RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 HIGD1AQ9Y241 93 aa4.68□□□□□ -1.66
CPSF7-213ENST00000494016 KLF12Q9Y4X4 402 aa4.68□□□□□ -1.66
CPSF7-213ENST00000494016 V9GYV3 84 aa4.68□□□□□ -1.66
CPSF7-213ENST00000494016 IGHV4-61A0A0C4DH41 118 aa4.67□□□□□ -1.66
CPSF7-213ENST00000494016 PCP4L1A6NKN8 68 aa4.67□□□□□ -1.66
CPSF7-213ENST00000494016 LINC01548A6NM66 108 aa4.67□□□□□ -1.66
CPSF7-213ENST00000494016 PPP5D1E7EU14 171 aa4.67□□□□□ -1.66
CPSF7-213ENST00000494016 PEX7O00628 323 aa4.67□□□□□ -1.66
CPSF7-213ENST00000494016 ISLRO14498 428 aa4.67□□□□□ -1.66
CPSF7-213ENST00000494016 MRPS12O15235 138 aaKnown RBP4.67□□□□□ -1.66
CPSF7-213ENST00000494016 TOMM40O96008 361 aa4.67□□□□□ -1.66
CPSF7-213ENST00000494016 HLA-DRB1P01911 266 aa4.67□□□□□ -1.66
CPSF7-213ENST00000494016 S100A8P05109 93 aa4.67□□□□□ -1.66
CPSF7-213ENST00000494016 FAM106CPP0CH98 169 aa4.67□□□□□ -1.66
CPSF7-213ENST00000494016 RD3LP0DJH9 198 aa4.67□□□□□ -1.66
CPSF7-213ENST00000494016 HIST1H1EP10412 219 aaKnown RBP4.67□□□□□ -1.66
CPSF7-213ENST00000494016 SAA4P35542 130 aa4.67□□□□□ -1.66
CPSF7-213ENST00000494016 IER3P46695 156 aa4.67□□□□□ -1.66
CPSF7-213ENST00000494016 YPEL3P61236 119 aaPredicted RBP4.67□□□□□ -1.66
CPSF7-213ENST00000494016 GNG5P63218 68 aa4.67□□□□□ -1.66
CPSF7-213ENST00000494016 SLAQ13239 276 aa4.67□□□□□ -1.66
CPSF7-213ENST00000494016 TMEM183BQ1AE95 376 aa4.67□□□□□ -1.66
CPSF7-213ENST00000494016 COA6Q5JTJ3 125 aaKnown RBP4.67□□□□□ -1.66
CPSF7-213ENST00000494016 HIST3H2BBQ8N257 126 aa4.67□□□□□ -1.66
CPSF7-213ENST00000494016 WIPF2Q8TF74 440 aaPredicted RBP4.67□□□□□ -1.66
CPSF7-213ENST00000494016 BLNKQ8WV28 456 aa4.67□□□□□ -1.66
CPSF7-213ENST00000494016 NRGNQ92686 78 aa4.67□□□□□ -1.66
CPSF7-213ENST00000494016 ZNF48Q96MX3 618 aaPredicted RBP4.67□□□□□ -1.66
CPSF7-213ENST00000494016 HSPB9Q9BQS6 159 aa4.67□□□□□ -1.66
CPSF7-213ENST00000494016 ATG101Q9BSB4 218 aa4.67□□□□□ -1.66
CPSF7-213ENST00000494016 SHANK2-AS3Q9BTD1 123 aa4.67□□□□□ -1.66
CPSF7-213ENST00000494016 SLC25A39Q9BZJ4 359 aaPredicted RBP4.67□□□□□ -1.66
CPSF7-213ENST00000494016 KLK15Q9H2R5 256 aa4.67□□□□□ -1.66
CPSF7-213ENST00000494016 LPAR2Q9HBW0 351 aa4.67□□□□□ -1.66
CPSF7-213ENST00000494016 ZNF586Q9NXT0 402 aa4.67□□□□□ -1.66
CPSF7-213ENST00000494016 S4R3C0 116 aa4.67□□□□□ -1.66
CPSF7-213ENST00000494016 AKAP6Q13023 2319 aa4.67□□□□□ -1.66
CPSF7-213ENST00000494016 TRAV9-1A0A075B6T8 112 aa4.66□□□□□ -1.66
CPSF7-213ENST00000494016 TRAV30A0A087WSZ9 112 aa4.66□□□□□ -1.66
CPSF7-213ENST00000494016 IGHV1-69DA0A0B4J2H0 117 aa4.66□□□□□ -1.66
CPSF7-213ENST00000494016 H3BRN7 92 aa4.66□□□□□ -1.66
CPSF7-213ENST00000494016 H3BTX0 84 aa4.66□□□□□ -1.66
CPSF7-213ENST00000494016 IGHV1-69P01742 117 aa4.66□□□□□ -1.66
CPSF7-213ENST00000494016 CTSGP08311 255 aa4.66□□□□□ -1.66
CPSF7-213ENST00000494016 BRS3P32247 399 aa4.66□□□□□ -1.66
CPSF7-213ENST00000494016 ERVFC1-1P60608 527 aa4.66□□□□□ -1.66
CPSF7-213ENST00000494016 LYZP61626 148 aa4.66□□□□□ -1.66
CPSF7-213ENST00000494016 ERASQ7Z444 233 aa4.66□□□□□ -1.66
CPSF7-213ENST00000494016 BAGE2Q86Y30 109 aa4.66□□□□□ -1.66
CPSF7-213ENST00000494016 LRRC75A-AS1Q8N1F1 130 aa4.66□□□□□ -1.66
CPSF7-213ENST00000494016 ZNF479Q96JC4 524 aa4.66□□□□□ -1.66
CPSF7-213ENST00000494016 BTF3L4Q96K17 158 aa4.66□□□□□ -1.66
CPSF7-213ENST00000494016 C17orf77Q96MU5 243 aa4.66□□□□□ -1.66
CPSF7-213ENST00000494016 CCL19Q99731 98 aa4.66□□□□□ -1.66
CPSF7-213ENST00000494016 RASL11BQ9BPW5 248 aa4.66□□□□□ -1.66
CPSF7-213ENST00000494016 TCEAL7Q9BRU2 100 aa4.66□□□□□ -1.66
CPSF7-213ENST00000494016 ALKBH7Q9BT30 221 aaPredicted RBP4.66□□□□□ -1.66
CPSF7-213ENST00000494016 RNASE7Q9H1E1 156 aaKnown RBP4.66□□□□□ -1.66
CPSF7-213ENST00000494016 C1RLQ9NZP8 487 aa4.66□□□□□ -1.66
CPSF7-213ENST00000494016 PITPNC1Q9UKF7 332 aa4.66□□□□□ -1.66
CPSF7-213ENST00000494016 TRAPPC1Q9Y5R8 145 aa4.66□□□□□ -1.66
CPSF7-213ENST00000494016 SOX21Q9Y651 276 aaPredicted RBP4.66□□□□□ -1.66
CPSF7-213ENST00000494016 COX11Q9Y6N1 276 aa4.66□□□□□ -1.66
CPSF7-213ENST00000494016 IGHV3OR16-10A0A075B7F0 116 aa4.65□□□□□ -1.67
CPSF7-213ENST00000494016 IGHV4-30-2A0A087WSY4 118 aa4.65□□□□□ -1.67
CPSF7-213ENST00000494016 TRBV9A0A0B4J1U6 114 aa4.65□□□□□ -1.67
CPSF7-213ENST00000494016 A0A0U1RRA0 63 aa4.65□□□□□ -1.67
CPSF7-213ENST00000494016 SMIM27A0A1W2PRY6 76 aa4.65□□□□□ -1.67
CPSF7-213ENST00000494016 SAP30O75446 220 aa4.65□□□□□ -1.67
CPSF7-213ENST00000494016 OR2J3O76001 311 aa4.65□□□□□ -1.67
CPSF7-213ENST00000494016 IGHV3-23P01764 117 aa4.65□□□□□ -1.67
CPSF7-213ENST00000494016 TCRAP04437 139 aa4.65□□□□□ -1.67
CPSF7-213ENST00000494016 SLC25A5P05141 298 aaKnown RBP4.65□□□□□ -1.67
CPSF7-213ENST00000494016 FABP1P07148 127 aa4.65□□□□□ -1.67
CPSF7-213ENST00000494016 IGLC2P0DOY2 106 aa4.65□□□□□ -1.67
CPSF7-213ENST00000494016 PAX1P15863 534 aa4.65□□□□□ -1.67
CPSF7-213ENST00000494016 FCGR2BP31994 310 aaPredicted RBP4.65□□□□□ -1.67
CPSF7-213ENST00000494016 ATP5J2P56134 94 aa4.65□□□□□ -1.67
CPSF7-213ENST00000494016 RPEL1Q2QD12 228 aa4.65□□□□□ -1.67
CPSF7-213ENST00000494016 LINC00322Q6ZN03 302 aaPredicted RBP4.65□□□□□ -1.67
CPSF7-213ENST00000494016 FAM231DQ6ZW35 169 aa4.65□□□□□ -1.67
CPSF7-213ENST00000494016 TMEM183AQ8IXX5 376 aa4.65□□□□□ -1.67
CPSF7-213ENST00000494016 OR8I2Q8N0Y5 310 aa4.65□□□□□ -1.67
CPSF7-213ENST00000494016 C5orf56Q8N8D9 126 aa4.65□□□□□ -1.67
CPSF7-213ENST00000494016 VN1R17PQ8TDU5 208 aa4.65□□□□□ -1.67
CPSF7-213ENST00000494016 CHRDL1Q9BU40 450 aa4.65□□□□□ -1.67
CPSF7-213ENST00000494016 Q9H3A6 140 aa4.65□□□□□ -1.67
CPSF7-213ENST00000494016 OTORQ9NRC9 128 aa4.65□□□□□ -1.67
CPSF7-213ENST00000494016 C21orf62Q9NYP8 219 aa4.65□□□□□ -1.67
CPSF7-213ENST00000494016 FLNAP21333 2647 aaKnown RBP4.65□□□□□ -1.67
CPSF7-213ENST00000494016 NBEAL1Q6ZS30 2694 aa4.65□□□□□ -1.67
CPSF7-213ENST00000494016 PRRC2AP48634 2157 aaKnown RBP4.64□□□□□ -1.67
CPSF7-213ENST00000494016 TRBV19A0A075B6N1 114 aa4.64□□□□□ -1.67
CPSF7-213ENST00000494016 TRAV25A0A0B4J276 109 aa4.64□□□□□ -1.67
CPSF7-213ENST00000494016 TRBV6-1A0A0K0K1D8 114 aa4.64□□□□□ -1.67
CPSF7-213ENST00000494016 CBY3A6NI87 242 aa4.64□□□□□ -1.67
CPSF7-213ENST00000494016 G3V318 75 aa4.64□□□□□ -1.67
CPSF7-213ENST00000494016 GATCO43716 136 aaKnown RBP4.64□□□□□ -1.67
CPSF7-213ENST00000494016 NUPR1O60356 82 aa4.64□□□□□ -1.67
CPSF7-213ENST00000494016 IGLV2-11P01706 119 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms