RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 ZNF503Q96F45 646 aa10.19□□□□□ -0.78
CCM2-217ENST00000492883 ACTR3CQ9C0K3 210 aaPredicted RBP10.19□□□□□ -0.78
CCM2-217ENST00000492883 EDA2RQ9HAV5 297 aa10.19□□□□□ -0.78
CCM2-217ENST00000492883 PRELID1Q9Y255 219 aa10.19□□□□□ -0.78
CCM2-217ENST00000492883 PRAC2D3DTV9 90 aa10.18□□□□□ -0.78
CCM2-217ENST00000492883 RANP62826 216 aaKnown RBP10.18□□□□□ -0.78
CCM2-217ENST00000492883 ICAM4Q14773 271 aa10.18□□□□□ -0.78
CCM2-217ENST00000492883 AKR1C8PQ5T2L2 129 aa10.18□□□□□ -0.78
CCM2-217ENST00000492883 PQLC2Q6ZP29 291 aa10.18□□□□□ -0.78
CCM2-217ENST00000492883 TMUB2Q71RG4 321 aa10.18□□□□□ -0.78
CCM2-217ENST00000492883 CSNK1G2-AS1Q8NCQ2 148 aa10.18□□□□□ -0.78
CCM2-217ENST00000492883 RAB24Q969Q5 203 aa10.18□□□□□ -0.78
CCM2-217ENST00000492883 MRPL53Q96EL3 112 aaKnown RBP10.18□□□□□ -0.78
CCM2-217ENST00000492883 ZNF471Q9BX82 626 aaPredicted RBP10.18□□□□□ -0.78
CCM2-217ENST00000492883 DNAH9Q9NYC9 4486 aa10.17□□□□□ -0.78
CCM2-217ENST00000492883 M0R3E3 92 aa10.17□□□□□ -0.78
CCM2-217ENST00000492883 BCL2L11O43521 198 aa10.17□□□□□ -0.78
CCM2-217ENST00000492883 AMTNQ6UX39 209 aa10.17□□□□□ -0.78
CCM2-217ENST00000492883 PHYHIPLQ96FC7 376 aa10.17□□□□□ -0.78
CCM2-217ENST00000492883 IGHV3OR16-12A0A075B7B8 117 aa10.16□□□□□ -0.78
CCM2-217ENST00000492883 A0A0J9YWU9 116 aa10.16□□□□□ -0.78
CCM2-217ENST00000492883 A0A1B0GVG6 124 aa10.16□□□□□ -0.78
CCM2-217ENST00000492883 A8MTW9 85 aa10.16□□□□□ -0.78
CCM2-217ENST00000492883 C1QBP02746 253 aa10.16□□□□□ -0.78
CCM2-217ENST00000492883 AMBPP02760 352 aa10.16□□□□□ -0.78
CCM2-217ENST00000492883 STAG3L2P0CL84 134 aa10.16□□□□□ -0.78
CCM2-217ENST00000492883 STAG3L3P0CL85 134 aa10.16□□□□□ -0.78
CCM2-217ENST00000492883 CSN1S1P47710 185 aa10.16□□□□□ -0.78
CCM2-217ENST00000492883 EIF5AP63241 154 aaKnown RBP10.16□□□□□ -0.78
CCM2-217ENST00000492883 SPINK13Q1W4C9 94 aa10.16□□□□□ -0.78
CCM2-217ENST00000492883 LYPD1Q8N2G4 141 aa10.16□□□□□ -0.78
CCM2-217ENST00000492883 HYLS1Q96M11 299 aa10.16□□□□□ -0.78
CCM2-217ENST00000492883 Q9H3A6 140 aa10.16□□□□□ -0.78
CCM2-217ENST00000492883 ZNF705EA8MWA4 302 aaPredicted RBP10.15□□□□□ -0.78
CCM2-217ENST00000492883 BOLA2-SMG1P6H3BVE0 249 aa10.15□□□□□ -0.78
CCM2-217ENST00000492883 M0R2Z0 102 aa10.15□□□□□ -0.78
CCM2-217ENST00000492883 ARL14EPLP0DKL9 152 aa10.15□□□□□ -0.78
CCM2-217ENST00000492883 LGALSLQ3ZCW2 172 aaPredicted RBP10.15□□□□□ -0.78
CCM2-217ENST00000492883 MUC7Q8TAX7 377 aa10.15□□□□□ -0.78
CCM2-217ENST00000492883 GOLT1BQ9Y3E0 138 aa10.15□□□□□ -0.78
CCM2-217ENST00000492883 PGPA6NDG6 321 aa10.14□□□□□ -0.79
CCM2-217ENST00000492883 DEFB4AO15263 64 aa10.14□□□□□ -0.79
CCM2-217ENST00000492883 CXorf1O96002 111 aa10.14□□□□□ -0.79
CCM2-217ENST00000492883 GCHFRP30047 84 aa10.14□□□□□ -0.79
CCM2-217ENST00000492883 FAM74A1Q5RGS3 127 aa10.14□□□□□ -0.79
CCM2-217ENST00000492883 IQCF2Q8IXL9 164 aa10.14□□□□□ -0.79
CCM2-217ENST00000492883 IGF2BP2-AS1Q96M15 143 aa10.14□□□□□ -0.79
CCM2-217ENST00000492883 TMEM208Q9BTX3 173 aa10.14□□□□□ -0.79
CCM2-217ENST00000492883 X6R8D5 127 aa10.14□□□□□ -0.79
CCM2-217ENST00000492883 TRAV12-2A0A075B6T6 113 aa10.13□□□□□ -0.79
CCM2-217ENST00000492883 CTXND1A0A1B0GTU2 59 aa10.13□□□□□ -0.79
CCM2-217ENST00000492883 NPIPB6E9PJ23 425 aa10.13□□□□□ -0.79
CCM2-217ENST00000492883 SEC11BP0C7V7 166 aa10.13□□□□□ -0.79
CCM2-217ENST00000492883 TPT1P13693 172 aaKnown RBP10.13□□□□□ -0.79
CCM2-217ENST00000492883 MIFP14174 115 aa10.13□□□□□ -0.79
CCM2-217ENST00000492883 TSPOP30536 169 aa10.13□□□□□ -0.79
CCM2-217ENST00000492883 CDKN1BP46527 198 aa10.13□□□□□ -0.79
CCM2-217ENST00000492883 ERCC8Q13216 396 aa10.13□□□□□ -0.79
CCM2-217ENST00000492883 BAP18Q8IXM2 172 aa10.13□□□□□ -0.79
CCM2-217ENST00000492883 IL17DQ8TAD2 202 aa10.13□□□□□ -0.79
CCM2-217ENST00000492883 CMTM2Q8TAZ6 248 aa10.13□□□□□ -0.79
CCM2-217ENST00000492883 RXFP4Q8TDU9 374 aa10.13□□□□□ -0.79
CCM2-217ENST00000492883 LINC00477Q96M19 166 aa10.13□□□□□ -0.79
CCM2-217ENST00000492883 OTORQ9NRC9 128 aa10.13□□□□□ -0.79
CCM2-217ENST00000492883 TMEM167BQ9NRX6 74 aa10.13□□□□□ -0.79
CCM2-217ENST00000492883 IGKV2-40A0A087WW87 121 aaPredicted RBP10.12□□□□□ -0.79
CCM2-217ENST00000492883 IGHV4-28A0A0C4DH34 117 aa10.12□□□□□ -0.79
CCM2-217ENST00000492883 C3orf84H3BNL1 204 aa10.12□□□□□ -0.79
CCM2-217ENST00000492883 CRXO43186 299 aaPredicted RBP10.12□□□□□ -0.79
CCM2-217ENST00000492883 INSP01308 110 aa10.12□□□□□ -0.79
CCM2-217ENST00000492883 IGKV2D-40P01614 121 aaPredicted RBP10.12□□□□□ -0.79
CCM2-217ENST00000492883 CT45A10P0DMU9 189 aa10.12□□□□□ -0.79
CCM2-217ENST00000492883 CD300CQ08708 224 aa10.12□□□□□ -0.79
CCM2-217ENST00000492883 ZNF726P1Q15940 193 aa10.12□□□□□ -0.79
CCM2-217ENST00000492883 ZNF705AQ6ZN79 300 aaPredicted RBP10.12□□□□□ -0.79
CCM2-217ENST00000492883 SSX7Q7RTT5 188 aa10.12□□□□□ -0.79
CCM2-217ENST00000492883 C1orf158Q8N1D5 194 aa10.12□□□□□ -0.79
CCM2-217ENST00000492883 AGPAT4-IT1Q9H0P7 198 aa10.12□□□□□ -0.79
CCM2-217ENST00000492883 SMIM9A6NGZ8 99 aa10.11□□□□□ -0.79
CCM2-217ENST00000492883 UMAD1C9J7I0 102 aa10.11□□□□□ -0.79
CCM2-217ENST00000492883 J3KRW8 73 aa10.11□□□□□ -0.79
CCM2-217ENST00000492883 LEPP41159 167 aa10.11□□□□□ -0.79
CCM2-217ENST00000492883 ZFP69Q49AA0 526 aa10.11□□□□□ -0.79
CCM2-217ENST00000492883 TMEM78Q5T7P6 136 aa10.11□□□□□ -0.79
CCM2-217ENST00000492883 C9orf47Q6ZRZ4 202 aa10.11□□□□□ -0.79
CCM2-217ENST00000492883 Q8NAQ8 132 aa10.11□□□□□ -0.79
CCM2-217ENST00000492883 LINC01587Q99440 93 aa10.11□□□□□ -0.79
CCM2-217ENST00000492883 NEU1Q99519 415 aa10.11□□□□□ -0.79
CCM2-217ENST00000492883 C11orf68Q9H3H3 251 aaKnown RBP10.11□□□□□ -0.79
CCM2-217ENST00000492883 HUWE1Q7Z6Z7 4374 aaKnown RBP10.11□□□□□ -0.79
CCM2-217ENST00000492883 MAP1LC3B2A6NCE7 125 aa10.1□□□□□ -0.79
CCM2-217ENST00000492883 DIRC3C9JPN6 131 aa10.1□□□□□ -0.79
CCM2-217ENST00000492883 HBE1P02100 147 aa10.1□□□□□ -0.79
CCM2-217ENST00000492883 RBMY1A1P0DJD3 496 aaKnown RBP10.1□□□□□ -0.79
CCM2-217ENST00000492883 RBMY1CP0DJD4 496 aa10.1□□□□□ -0.79
CCM2-217ENST00000492883 FGF8P55075 233 aaPredicted RBP10.1□□□□□ -0.79
CCM2-217ENST00000492883 RBMY1FQ15415 496 aaKnown RBP10.1□□□□□ -0.79
CCM2-217ENST00000492883 ZFAND6Q6FIF0 208 aa10.1□□□□□ -0.79
CCM2-217ENST00000492883 EIF5AL1Q6IS14 154 aaKnown RBP10.1□□□□□ -0.79
CCM2-217ENST00000492883 STOML3Q8TAV4 291 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms