RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 SLAQ13239 276 aa8.32□□□□□ -1.08
PHACTR4-204ENST00000493669 KLF5Q13887 457 aaPredicted RBP8.32□□□□□ -1.08
PHACTR4-204ENST00000493669 LINC00527Q9UJ94 153 aa8.32□□□□□ -1.08
PHACTR4-204ENST00000493669 ZFYVE26Q68DK2 2539 aa8.32□□□□□ -1.08
PHACTR4-204ENST00000493669 HAX1O00165 279 aa8.31□□□□□ -1.08
PHACTR4-204ENST00000493669 NUPR1O60356 82 aa8.31□□□□□ -1.08
PHACTR4-204ENST00000493669 TGFAP01135 160 aa8.31□□□□□ -1.08
PHACTR4-204ENST00000493669 CFHR3Q02985 330 aa8.31□□□□□ -1.08
PHACTR4-204ENST00000493669 GDF5OSQ5U4N7 250 aa8.31□□□□□ -1.08
PHACTR4-204ENST00000493669 LCN12Q6JVE5 192 aa8.31□□□□□ -1.08
PHACTR4-204ENST00000493669 PRR25Q96S07 402 aa8.31□□□□□ -1.08
PHACTR4-204ENST00000493669 ASH1LQ9NR48 2969 aaKnown RBP8.31□□□□□ -1.08
PHACTR4-204ENST00000493669 TMEM89A2RUT3 159 aa8.31□□□□□ -1.08
PHACTR4-204ENST00000493669 BLCAPP62952 87 aa8.31□□□□□ -1.08
PHACTR4-204ENST00000493669 SRSF2Q01130 221 aaKnown RBP8.31□□□□□ -1.08
PHACTR4-204ENST00000493669 FAM162BQ5T6X4 162 aa8.31□□□□□ -1.08
PHACTR4-204ENST00000493669 PGLYRP4Q96LB8 373 aa8.31□□□□□ -1.08
PHACTR4-204ENST00000493669 NDFIP1Q9BT67 221 aa8.31□□□□□ -1.08
PHACTR4-204ENST00000493669 IGHV3OR16-8A0A075B7F1 116 aa8.31□□□□□ -1.08
PHACTR4-204ENST00000493669 IGKV2-40A0A087WW87 121 aaPredicted RBP8.31□□□□□ -1.08
PHACTR4-204ENST00000493669 IGKV2D-40P01614 121 aaPredicted RBP8.31□□□□□ -1.08
PHACTR4-204ENST00000493669 CRIP1P50238 77 aa8.31□□□□□ -1.08
PHACTR4-204ENST00000493669 IQCJQ1A5X6 159 aa8.31□□□□□ -1.08
PHACTR4-204ENST00000493669 DEFB112Q30KQ8 113 aa8.31□□□□□ -1.08
PHACTR4-204ENST00000493669 KIAA1644Q3SXP7 199 aa8.31□□□□□ -1.08
PHACTR4-204ENST00000493669 GATD1Q8NB37 220 aa8.31□□□□□ -1.08
PHACTR4-204ENST00000493669 KCNS1Q96KK3 526 aa8.31□□□□□ -1.08
PHACTR4-204ENST00000493669 IGHV4-31P0DP07 118 aa8.3□□□□□ -1.08
PHACTR4-204ENST00000493669 BMI1P35226 326 aa8.3□□□□□ -1.08
PHACTR4-204ENST00000493669 CAMPP49913 170 aa8.3□□□□□ -1.08
PHACTR4-204ENST00000493669 RPS20P60866 119 aaKnown RBP8.3□□□□□ -1.08
PHACTR4-204ENST00000493669 PRSS57Q6UWY2 283 aa8.3□□□□□ -1.08
PHACTR4-204ENST00000493669 PRDM13Q9H4Q3 707 aa8.3□□□□□ -1.08
PHACTR4-204ENST00000493669 A0A1B0GUT8 65 aa8.3□□□□□ -1.08
PHACTR4-204ENST00000493669 APOHP02749 345 aaPredicted RBP8.3□□□□□ -1.08
PHACTR4-204ENST00000493669 PF4V1P10720 104 aa8.3□□□□□ -1.08
PHACTR4-204ENST00000493669 RIGQ13278 110 aa8.3□□□□□ -1.08
PHACTR4-204ENST00000493669 C8orf49Q96NF6 230 aa8.3□□□□□ -1.08
PHACTR4-204ENST00000493669 RNF223E7ERA6 249 aa8.29□□□□□ -1.08
PHACTR4-204ENST00000493669 CDPF1Q6NVV7 123 aa8.29□□□□□ -1.08
PHACTR4-204ENST00000493669 C18orf32Q8TCD1 76 aa8.29□□□□□ -1.08
PHACTR4-204ENST00000493669 GLMPQ8WWB7 406 aa8.29□□□□□ -1.08
PHACTR4-204ENST00000493669 ALKBH7Q9BT30 221 aaPredicted RBP8.29□□□□□ -1.08
PHACTR4-204ENST00000493669 SAMD10Q9BYL1 202 aa8.29□□□□□ -1.08
PHACTR4-204ENST00000493669 A0A1W2PS18 150 aa8.29□□□□□ -1.08
PHACTR4-204ENST00000493669 Q5PR19 223 aa8.29□□□□□ -1.08
PHACTR4-204ENST00000493669 Q71RC1 249 aaPredicted RBP8.29□□□□□ -1.08
PHACTR4-204ENST00000493669 BORCS7Q96B45 105 aa8.29□□□□□ -1.08
PHACTR4-204ENST00000493669 FAM208BQ5VWN6 2430 aa8.29□□□□□ -1.08
PHACTR4-204ENST00000493669 TMEM189A5PLL7 270 aa8.28□□□□□ -1.08
PHACTR4-204ENST00000493669 SH2D1AO60880 128 aa8.28□□□□□ -1.08
PHACTR4-204ENST00000493669 IGHV4-59P01825 116 aa8.28□□□□□ -1.08
PHACTR4-204ENST00000493669 PKIAP61925 76 aa8.28□□□□□ -1.08
PHACTR4-204ENST00000493669 DMRTA1Q5VZB9 504 aa8.28□□□□□ -1.08
PHACTR4-204ENST00000493669 C8orf86Q6ZUL3 223 aa8.28□□□□□ -1.08
PHACTR4-204ENST00000493669 VGLL1Q99990 258 aa8.28□□□□□ -1.08
PHACTR4-204ENST00000493669 LRRK2Q5S007 2527 aa8.28□□□□□ -1.08
PHACTR4-204ENST00000493669 F2Z2F3 143 aa8.28□□□□□ -1.08
PHACTR4-204ENST00000493669 GPX1P07203 203 aa8.28□□□□□ -1.08
PHACTR4-204ENST00000493669 KRTAP10-9P60411 292 aa8.28□□□□□ -1.08
PHACTR4-204ENST00000493669 SIGLECL1Q8N7X8 197 aa8.28□□□□□ -1.08
PHACTR4-204ENST00000493669 OR4X2Q8NGF9 303 aa8.28□□□□□ -1.08
PHACTR4-204ENST00000493669 PPP1R14DQ9NXH3 145 aa8.28□□□□□ -1.08
PHACTR4-204ENST00000493669 HLA-DMBP28068 263 aa8.28□□□□□ -1.08
PHACTR4-204ENST00000493669 CYB5R2Q6BCY4 276 aa8.28□□□□□ -1.08
PHACTR4-204ENST00000493669 SSBP4Q9BWG4 385 aaPredicted RBP8.28□□□□□ -1.08
PHACTR4-204ENST00000493669 TRAV8-2A0A0B4J237 113 aa8.27□□□□□ -1.09
PHACTR4-204ENST00000493669 ZNF705FA8MVS1 300 aaPredicted RBP8.27□□□□□ -1.09
PHACTR4-204ENST00000493669 Q6ZS46 218 aa8.27□□□□□ -1.09
PHACTR4-204ENST00000493669 NPFFR1Q9GZQ6 430 aa8.27□□□□□ -1.09
PHACTR4-204ENST00000493669 KLK15Q9H2R5 256 aa8.27□□□□□ -1.09
PHACTR4-204ENST00000493669 VPREB3Q9UKI3 123 aa8.27□□□□□ -1.09
PHACTR4-204ENST00000493669 ANKRD17O75179 2603 aaKnown RBP8.27□□□□□ -1.09
PHACTR4-204ENST00000493669 IGHV3-66A0A0C4DH42 116 aa8.27□□□□□ -1.09
PHACTR4-204ENST00000493669 TSTD3H0UI37 97 aa8.27□□□□□ -1.09
PHACTR4-204ENST00000493669 ZNF207O43670 478 aaKnown RBP8.27□□□□□ -1.09
PHACTR4-204ENST00000493669 ZNF324O75467 553 aaPredicted RBP8.27□□□□□ -1.09
PHACTR4-204ENST00000493669 Q6YL49 198 aa8.27□□□□□ -1.09
PHACTR4-204ENST00000493669 RCHY1Q96PM5 261 aa8.27□□□□□ -1.09
PHACTR4-204ENST00000493669 LOC102724200A0A096LPH7 203 aaPredicted RBP8.26□□□□□ -1.09
PHACTR4-204ENST00000493669 LINC00587B1AMM8 73 aa8.26□□□□□ -1.09
PHACTR4-204ENST00000493669 TRBV12-3P01733 135 aa8.26□□□□□ -1.09
PHACTR4-204ENST00000493669 PSMB8P28062 276 aa8.26□□□□□ -1.09
PHACTR4-204ENST00000493669 IGFL4Q6B9Z1 124 aa8.26□□□□□ -1.09
PHACTR4-204ENST00000493669 Q6ZWC4 215 aa8.26□□□□□ -1.09
PHACTR4-204ENST00000493669 NAGKQ9UJ70 344 aa8.26□□□□□ -1.09
PHACTR4-204ENST00000493669 UNQ9165/PRO28630Q6UXU0 137 aa8.26□□□□□ -1.09
PHACTR4-204ENST00000493669 C9orf47Q6ZRZ4 202 aa8.26□□□□□ -1.09
PHACTR4-204ENST00000493669 Q8TAT8 98 aa8.26□□□□□ -1.09
PHACTR4-204ENST00000493669 ASCL2Q99929 193 aa8.26□□□□□ -1.09
PHACTR4-204ENST00000493669 IGHV3OR16-13A0A075B7E8 117 aa8.26□□□□□ -1.09
PHACTR4-204ENST00000493669 IGHV3-74A0A0B4J1X5 117 aa8.26□□□□□ -1.09
PHACTR4-204ENST00000493669 FABP5P3A8MUU1 101 aa8.26□□□□□ -1.09
PHACTR4-204ENST00000493669 K7EMT4 169 aa8.26□□□□□ -1.09
PHACTR4-204ENST00000493669 ARMS2P0C7Q2 107 aa8.26□□□□□ -1.09
PHACTR4-204ENST00000493669 AMTP48728 403 aa8.26□□□□□ -1.09
PHACTR4-204ENST00000493669 TMEM78Q5T7P6 136 aa8.26□□□□□ -1.09
PHACTR4-204ENST00000493669 ZNF493Q6ZR52 646 aa8.26□□□□□ -1.09
PHACTR4-204ENST00000493669 RNF182Q8N6D2 247 aa8.26□□□□□ -1.09
PHACTR4-204ENST00000493669 PEF1Q9UBV8 284 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms