□□□□□ -1.4
ITGB1-217ENST00000494395 KMT2CQ8NEZ4 4911 aaKnown RBP6.32□□□□□ -1.4
ITGB1-217ENST00000494395 IGHV4-28A0A0C4DH34 117 aa6.32□□□□□ -1.4
ITGB1-217ENST00000494395 PRAC2D3DTV9 90 aa6.32□□□□□ -1.4
ITGB1-217ENST00000494395 CRXO43186 299 aaPredicted RBP6.32□□□□□ -1.4
ITGB1-217ENST00000494395 DUSP14O95147 198 aaKnown RBP6.32□□□□□ -1.4
ITGB1-217ENST00000494395 IFNA5P01569 189 aa6.32□□□□□ -1.4
ITGB1-217ENST00000494395 PRB4P10163 310 aaPredicted RBP6.32□□□□□ -1.4
ITGB1-217ENST00000494395 MIFP14174 115 aa6.32□□□□□ -1.4
ITGB1-217ENST00000494395 PDE6HQ13956 83 aa6.32□□□□□ -1.4
ITGB1-217ENST00000494395 FFAR4Q5NUL3 377 aa6.32□□□□□ -1.4
ITGB1-217ENST00000494395 C1orf158Q8N1D5 194 aa6.32□□□□□ -1.4
ITGB1-217ENST00000494395 OR2T35Q8NGX2 323 aa6.32□□□□□ -1.4
ITGB1-217ENST00000494395 LRRC20Q8TCA0 184 aa6.32□□□□□ -1.4
ITGB1-217ENST00000494395 RPUSD4Q96CM3 377 aaKnown RBP6.32□□□□□ -1.4
ITGB1-217ENST00000494395 MRPL53Q96EL3 112 aaKnown RBP6.32□□□□□ -1.4
ITGB1-217ENST00000494395 NEU1Q99519 415 aa6.32□□□□□ -1.4
ITGB1-217ENST00000494395 MFFQ9GZY8 342 aa6.32□□□□□ -1.4
ITGB1-217ENST00000494395 FAM30AQ9NZY2 134 aa6.32□□□□□ -1.4
ITGB1-217ENST00000494395 FUT9Q9Y231 359 aa6.32□□□□□ -1.4
ITGB1-217ENST00000494395 TIMM9Q9Y5J7 89 aa6.32□□□□□ -1.4
ITGB1-217ENST00000494395 DYNC2H1Q8NCM8 4307 aaKnown RBP6.31□□□□□ -1.4
ITGB1-217ENST00000494395 FXYD6-FXYD2A0A087WZ82 144 aa6.31□□□□□ -1.4
ITGB1-217ENST00000494395 M0R2Z0 102 aa6.31□□□□□ -1.4
ITGB1-217ENST00000494395 DEFB4AO15263 64 aa6.31□□□□□ -1.4
ITGB1-217ENST00000494395 ZNF266Q14584 549 aa6.31□□□□□ -1.4
ITGB1-217ENST00000494395 OR2G3Q8NGZ4 309 aa6.31□□□□□ -1.4
ITGB1-217ENST00000494395 SCGB1C1Q8TD33 95 aa6.31□□□□□ -1.4
ITGB1-217ENST00000494395 FXYD5Q96DB9 178 aa6.31□□□□□ -1.4
ITGB1-217ENST00000494395 BOLA2-SMG1P6H3BVE0 249 aa6.3□□□□□ -1.4
ITGB1-217ENST00000494395 M0R3E3 92 aa6.3□□□□□ -1.4
ITGB1-217ENST00000494395 AMBPP02760 352 aa6.3□□□□□ -1.4
ITGB1-217ENST00000494395 M6PRP20645 277 aa6.3□□□□□ -1.4
ITGB1-217ENST00000494395 ATP6V0CP27449 155 aa6.3□□□□□ -1.4
ITGB1-217ENST00000494395 HIST1H1AQ02539 215 aaPredicted RBP6.3□□□□□ -1.4
ITGB1-217ENST00000494395 SPINK13Q1W4C9 94 aa6.3□□□□□ -1.4
ITGB1-217ENST00000494395 PHYHIPLQ96FC7 376 aa6.3□□□□□ -1.4
ITGB1-217ENST00000494395 IGF2BP2-AS1Q96M15 143 aa6.3□□□□□ -1.4
ITGB1-217ENST00000494395 PSMG3Q9BT73 122 aaPredicted RBP6.3□□□□□ -1.4
ITGB1-217ENST00000494395 PAXXQ9BUH6 204 aa6.3□□□□□ -1.4
ITGB1-217ENST00000494395 OR51M1Q9H341 326 aa6.3□□□□□ -1.4
ITGB1-217ENST00000494395 LOC100996750A0A140TA64 210 aa6.29□□□□□ -1.4
ITGB1-217ENST00000494395 SMIM9A6NGZ8 99 aa6.29□□□□□ -1.4
ITGB1-217ENST00000494395 SMLR1H3BR10 107 aa6.29□□□□□ -1.4
ITGB1-217ENST00000494395 EIF3GO75821 320 aaKnown RBP eCLIP6.29□□□□□ -1.4
ITGB1-217ENST00000494395 OR10J4P0C629 311 aa6.29□□□□□ -1.4
ITGB1-217ENST00000494395 NBEAP1P0C6P0 100 aa6.29□□□□□ -1.4
ITGB1-217ENST00000494395 RAB2AP61019 212 aa6.29□□□□□ -1.4
ITGB1-217ENST00000494395 RHOBP62745 196 aa6.29□□□□□ -1.4
ITGB1-217ENST00000494395 ACOT6Q3I5F7 207 aaPredicted RBP6.29□□□□□ -1.4
ITGB1-217ENST00000494395 KHDC3LQ587J8 217 aa6.29□□□□□ -1.4
ITGB1-217ENST00000494395 RPL7L1Q6DKI1 246 aaKnown RBP6.29□□□□□ -1.4
ITGB1-217ENST00000494395 BAP18Q8IXM2 172 aa6.29□□□□□ -1.4
ITGB1-217ENST00000494395 EXOC3-AS1Q8N2X6 119 aa6.29□□□□□ -1.4
ITGB1-217ENST00000494395 RPP25LQ8N5L8 163 aaKnown RBP6.29□□□□□ -1.4
ITGB1-217ENST00000494395 HSD17B11Q8NBQ5 300 aa6.29□□□□□ -1.4
ITGB1-217ENST00000494395 INO80EQ8NBZ0 244 aaPredicted RBP6.29□□□□□ -1.4
ITGB1-217ENST00000494395 OR11H4Q8NGC9 324 aa6.29□□□□□ -1.4
ITGB1-217ENST00000494395 BLNKQ8WV28 456 aa6.29□□□□□ -1.4
ITGB1-217ENST00000494395 KRTAP4-6Q9BYQ5 205 aa6.29□□□□□ -1.4
ITGB1-217ENST00000494395 CELA1Q9UNI1 258 aa6.29□□□□□ -1.4
ITGB1-217ENST00000494395 PRELID1Q9Y255 219 aa6.29□□□□□ -1.4
ITGB1-217ENST00000494395 TENM2Q9NT68 2774 aa6.29□□□□□ -1.4
ITGB1-217ENST00000494395 OR7C2O60412 319 aa6.28□□□□□ -1.4
ITGB1-217ENST00000494395 NANOS2P60321 138 aaKnown RBP6.28□□□□□ -1.4
ITGB1-217ENST00000494395 SERF2P84101 59 aa6.28□□□□□ -1.4
ITGB1-217ENST00000494395 PMS2P11Q13670 270 aa6.28□□□□□ -1.4
ITGB1-217ENST00000494395 ICAM4Q14773 271 aa6.28□□□□□ -1.4
ITGB1-217ENST00000494395 Q6ZNX1 250 aa6.28□□□□□ -1.4
ITGB1-217ENST00000494395 OR10J6PQ8NGY7 276 aa6.28□□□□□ -1.4
ITGB1-217ENST00000494395 C11orf45Q8TAV5 145 aa6.28□□□□□ -1.4
ITGB1-217ENST00000494395 FAM19A4Q96LR4 140 aa6.28□□□□□ -1.4
ITGB1-217ENST00000494395 ODF3Q96PU9 254 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms