RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 PROK2Q9HC23 129 aa13.09□□□□□ -0.31
BRAT1-206ENST00000493232 ESDP10768 282 aa13.09□□□□□ -0.31
BRAT1-206ENST00000493232 CR1LQ2VPA4 569 aa13.09□□□□□ -0.31
BRAT1-206ENST00000493232 MRPL52Q86TS9 123 aaKnown RBP13.09□□□□□ -0.31
BRAT1-206ENST00000493232 SPXQ9BT56 116 aa13.09□□□□□ -0.31
BRAT1-206ENST00000493232 ZNRD1Q9P1U0 126 aa13.09□□□□□ -0.31
BRAT1-206ENST00000493232 KLF12Q9Y4X4 402 aa13.09□□□□□ -0.31
BRAT1-206ENST00000493232 C17orf58Q2M2W7 97 aa13.08□□□□□ -0.31
BRAT1-206ENST00000493232 TRBV25-1A0A075B6N4 114 aa13.08□□□□□ -0.32
BRAT1-206ENST00000493232 IGLV1-44P01699 117 aa13.08□□□□□ -0.32
BRAT1-206ENST00000493232 MST1LQ2TV78 715 aa13.08□□□□□ -0.32
BRAT1-206ENST00000493232 IGHV1OR15-1A0A075B7D0 117 aa13.08□□□□□ -0.32
BRAT1-206ENST00000493232 LINC00479Q96M42 142 aa13.08□□□□□ -0.32
BRAT1-206ENST00000493232 Q0VG73 95 aa13.07□□□□□ -0.32
BRAT1-206ENST00000493232 GAGE2BQ13066 116 aa13.07□□□□□ -0.32
BRAT1-206ENST00000493232 SPINK13Q1W4C9 94 aa13.07□□□□□ -0.32
BRAT1-206ENST00000493232 GAGE2EQ4V326 116 aa13.07□□□□□ -0.32
BRAT1-206ENST00000493232 GAGE2DQ9UEU5 116 aa13.07□□□□□ -0.32
BRAT1-206ENST00000493232 SIP14410 1827 aa13.07□□□□□ -0.32
BRAT1-206ENST00000493232 PLXNA3P51805 1871 aa13.07□□□□□ -0.32
BRAT1-206ENST00000493232 G3V318 75 aa13.07□□□□□ -0.32
BRAT1-206ENST00000493232 J3QKU1 62 aa13.07□□□□□ -0.32
BRAT1-206ENST00000493232 APOC4P55056 127 aa13.07□□□□□ -0.32
BRAT1-206ENST00000493232 TMEM14CQ9P0S9 112 aa13.07□□□□□ -0.32
BRAT1-206ENST00000493232 F5H768 121 aa13.07□□□□□ -0.32
BRAT1-206ENST00000493232 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.07□□□□□ -0.32
BRAT1-206ENST00000493232 I3L3M4 83 aa13.07□□□□□ -0.32
BRAT1-206ENST00000493232 ZSWIM8A7E2V4 1837 aa13.06□□□□□ -0.32
BRAT1-206ENST00000493232 CHAC1Q9BUX1 264 aa13.06□□□□□ -0.32
BRAT1-206ENST00000493232 NCOR1O75376 2440 aa13.06□□□□□ -0.32
BRAT1-206ENST00000493232 ANK1P16157 1881 aa13.06□□□□□ -0.32
BRAT1-206ENST00000493232 IGLV3-9A0A075B6K5 115 aa13.06□□□□□ -0.32
BRAT1-206ENST00000493232 A0A087X0K7 114 aa13.06□□□□□ -0.32
BRAT1-206ENST00000493232 VWC2LB2RUY7 222 aa13.06□□□□□ -0.32
BRAT1-206ENST00000493232 SSBP2P81877 361 aaPredicted RBP13.06□□□□□ -0.32
BRAT1-206ENST00000493232 GAGE12JA6NER3 117 aa13.06□□□□□ -0.32
BRAT1-206ENST00000493232 GAGE1Q13065 139 aa13.06□□□□□ -0.32
BRAT1-206ENST00000493232 GAGE4Q13068 117 aa13.06□□□□□ -0.32
BRAT1-206ENST00000493232 GAGE5Q13069 117 aa13.06□□□□□ -0.32
BRAT1-206ENST00000493232 FAM104BQ5XKR9 115 aa13.06□□□□□ -0.32
BRAT1-206ENST00000493232 C8orf86Q6ZUL3 223 aa13.06□□□□□ -0.32
BRAT1-206ENST00000493232 TP53TG1Q9Y2A0 90 aa13.06□□□□□ -0.32
BRAT1-206ENST00000493232 Q8N8P6 123 aa13.06□□□□□ -0.32
BRAT1-206ENST00000493232 ZNF561-AS1K7EIQ3 104 aa13.05□□□□□ -0.32
BRAT1-206ENST00000493232 LRRK1Q38SD2 2015 aa13.05□□□□□ -0.32
BRAT1-206ENST00000493232 MED12Q93074 2177 aa13.05□□□□□ -0.32
BRAT1-206ENST00000493232 H3BRN7 92 aa13.05□□□□□ -0.32
BRAT1-206ENST00000493232 TCTEX1D4Q5JR98 221 aa13.05□□□□□ -0.32
BRAT1-206ENST00000493232 WDR86Q86TI4 376 aa13.05□□□□□ -0.32
BRAT1-206ENST00000493232 HAPLN4Q86UW8 402 aa13.05□□□□□ -0.32
BRAT1-206ENST00000493232 CACNA1GO43497 2377 aa13.05□□□□□ -0.32
BRAT1-206ENST00000493232 KNCNA6PVL3 124 aa13.04□□□□□ -0.32
BRAT1-206ENST00000493232 AZU1P20160 251 aa13.04□□□□□ -0.32
BRAT1-206ENST00000493232 HIST1H4AP62805 103 aaKnown RBP13.04□□□□□ -0.32
BRAT1-206ENST00000493232 MPV17L2Q567V2 206 aa13.04□□□□□ -0.32
BRAT1-206ENST00000493232 TMEM213A2RRL7 107 aa13.04□□□□□ -0.32
BRAT1-206ENST00000493232 CDKN1BP46527 198 aa13.04□□□□□ -0.32
BRAT1-206ENST00000493232 C1orf147Q96MC9 270 aaPredicted RBP13.04□□□□□ -0.32
BRAT1-206ENST00000493232 C8orf49Q96NF6 230 aa13.04□□□□□ -0.32
BRAT1-206ENST00000493232 E9PQ18 207 aa13.04□□□□□ -0.32
BRAT1-206ENST00000493232 ELANEP08246 267 aa13.04□□□□□ -0.32
BRAT1-206ENST00000493232 KIR3DS1Q14943 382 aa13.04□□□□□ -0.32
BRAT1-206ENST00000493232 C2orf66Q6UXQ4 117 aa13.04□□□□□ -0.32
BRAT1-206ENST00000493232 ZFAND6Q6FIF0 208 aa13.04□□□□□ -0.32
BRAT1-206ENST00000493232 MAPK1IP1LQ8NDC0 245 aa13.03□□□□□ -0.32
BRAT1-206ENST00000493232 MYO7BQ6PIF6 2116 aa13.03□□□□□ -0.32
BRAT1-206ENST00000493232 DOPEY2Q9Y3R5 2298 aa13.03□□□□□ -0.32
BRAT1-206ENST00000493232 NAA38Q9BRA0 125 aaKnown RBP13.03□□□□□ -0.32
BRAT1-206ENST00000493232 KAAG1Q9UBP8 84 aa13.03□□□□□ -0.32
BRAT1-206ENST00000493232 KLK9Q9UKQ9 250 aa13.03□□□□□ -0.32
BRAT1-206ENST00000493232 RLFQ13129 1914 aa13.03□□□□□ -0.32
BRAT1-206ENST00000493232 H3BUA1 57 aa13.03□□□□□ -0.32
BRAT1-206ENST00000493232 RIF1Q5UIP0 2472 aaKnown RBP13.03□□□□□ -0.32
BRAT1-206ENST00000493232 FAM231DQ6ZW35 169 aa13.03□□□□□ -0.32
BRAT1-206ENST00000493232 TRAV8-3A0A0A6YYJ7 113 aa13.02□□□□□ -0.32
BRAT1-206ENST00000493232 C15orf65H3BRN8 121 aa13.02□□□□□ -0.32
BRAT1-206ENST00000493232 PMVKQ15126 192 aa13.02□□□□□ -0.32
BRAT1-206ENST00000493232 PAX9P55771 341 aa13.02□□□□□ -0.33
BRAT1-206ENST00000493232 PRR25Q96S07 402 aa13.02□□□□□ -0.33
BRAT1-206ENST00000493232 MPDZO75970 2070 aa13.02□□□□□ -0.33
BRAT1-206ENST00000493232 VWA8A3KMH1 1905 aa13.02□□□□□ -0.33
BRAT1-206ENST00000493232 TMEM243Q9BU79 118 aa13.02□□□□□ -0.33
BRAT1-206ENST00000493232 FAM215AQ9Y5M1 114 aa13.02□□□□□ -0.33
BRAT1-206ENST00000493232 CD5LO43866 347 aa13.02□□□□□ -0.33
BRAT1-206ENST00000493232 NBL1P41271 181 aa13.01□□□□□ -0.33
BRAT1-206ENST00000493232 RMI2Q96E14 147 aa13.01□□□□□ -0.33
BRAT1-206ENST00000493232 HEATR1Q9H583 2144 aaKnown RBP13.01□□□□□ -0.33
BRAT1-206ENST00000493232 SRSF2Q01130 221 aaKnown RBP13.01□□□□□ -0.33
BRAT1-206ENST00000493232 FNDC1Q4ZHG4 1894 aaPredicted RBP13.01□□□□□ -0.33
BRAT1-206ENST00000493232 DUX4L9Q6RFH8 374 aaPredicted RBP13.01□□□□□ -0.33
BRAT1-206ENST00000493232 COL6A6A6NMZ7 2263 aa13.01□□□□□ -0.33
BRAT1-206ENST00000493232 C18orf32Q8TCD1 76 aa13□□□□□ -0.33
BRAT1-206ENST00000493232 PYY3Q5JQD4 70 aa13□□□□□ -0.33
BRAT1-206ENST00000493232 SDHAF1A6NFY7 115 aa13□□□□□ -0.33
BRAT1-206ENST00000493232 WT1-ASQ06250 92 aa13□□□□□ -0.33
BRAT1-206ENST00000493232 C1orf122Q6ZSJ8 110 aa13□□□□□ -0.33
BRAT1-206ENST00000493232 ADCYAP1P18509 176 aa13□□□□□ -0.33
BRAT1-206ENST00000493232 CFHR3Q02985 330 aa13□□□□□ -0.33
BRAT1-206ENST00000493232 ANXA2RQ3ZCQ2 193 aa12.99□□□□□ -0.33
BRAT1-206ENST00000493232 PIP4P1Q86T03 277 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms