RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 LYPD1Q8N2G4 141 aa5.99□□□□□ -1.45
TM4SF1-204ENST00000493348 STOML3Q8TAV4 291 aa5.99□□□□□ -1.45
TM4SF1-204ENST00000493348 ST6GAL2Q96JF0 529 aa5.99□□□□□ -1.45
TM4SF1-204ENST00000493348 C20orf173Q96LM9 149 aa5.99□□□□□ -1.45
TM4SF1-204ENST00000493348 C17orf77Q96MU5 243 aa5.99□□□□□ -1.45
TM4SF1-204ENST00000493348 RARRES2Q99969 163 aa5.99□□□□□ -1.45
TM4SF1-204ENST00000493348 SH3BGRL3Q9H299 93 aa5.99□□□□□ -1.45
TM4SF1-204ENST00000493348 RETNQ9HD89 108 aa5.99□□□□□ -1.45
TM4SF1-204ENST00000493348 ZNF586Q9NXT0 402 aa5.99□□□□□ -1.45
TM4SF1-204ENST00000493348 XCL2Q9UBD3 114 aa5.99□□□□□ -1.45
TM4SF1-204ENST00000493348 COL7A1Q02388 2944 aa5.99□□□□□ -1.45
TM4SF1-204ENST00000493348 TRAV8-2A0A0B4J237 113 aa5.98□□□□□ -1.45
TM4SF1-204ENST00000493348 CTXND1A0A1B0GTU2 59 aa5.98□□□□□ -1.45
TM4SF1-204ENST00000493348 F6UB75 175 aa5.98□□□□□ -1.45
TM4SF1-204ENST00000493348 G3V3Q6 166 aa5.98□□□□□ -1.45
TM4SF1-204ENST00000493348 TEX46H3BTG2 121 aa5.98□□□□□ -1.45
TM4SF1-204ENST00000493348 SLC17A3O00476 420 aa5.98□□□□□ -1.45
TM4SF1-204ENST00000493348 HMGB3O15347 200 aaKnown RBP5.98□□□□□ -1.45
TM4SF1-204ENST00000493348 TSPOP30536 169 aa5.98□□□□□ -1.45
TM4SF1-204ENST00000493348 CNN1P51911 297 aaKnown RBP5.98□□□□□ -1.45
TM4SF1-204ENST00000493348 FXYD7P58549 80 aa5.98□□□□□ -1.45
TM4SF1-204ENST00000493348 RANP62826 216 aaKnown RBP5.98□□□□□ -1.45
TM4SF1-204ENST00000493348 ICAM4Q14773 271 aa5.98□□□□□ -1.45
TM4SF1-204ENST00000493348 TMEM78Q5T7P6 136 aa5.98□□□□□ -1.45
TM4SF1-204ENST00000493348 GDF5OSQ5U4N7 250 aa5.98□□□□□ -1.45
TM4SF1-204ENST00000493348 OR11H4Q8NGC9 324 aa5.98□□□□□ -1.45
TM4SF1-204ENST00000493348 OR8A1Q8NGG7 326 aa5.98□□□□□ -1.45
TM4SF1-204ENST00000493348 OR11H2Q8NH07 326 aa5.98□□□□□ -1.45
TM4SF1-204ENST00000493348 IL17DQ8TAD2 202 aa5.98□□□□□ -1.45
TM4SF1-204ENST00000493348 RXFP4Q8TDU9 374 aa5.98□□□□□ -1.45
TM4SF1-204ENST00000493348 RAB24Q969Q5 203 aa5.98□□□□□ -1.45
TM4SF1-204ENST00000493348 RNF183Q96D59 192 aa5.98□□□□□ -1.45
TM4SF1-204ENST00000493348 MRPL53Q96EL3 112 aaKnown RBP5.98□□□□□ -1.45
TM4SF1-204ENST00000493348 WWC2-AS2Q96NR7 200 aa5.98□□□□□ -1.45
TM4SF1-204ENST00000493348 TMEM167BQ9NRX6 74 aa5.98□□□□□ -1.45
TM4SF1-204ENST00000493348 GOLT1BQ9Y3E0 138 aa5.98□□□□□ -1.45
TM4SF1-204ENST00000493348 IGHV3OR16-12A0A075B7B8 117 aa5.97□□□□□ -1.45
TM4SF1-204ENST00000493348 ZNF705FA8MVS1 300 aaPredicted RBP5.97□□□□□ -1.45
TM4SF1-204ENST00000493348 UMAD1C9J7I0 102 aa5.97□□□□□ -1.45
TM4SF1-204ENST00000493348 BOLA2-SMG1P6H3BVE0 249 aa5.97□□□□□ -1.45
TM4SF1-204ENST00000493348 K7EQM0 130 aa5.97□□□□□ -1.45
TM4SF1-204ENST00000493348 INSP01308 110 aa5.97□□□□□ -1.45
TM4SF1-204ENST00000493348 SEC11BP0C7V7 166 aa5.97□□□□□ -1.45
TM4SF1-204ENST00000493348 ZNF705DP0CH99 300 aaPredicted RBP5.97□□□□□ -1.45
TM4SF1-204ENST00000493348 ZNF705BP0CI00 300 aaPredicted RBP5.97□□□□□ -1.45
TM4SF1-204ENST00000493348 ARL14EPLP0DKL9 152 aa5.97□□□□□ -1.45
TM4SF1-204ENST00000493348 HLA-DMBP28068 263 aa5.97□□□□□ -1.45
TM4SF1-204ENST00000493348 LEPP41159 167 aa5.97□□□□□ -1.45
TM4SF1-204ENST00000493348 DEFB1P60022 68 aa5.97□□□□□ -1.45
TM4SF1-204ENST00000493348 BAP18Q8IXM2 172 aa5.97□□□□□ -1.45
TM4SF1-204ENST00000493348 EXOC3-AS1Q8N2X6 119 aa5.97□□□□□ -1.45
TM4SF1-204ENST00000493348 FXYD5Q96DB9 178 aa5.97□□□□□ -1.45
TM4SF1-204ENST00000493348 SAT2Q96F10 170 aaPredicted RBP5.97□□□□□ -1.45
TM4SF1-204ENST00000493348 FAM167A-AS1Q96KT0 104 aa5.97□□□□□ -1.45
TM4SF1-204ENST00000493348 CLUHP3Q96NS8 147 aa5.97□□□□□ -1.45
TM4SF1-204ENST00000493348 OVOL2Q9BRP0 275 aa5.97□□□□□ -1.45
TM4SF1-204ENST00000493348 Q9H3A6 140 aa5.97□□□□□ -1.45
TM4SF1-204ENST00000493348 RPH3ALQ9UNE2 315 aa5.97□□□□□ -1.45
TM4SF1-204ENST00000493348 RFNGQ9Y644 331 aa5.97□□□□□ -1.45
TM4SF1-204ENST00000493348 PGPA6NDG6 321 aa5.96□□□□□ -1.46
TM4SF1-204ENST00000493348 STAG3L2P0CL84 134 aa5.96□□□□□ -1.46
TM4SF1-204ENST00000493348 STAG3L3P0CL85 134 aa5.96□□□□□ -1.46
TM4SF1-204ENST00000493348 SPINK13Q1W4C9 94 aa5.96□□□□□ -1.46
TM4SF1-204ENST00000493348 DPPA3Q6W0C5 159 aa5.96□□□□□ -1.46
TM4SF1-204ENST00000493348 SLC51BQ86UW2 128 aa5.96□□□□□ -1.46
TM4SF1-204ENST00000493348 RPP25LQ8N5L8 163 aaKnown RBP5.96□□□□□ -1.46
TM4SF1-204ENST00000493348 FAM213BQ8TBF2 198 aa5.96□□□□□ -1.46
TM4SF1-204ENST00000493348 PHYHIPLQ96FC7 376 aa5.96□□□□□ -1.46
TM4SF1-204ENST00000493348 SLC35B3Q9H1N7 401 aa5.96□□□□□ -1.46
TM4SF1-204ENST00000493348 OTORQ9NRC9 128 aa5.96□□□□□ -1.46
TM4SF1-204ENST00000493348 CYTL1Q9NRR1 136 aa5.96□□□□□ -1.46
TM4SF1-204ENST00000493348 MAP1LC3B2A6NCE7 125 aa5.95□□□□□ -1.46
TM4SF1-204ENST00000493348 M0R2Z0 102 aa5.95□□□□□ -1.46
TM4SF1-204ENST00000493348 M0R3E3 92 aa5.95□□□□□ -1.46
TM4SF1-204ENST00000493348 EIF3GO75821 320 aaKnown RBP eCLIP5.95□□□□□ -1.46
TM4SF1-204ENST00000493348 HBE1P02100 147 aa5.95□□□□□ -1.46
TM4SF1-204ENST00000493348 SLC25A5P05141 298 aaKnown RBP5.95□□□□□ -1.46
TM4SF1-204ENST00000493348 MIFP14174 115 aa5.95□□□□□ -1.46
TM4SF1-204ENST00000493348 GCHFRP30047 84 aa5.95□□□□□ -1.46
TM4SF1-204ENST00000493348 CDKN1BP46527 198 aa5.95□□□□□ -1.46
TM4SF1-204ENST00000493348 RAB5CP51148 216 aa5.95□□□□□ -1.46
TM4SF1-204ENST00000493348 LGALSLQ3ZCW2 172 aaPredicted RBP5.95□□□□□ -1.46
TM4SF1-204ENST00000493348 TMEM256Q8N2U0 113 aa5.95□□□□□ -1.46
TM4SF1-204ENST00000493348 IGF2BP2-AS1Q96M15 143 aa5.95□□□□□ -1.46
TM4SF1-204ENST00000493348 LINC00477Q96M19 166 aa5.95□□□□□ -1.46
TM4SF1-204ENST00000493348 NIPSNAP3BQ9BS92 247 aa5.95□□□□□ -1.46
TM4SF1-204ENST00000493348 NKX6-2Q9C056 277 aaPredicted RBP5.95□□□□□ -1.46
TM4SF1-204ENST00000493348 MAP1LC3BQ9GZQ8 125 aa5.95□□□□□ -1.46
TM4SF1-204ENST00000493348 HUWE1Q7Z6Z7 4374 aaKnown RBP5.94□□□□□ -1.46
TM4SF1-204ENST00000493348 A0A0J9YWU9 116 aa5.94□□□□□ -1.46
TM4SF1-204ENST00000493348 A0A1B0GVG6 124 aa5.94□□□□□ -1.46
TM4SF1-204ENST00000493348 TMEM189A5PLL7 270 aa5.94□□□□□ -1.46
TM4SF1-204ENST00000493348 SMIM9A6NGZ8 99 aa5.94□□□□□ -1.46
TM4SF1-204ENST00000493348 J3KRW8 73 aa5.94□□□□□ -1.46
TM4SF1-204ENST00000493348 NDUFB4O95168 129 aa5.94□□□□□ -1.46
TM4SF1-204ENST00000493348 IFNA7P01567 189 aa5.94□□□□□ -1.46
TM4SF1-204ENST00000493348 GPX1P07203 203 aa5.94□□□□□ -1.46
TM4SF1-204ENST00000493348 H2AFB1P0C5Y9 115 aa5.94□□□□□ -1.46
TM4SF1-204ENST00000493348 PPT1P50897 306 aa5.94□□□□□ -1.46
TM4SF1-204ENST00000493348 SFT2D1Q8WV19 159 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms