RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 CRYBB3P26998 211 aa10.78□□□□□ -0.68
PDZRN3-210ENST00000492909 JOSD1Q15040 202 aaPredicted RBP10.78□□□□□ -0.68
PDZRN3-210ENST00000492909 C18orf65Q6ZTR6 163 aa10.78□□□□□ -0.68
PDZRN3-210ENST00000492909 FXYD5Q96DB9 178 aa10.78□□□□□ -0.68
PDZRN3-210ENST00000492909 ZNF207O43670 478 aaKnown RBP10.77□□□□□ -0.68
PDZRN3-210ENST00000492909 BUB3O43684 328 aa10.77□□□□□ -0.68
PDZRN3-210ENST00000492909 TSSC4Q9Y5U2 329 aaPredicted RBP10.77□□□□□ -0.68
PDZRN3-210ENST00000492909 TRAV9-1A0A075B6T8 112 aa10.77□□□□□ -0.69
PDZRN3-210ENST00000492909 GATCO43716 136 aaKnown RBP10.77□□□□□ -0.69
PDZRN3-210ENST00000492909 RPL7P18124 248 aaKnown RBP10.77□□□□□ -0.69
PDZRN3-210ENST00000492909 HOXD3P31249 432 aaPredicted RBP10.77□□□□□ -0.69
PDZRN3-210ENST00000492909 CNN1P51911 297 aaKnown RBP10.77□□□□□ -0.69
PDZRN3-210ENST00000492909 DEFB136Q30KP8 78 aa10.77□□□□□ -0.69
PDZRN3-210ENST00000492909 OR8I2Q8N0Y5 310 aa10.77□□□□□ -0.69
PDZRN3-210ENST00000492909 OR4F17Q8NGA8 305 aa10.77□□□□□ -0.69
PDZRN3-210ENST00000492909 CITED2Q99967 270 aaPredicted RBP10.77□□□□□ -0.69
PDZRN3-210ENST00000492909 DAZ1Q9NQZ3 744 aaKnown RBP10.77□□□□□ -0.69
PDZRN3-210ENST00000492909 TRAPPC1Q9Y5R8 145 aa10.77□□□□□ -0.69
PDZRN3-210ENST00000492909 U3KQE9 123 aa10.77□□□□□ -0.69
PDZRN3-210ENST00000492909 LINC01619G3V211 115 aa10.76□□□□□ -0.69
PDZRN3-210ENST00000492909 NBEAP1P0C6P0 100 aa10.76□□□□□ -0.69
PDZRN3-210ENST00000492909 PKIAP61925 76 aa10.76□□□□□ -0.69
PDZRN3-210ENST00000492909 C1orf194Q5T5A4 169 aa10.76□□□□□ -0.69
PDZRN3-210ENST00000492909 OR11H1Q8NG94 326 aa10.76□□□□□ -0.69
PDZRN3-210ENST00000492909 DPF1Q92782 380 aa10.76□□□□□ -0.69
PDZRN3-210ENST00000492909 IL36BQ9NZH7 164 aa10.76□□□□□ -0.69
PDZRN3-210ENST00000492909 UFC1Q9Y3C8 167 aa10.76□□□□□ -0.69
PDZRN3-210ENST00000492909 K7EMT4 169 aa10.75□□□□□ -0.69
PDZRN3-210ENST00000492909 K7EN84 100 aa10.75□□□□□ -0.69
PDZRN3-210ENST00000492909 APOHP02749 345 aaPredicted RBP10.75□□□□□ -0.69
PDZRN3-210ENST00000492909 SNRPCP09234 159 aaKnown RBP10.75□□□□□ -0.69
PDZRN3-210ENST00000492909 HIST1H1EP10412 219 aaKnown RBP10.75□□□□□ -0.69
PDZRN3-210ENST00000492909 HIST2H2BDQ6DRA6 164 aa10.75□□□□□ -0.69
PDZRN3-210ENST00000492909 C8orf86Q6ZUL3 223 aa10.75□□□□□ -0.69
PDZRN3-210ENST00000492909 OR1N2Q8NGR9 330 aa10.75□□□□□ -0.69
PDZRN3-210ENST00000492909 BLNKQ8WV28 456 aa10.75□□□□□ -0.69
PDZRN3-210ENST00000492909 TMEM158Q8WZ71 300 aa10.75□□□□□ -0.69
PDZRN3-210ENST00000492909 GPR82Q96P67 336 aa10.75□□□□□ -0.69
PDZRN3-210ENST00000492909 IGHV3OR16-13A0A075B7E8 117 aa10.75□□□□□ -0.69
PDZRN3-210ENST00000492909 IGHV3-49A0A0A0MS15 119 aa10.75□□□□□ -0.69
PDZRN3-210ENST00000492909 IGHV3-74A0A0B4J1X5 117 aa10.75□□□□□ -0.69
PDZRN3-210ENST00000492909 IGHV3-66A0A0C4DH42 116 aa10.75□□□□□ -0.69
PDZRN3-210ENST00000492909 A0A1W2PRE2 83 aa10.75□□□□□ -0.69
PDZRN3-210ENST00000492909 A0A1W2PRX2 142 aa10.75□□□□□ -0.69
PDZRN3-210ENST00000492909 A0A1W2PS18 150 aa10.75□□□□□ -0.69
PDZRN3-210ENST00000492909 LGALS9O00182 355 aa10.75□□□□□ -0.69
PDZRN3-210ENST00000492909 MRPS12O15235 138 aaKnown RBP10.75□□□□□ -0.69
PDZRN3-210ENST00000492909 GCGP01275 180 aa10.75□□□□□ -0.69
PDZRN3-210ENST00000492909 IGLC2P0DOY2 106 aa10.75□□□□□ -0.69
PDZRN3-210ENST00000492909 GZMBP10144 247 aa10.75□□□□□ -0.69
PDZRN3-210ENST00000492909 SYNJ2BPP57105 145 aa10.75□□□□□ -0.69
PDZRN3-210ENST00000492909 TM4SF20Q53R12 229 aa10.75□□□□□ -0.69
PDZRN3-210ENST00000492909 REC114Q7Z4M0 266 aa10.75□□□□□ -0.69
PDZRN3-210ENST00000492909 TMEM18Q96B42 140 aa10.75□□□□□ -0.69
PDZRN3-210ENST00000492909 GRAMD2BQ96HH9 432 aa10.74□□□□□ -0.69
PDZRN3-210ENST00000492909 ZNF586Q9NXT0 402 aa10.74□□□□□ -0.69
PDZRN3-210ENST00000492909 IGHV7-4-1A0A0J9YVY3 117 aa10.73□□□□□ -0.69
PDZRN3-210ENST00000492909 A8MWP6 167 aa10.73□□□□□ -0.69
PDZRN3-210ENST00000492909 SLURP1P55000 103 aa10.73□□□□□ -0.69
PDZRN3-210ENST00000492909 DEFA6Q01524 100 aa10.73□□□□□ -0.69
PDZRN3-210ENST00000492909 KLF5Q13887 457 aaPredicted RBP10.73□□□□□ -0.69
PDZRN3-210ENST00000492909 GBGT1Q8N5D6 347 aa10.73□□□□□ -0.69
PDZRN3-210ENST00000492909 DUX3Q96PT4 197 aa10.73□□□□□ -0.69
PDZRN3-210ENST00000492909 TRBV19A0A075B6N1 114 aa10.72□□□□□ -0.69
PDZRN3-210ENST00000492909 TSTD3H0UI37 97 aa10.72□□□□□ -0.69
PDZRN3-210ENST00000492909 H3BTX0 84 aa10.72□□□□□ -0.69
PDZRN3-210ENST00000492909 RANP62826 216 aaKnown RBP10.72□□□□□ -0.69
PDZRN3-210ENST00000492909 C16orf54Q6UWD8 224 aa10.72□□□□□ -0.69
PDZRN3-210ENST00000492909 RAX2Q96IS3 184 aa10.72□□□□□ -0.69
PDZRN3-210ENST00000492909 COL6A5A8TX70 2615 aa10.72□□□□□ -0.69
PDZRN3-210ENST00000492909 TMEM213A2RRL7 107 aa10.72□□□□□ -0.69
PDZRN3-210ENST00000492909 HELTA6NFD8 242 aa10.72□□□□□ -0.69
PDZRN3-210ENST00000492909 GGTLC3B5MD39 225 aa10.72□□□□□ -0.69
PDZRN3-210ENST00000492909 BMI1P35226 326 aa10.72□□□□□ -0.69
PDZRN3-210ENST00000492909 SUMO1P63165 101 aaKnown RBP10.72□□□□□ -0.69
PDZRN3-210ENST00000492909 PDE6HQ13956 83 aa10.72□□□□□ -0.69
PDZRN3-210ENST00000492909 CENPWQ5EE01 88 aa10.72□□□□□ -0.69
PDZRN3-210ENST00000492909 GLMPQ8WWB7 406 aa10.72□□□□□ -0.69
PDZRN3-210ENST00000492909 RHPN1-AS1Q9BWJ2 59 aa10.72□□□□□ -0.69
PDZRN3-210ENST00000492909 SMPXQ9UHP9 88 aa10.72□□□□□ -0.69
PDZRN3-210ENST00000492909 CCL24O00175 119 aa10.71□□□□□ -0.69
PDZRN3-210ENST00000492909 SLC17A3O00476 420 aa10.71□□□□□ -0.69
PDZRN3-210ENST00000492909 GNG4P50150 75 aa10.71□□□□□ -0.69
PDZRN3-210ENST00000492909 KRTAP10-3P60369 221 aa10.71□□□□□ -0.69
PDZRN3-210ENST00000492909 FHL3Q13643 280 aa10.71□□□□□ -0.69
PDZRN3-210ENST00000492909 SIGLEC15Q6ZMC9 328 aa10.71□□□□□ -0.69
PDZRN3-210ENST00000492909 C17orf77Q96MU5 243 aa10.71□□□□□ -0.69
PDZRN3-210ENST00000492909 SMAD5-AS1Q9Y6J3 95 aa10.71□□□□□ -0.69
PDZRN3-210ENST00000492909 V9GYV3 84 aa10.71□□□□□ -0.69
PDZRN3-210ENST00000492909 A0A087X0K7 114 aa10.7□□□□□ -0.7
PDZRN3-210ENST00000492909 ZNF785A8K8V0 405 aa10.7□□□□□ -0.7
PDZRN3-210ENST00000492909 CHEK1O14757 476 aa10.7□□□□□ -0.7
PDZRN3-210ENST00000492909 DDTP30046 118 aa10.7□□□□□ -0.7
PDZRN3-210ENST00000492909 KRTAP21-3Q3LHN1 58 aa10.7□□□□□ -0.7
PDZRN3-210ENST00000492909 NDUFA11Q86Y39 141 aa10.7□□□□□ -0.7
PDZRN3-210ENST00000492909 LYPD1Q8N2G4 141 aa10.7□□□□□ -0.7
PDZRN3-210ENST00000492909 PRO1933Q9H354 126 aa10.7□□□□□ -0.7
PDZRN3-210ENST00000492909 Q9H3A6 140 aa10.7□□□□□ -0.7
PDZRN3-210ENST00000492909 ADARB2-AS1A8MUL3 147 aa10.7□□□□□ -0.7
PDZRN3-210ENST00000492909 MYCNOSP40205 109 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms