RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 FAM236DA0A1B0GTK5 79 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 A0A1W2PRX2 142 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 TIMM8AO60220 97 aaPredicted RBP5.47□□□□□ -1.53
VPS13B-205ENST00000493587 COX7A2P2O60397 106 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 FAM236CP0DP71 79 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 LEPP41159 167 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 EDDM3AQ14507 147 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 Q6ZSR3 168 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 ORMDL3Q8N138 153 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 BAALCQ8WXS3 180 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 SLC25A2Q9BXI2 301 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 IFI27L2Q9H2X8 130 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 ALKBH4Q9NXW9 302 aa5.47□□□□□ -1.53
VPS13B-205ENST00000493587 H3BTX0 84 aa5.46□□□□□ -1.53
VPS13B-205ENST00000493587 FCGR3BO75015 233 aa5.46□□□□□ -1.53
VPS13B-205ENST00000493587 PATE4P0C8F1 98 aa5.46□□□□□ -1.53
VPS13B-205ENST00000493587 MALP21145 153 aa5.46□□□□□ -1.53
VPS13B-205ENST00000493587 RSPO1Q2MKA7 263 aaPredicted RBP5.46□□□□□ -1.53
VPS13B-205ENST00000493587 ODF3Q96PU9 254 aa5.46□□□□□ -1.53
VPS13B-205ENST00000493587 HS3ST6Q96QI5 342 aa5.46□□□□□ -1.53
VPS13B-205ENST00000493587 SMKR1H3BMG3 65 aa5.46□□□□□ -1.54
VPS13B-205ENST00000493587 KLRB1Q12918 225 aa5.46□□□□□ -1.54
VPS13B-205ENST00000493587 FAM186AA6NE01 2351 aa5.46□□□□□ -1.54
VPS13B-205ENST00000493587 FAM90A5PA8MXJ8 464 aa5.46□□□□□ -1.54
VPS13B-205ENST00000493587 TMEM150CB9EJG8 249 aa5.46□□□□□ -1.54
VPS13B-205ENST00000493587 TIMM23O14925 209 aa5.46□□□□□ -1.54
VPS13B-205ENST00000493587 TNFAIP6P98066 277 aaPredicted RBP5.46□□□□□ -1.54
VPS13B-205ENST00000493587 C1orf195Q5TG92 126 aa5.46□□□□□ -1.54
VPS13B-205ENST00000493587 VKORC1L1Q8N0U8 176 aa5.46□□□□□ -1.54
VPS13B-205ENST00000493587 ZNRF2Q8NHG8 242 aa5.46□□□□□ -1.54
VPS13B-205ENST00000493587 LINC00526Q96FQ7 95 aa5.46□□□□□ -1.54
VPS13B-205ENST00000493587 VKORC1Q9BQB6 163 aa5.46□□□□□ -1.54
VPS13B-205ENST00000493587 TRAV13-1A0A0B4J241 112 aa5.45□□□□□ -1.54
VPS13B-205ENST00000493587 LINC00205P59089 165 aa5.45□□□□□ -1.54
VPS13B-205ENST00000493587 FGF12P61328 243 aa5.45□□□□□ -1.54
VPS13B-205ENST00000493587 RPS28P62857 69 aaKnown RBP5.45□□□□□ -1.54
VPS13B-205ENST00000493587 CEMP1Q6PRD7 247 aaPredicted RBP5.45□□□□□ -1.54
VPS13B-205ENST00000493587 C10orf105Q8TEF2 133 aa5.45□□□□□ -1.54
VPS13B-205ENST00000493587 A0A096LNJ9 63 aa5.45□□□□□ -1.54
VPS13B-205ENST00000493587 ZNF815PA8K554 130 aa5.45□□□□□ -1.54
VPS13B-205ENST00000493587 LY6DQ14210 128 aa5.45□□□□□ -1.54
VPS13B-205ENST00000493587 SPRNQ5BIV9 151 aa5.45□□□□□ -1.54
VPS13B-205ENST00000493587 C2orf82Q6UX34 121 aa5.45□□□□□ -1.54
VPS13B-205ENST00000493587 PRNTQ86SH4 94 aa5.45□□□□□ -1.54
VPS13B-205ENST00000493587 MYOZ3Q8TDC0 251 aa5.45□□□□□ -1.54
VPS13B-205ENST00000493587 MRPL35Q9NZE8 188 aaKnown RBP5.45□□□□□ -1.54
VPS13B-205ENST00000493587 NPIPB13A6NJU9 1138 aa5.44□□□□□ -1.54
VPS13B-205ENST00000493587 DEFB108AA8MXU0 73 aa5.44□□□□□ -1.54
VPS13B-205ENST00000493587 NPIPB4C9JG80 1138 aa5.44□□□□□ -1.54
VPS13B-205ENST00000493587 ZNHIT1O43257 154 aa5.44□□□□□ -1.54
VPS13B-205ENST00000493587 PRB4P10163 310 aaPredicted RBP5.44□□□□□ -1.54
VPS13B-205ENST00000493587 GUSBP11Q6P575 273 aa5.44□□□□□ -1.54
VPS13B-205ENST00000493587 TMEM105Q8N8V8 129 aa5.44□□□□□ -1.54
VPS13B-205ENST00000493587 WFDC11Q8NEX6 87 aa5.44□□□□□ -1.54
VPS13B-205ENST00000493587 SIRPDQ9H106 197 aa5.44□□□□□ -1.54
VPS13B-205ENST00000493587 IGHV3-43A0A0B4J1X8 118 aa5.44□□□□□ -1.54
VPS13B-205ENST00000493587 IGHV3-64DA0A0J9YX35 117 aa5.44□□□□□ -1.54
VPS13B-205ENST00000493587 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.44□□□□□ -1.54
VPS13B-205ENST00000493587 IGHV3-43DP0DP04 118 aa5.44□□□□□ -1.54
VPS13B-205ENST00000493587 TMEM170BQ5T4T1 132 aa5.44□□□□□ -1.54
VPS13B-205ENST00000493587 LINC00322Q6ZN03 302 aaPredicted RBP5.44□□□□□ -1.54
VPS13B-205ENST00000493587 SPANXCQ9NY87 97 aa5.44□□□□□ -1.54
VPS13B-205ENST00000493587 PLXNB1O43157 2135 aa5.44□□□□□ -1.54
VPS13B-205ENST00000493587 IGHV3OR15-7A0A075B7D8 119 aa5.44□□□□□ -1.54
VPS13B-205ENST00000493587 PATE3B3GLJ2 98 aa5.44□□□□□ -1.54
VPS13B-205ENST00000493587 CNTFRP26992 372 aa5.44□□□□□ -1.54
VPS13B-205ENST00000493587 PFN2P35080 140 aa5.44□□□□□ -1.54
VPS13B-205ENST00000493587 IL17RELQ6ZVW7 336 aa5.44□□□□□ -1.54
VPS13B-205ENST00000493587 MBD3L2Q8NHZ7 208 aaPredicted RBP5.44□□□□□ -1.54
VPS13B-205ENST00000493587 SLC25A39Q9BZJ4 359 aaPredicted RBP5.44□□□□□ -1.54
VPS13B-205ENST00000493587 TRBV7-3A0A075B6L6 115 aa5.43□□□□□ -1.54
VPS13B-205ENST00000493587 IGHV5-10-1A0A0J9YXX1 117 aa5.43□□□□□ -1.54
VPS13B-205ENST00000493587 M0R2P5 195 aa5.43□□□□□ -1.54
VPS13B-205ENST00000493587 MRPS12O15235 138 aaKnown RBP5.43□□□□□ -1.54
VPS13B-205ENST00000493587 IGLV3-1P01715 115 aa5.43□□□□□ -1.54
VPS13B-205ENST00000493587 MYCNOSP40205 109 aa5.43□□□□□ -1.54
VPS13B-205ENST00000493587 SSR4P51571 173 aa5.43□□□□□ -1.54
VPS13B-205ENST00000493587 EFNA4P52798 201 aa5.43□□□□□ -1.54
VPS13B-205ENST00000493587 CRIP2P52943 208 aaPredicted RBP5.43□□□□□ -1.54
VPS13B-205ENST00000493587 TCF15Q12870 199 aa5.43□□□□□ -1.54
VPS13B-205ENST00000493587 SLC25A48Q6ZT89 311 aaKnown RBP5.43□□□□□ -1.54
VPS13B-205ENST00000493587 DCHS1Q96JQ0 3298 aa5.43□□□□□ -1.54
VPS13B-205ENST00000493587 FAM90A10PA6NDY2 464 aa5.43□□□□□ -1.54
VPS13B-205ENST00000493587 FAM90A20PA6NIJ5 464 aa5.43□□□□□ -1.54
VPS13B-205ENST00000493587 FAM90A7PA6NKC0 464 aa5.43□□□□□ -1.54
VPS13B-205ENST00000493587 FAM90A22PA8MWA6 464 aa5.43□□□□□ -1.54
VPS13B-205ENST00000493587 FAM90A12PA8MX19 464 aa5.43□□□□□ -1.54
VPS13B-205ENST00000493587 FAM90A23PA8MXZ1 464 aa5.43□□□□□ -1.54
VPS13B-205ENST00000493587 NTN3O00634 580 aaPredicted RBP5.43□□□□□ -1.54
VPS13B-205ENST00000493587 FAM90A15PP0C7V4 464 aa5.43□□□□□ -1.54
VPS13B-205ENST00000493587 FAM90A13PP0C7W8 464 aa5.43□□□□□ -1.54
VPS13B-205ENST00000493587 FAM90A14PP0C7W9 464 aa5.43□□□□□ -1.54
VPS13B-205ENST00000493587 FAM90A24PP0C7X0 464 aa5.43□□□□□ -1.54
VPS13B-205ENST00000493587 KRTAP27-1Q3LI81 207 aa5.43□□□□□ -1.54
VPS13B-205ENST00000493587 ZNF329Q86UD4 541 aa5.43□□□□□ -1.54
VPS13B-205ENST00000493587 DPH3Q96FX2 82 aa5.43□□□□□ -1.54
VPS13B-205ENST00000493587 HHLA3Q9XRX5 114 aa5.43□□□□□ -1.54
VPS13B-205ENST00000493587 FREM1Q5H8C1 2179 aa5.43□□□□□ -1.54
VPS13B-205ENST00000493587 LGALS1P09382 135 aaKnown RBP5.43□□□□□ -1.54
VPS13B-205ENST00000493587 COX7CP15954 63 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms