RNA–Protein interactions for RNA: ENST00000492672.5

COPS3-210, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 4

Gene COPS3, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-210ENST00000492672 GCHFRP30047 84 aa11.64□□□□□ -0.55
COPS3-210ENST00000492672 FAM74A1Q5RGS3 127 aa11.64□□□□□ -0.55
COPS3-210ENST00000492672 FOXI2Q6ZQN5 318 aa11.64□□□□□ -0.55
COPS3-210ENST00000492672 OR4B1Q8NGF8 309 aa11.64□□□□□ -0.55
COPS3-210ENST00000492672 FAM213BQ8TBF2 198 aa11.64□□□□□ -0.55
COPS3-210ENST00000492672 HLA-DRB4X5D2U9 266 aa11.64□□□□□ -0.55
COPS3-210ENST00000492672 A0A1B0GV50 99 aa11.63□□□□□ -0.55
COPS3-210ENST00000492672 EIF5AP63241 154 aaKnown RBP11.63□□□□□ -0.55
COPS3-210ENST00000492672 PQLC2Q6ZP29 291 aa11.63□□□□□ -0.55
COPS3-210ENST00000492672 SLC35B3Q9H1N7 401 aa11.63□□□□□ -0.55
COPS3-210ENST00000492672 Q9H3A6 140 aa11.63□□□□□ -0.55
COPS3-210ENST00000492672 MAP1LC3B2A6NCE7 125 aa11.62□□□□□ -0.55
COPS3-210ENST00000492672 ZNF253O75346 499 aa11.62□□□□□ -0.55
COPS3-210ENST00000492672 CNN1P51911 297 aaKnown RBP11.62□□□□□ -0.55
COPS3-210ENST00000492672 HIST1H1AQ02539 215 aaPredicted RBP11.62□□□□□ -0.55
COPS3-210ENST00000492672 ERCC8Q13216 396 aa11.62□□□□□ -0.55
COPS3-210ENST00000492672 PDE6HQ13956 83 aa11.62□□□□□ -0.55
COPS3-210ENST00000492672 SAMD13Q5VXD3 122 aa11.62□□□□□ -0.55
COPS3-210ENST00000492672 OR8A1Q8NGG7 326 aa11.62□□□□□ -0.55
COPS3-210ENST00000492672 SUN5Q8TC36 379 aa11.62□□□□□ -0.55
COPS3-210ENST00000492672 TM2D3Q9BRN9 247 aa11.62□□□□□ -0.55
COPS3-210ENST00000492672 MAP1LC3BQ9GZQ8 125 aa11.62□□□□□ -0.55
COPS3-210ENST00000492672 CSTL1Q9H114 145 aa11.62□□□□□ -0.55
COPS3-210ENST00000492672 CLEC5AQ9NY25 188 aa11.62□□□□□ -0.55
COPS3-210ENST00000492672 CXorf1O96002 111 aa11.61□□□□□ -0.55
COPS3-210ENST00000492672 PSG9Q00887 426 aa11.61□□□□□ -0.55
COPS3-210ENST00000492672 DEFB135Q30KP9 77 aa11.61□□□□□ -0.55
COPS3-210ENST00000492672 EBLN2Q6P2I7 272 aa11.61□□□□□ -0.55
COPS3-210ENST00000492672 AMTNQ6UX39 209 aa11.61□□□□□ -0.55
COPS3-210ENST00000492672 ALKAL2Q6UX46 152 aa11.61□□□□□ -0.55
COPS3-210ENST00000492672 IQCF2Q8IXL9 164 aa11.61□□□□□ -0.55
COPS3-210ENST00000492672 PGPA6NDG6 321 aa11.6□□□□□ -0.55
COPS3-210ENST00000492672 CCL20P78556 96 aa11.6□□□□□ -0.55
COPS3-210ENST00000492672 KIR3DS1Q14943 382 aa11.6□□□□□ -0.55
COPS3-210ENST00000492672 SFT2D1Q8WV19 159 aa11.6□□□□□ -0.55
COPS3-210ENST00000492672 MBD3L1Q8WWY6 194 aa11.6□□□□□ -0.55
COPS3-210ENST00000492672 IGKV2-40A0A087WW87 121 aaPredicted RBP11.59□□□□□ -0.55
COPS3-210ENST00000492672 A8MTW9 85 aa11.59□□□□□ -0.55
COPS3-210ENST00000492672 UMAD1C9J7I0 102 aa11.59□□□□□ -0.55
COPS3-210ENST00000492672 CA1P00915 261 aaPredicted RBP11.59□□□□□ -0.55
COPS3-210ENST00000492672 IGKV2D-40P01614 121 aaPredicted RBP11.59□□□□□ -0.55
COPS3-210ENST00000492672 SULT1A2P50226 295 aa11.59□□□□□ -0.55
COPS3-210ENST00000492672 APOC4P55056 127 aa11.59□□□□□ -0.55
COPS3-210ENST00000492672 UBE2G2P60604 165 aa11.59□□□□□ -0.55
COPS3-210ENST00000492672 GNG5P63218 68 aa11.59□□□□□ -0.55
COPS3-210ENST00000492672 VGLL1Q99990 258 aa11.59□□□□□ -0.55
COPS3-210ENST00000492672 OVOL2Q9BRP0 275 aa11.59□□□□□ -0.55
COPS3-210ENST00000492672 XCL2Q9UBD3 114 aa11.59□□□□□ -0.55
COPS3-210ENST00000492672 YTHDF2Q9Y5A9 579 aaKnown RBP11.59□□□□□ -0.55
COPS3-210ENST00000492672 KIR2DL5BA0A0G2JN68 375 aa11.58□□□□□ -0.56
COPS3-210ENST00000492672 KIR2DL5BA0A0G2JPC4 375 aa11.58□□□□□ -0.56
COPS3-210ENST00000492672 CT45A10P0DMU9 189 aa11.58□□□□□ -0.56
COPS3-210ENST00000492672 KIR2DL5AQ8N109 375 aa11.58□□□□□ -0.56
COPS3-210ENST00000492672 KIR2DL5BQ8NHK3 375 aa11.58□□□□□ -0.56
COPS3-210ENST00000492672 AGPAT4-IT1Q9H0P7 198 aa11.58□□□□□ -0.56
COPS3-210ENST00000492672 AAMDCQ9H7C9 122 aa11.58□□□□□ -0.56
COPS3-210ENST00000492672 OTORQ9NRC9 128 aa11.58□□□□□ -0.56
COPS3-210ENST00000492672 RPH3ALQ9UNE2 315 aa11.58□□□□□ -0.56
COPS3-210ENST00000492672 GGTLC3B5MD39 225 aa11.57□□□□□ -0.56
COPS3-210ENST00000492672 M0R2Z0 102 aa11.57□□□□□ -0.56
COPS3-210ENST00000492672 H2AFB1P0C5Y9 115 aa11.57□□□□□ -0.56
COPS3-210ENST00000492672 SPINK13Q1W4C9 94 aa11.57□□□□□ -0.56
COPS3-210ENST00000492672 LYPD1Q8N2G4 141 aa11.57□□□□□ -0.56
COPS3-210ENST00000492672 CSNK1G2-AS1Q8NCQ2 148 aa11.57□□□□□ -0.56
COPS3-210ENST00000492672 TMEM167BQ9NRX6 74 aa11.57□□□□□ -0.56
COPS3-210ENST00000492672 PRELID1Q9Y255 219 aa11.57□□□□□ -0.56
COPS3-210ENST00000492672 NPIPB6E9PJ23 425 aa11.56□□□□□ -0.56
COPS3-210ENST00000492672 DUSP14O95147 198 aaKnown RBP11.56□□□□□ -0.56
COPS3-210ENST00000492672 SUMO1P63165 101 aaKnown RBP11.56□□□□□ -0.56
COPS3-210ENST00000492672 EIF5AL1Q6IS14 154 aaKnown RBP11.56□□□□□ -0.56
COPS3-210ENST00000492672 DPPA3Q6W0C5 159 aa11.56□□□□□ -0.56
COPS3-210ENST00000492672 RNF183Q96D59 192 aa11.56□□□□□ -0.56
COPS3-210ENST00000492672 MRPL53Q96EL3 112 aaKnown RBP11.56□□□□□ -0.56
COPS3-210ENST00000492672 SGK494Q96LW2 274 aa11.56□□□□□ -0.56
COPS3-210ENST00000492672 CLUHP3Q96NS8 147 aa11.56□□□□□ -0.56
COPS3-210ENST00000492672 TRAV12-2A0A075B6T6 113 aa11.55□□□□□ -0.56
COPS3-210ENST00000492672 FAM74A7A6NL05 159 aa11.55□□□□□ -0.56
COPS3-210ENST00000492672 DIRC3C9JPN6 131 aa11.55□□□□□ -0.56
COPS3-210ENST00000492672 UBE2CO00762 179 aa11.55□□□□□ -0.56
COPS3-210ENST00000492672 CRXO43186 299 aaPredicted RBP11.55□□□□□ -0.56
COPS3-210ENST00000492672 SLC25A5P05141 298 aaKnown RBP11.55□□□□□ -0.56
COPS3-210ENST00000492672 MORN3Q6PF18 240 aaPredicted RBP11.55□□□□□ -0.56
COPS3-210ENST00000492672 Q6ZWC4 215 aa11.55□□□□□ -0.56
COPS3-210ENST00000492672 OR10J6PQ8NGY7 276 aa11.55□□□□□ -0.56
COPS3-210ENST00000492672 RCHY1Q96PM5 261 aa11.55□□□□□ -0.56
COPS3-210ENST00000492672 SPATA25Q9BR10 227 aa11.55□□□□□ -0.56
COPS3-210ENST00000492672 J3KRW8 73 aa11.54□□□□□ -0.56
COPS3-210ENST00000492672 SPRY2O43597 315 aa11.54□□□□□ -0.56
COPS3-210ENST00000492672 PRM2P04554 102 aa11.54□□□□□ -0.56
COPS3-210ENST00000492672 NHLRC4P0CG21 123 aaPredicted RBP11.54□□□□□ -0.56
COPS3-210ENST00000492672 RBMY1A1P0DJD3 496 aaKnown RBP11.54□□□□□ -0.56
COPS3-210ENST00000492672 RBMY1CP0DJD4 496 aa11.54□□□□□ -0.56
COPS3-210ENST00000492672 RBMY1FQ15415 496 aaKnown RBP11.54□□□□□ -0.56
COPS3-210ENST00000492672 PCNPQ8WW12 178 aaKnown RBP11.54□□□□□ -0.56
COPS3-210ENST00000492672 TRAV8-1A0A0A6YYK1 113 aa11.53□□□□□ -0.56
COPS3-210ENST00000492672 A0A1W2PRE2 83 aa11.53□□□□□ -0.56
COPS3-210ENST00000492672 ZNF705EA8MWA4 302 aaPredicted RBP11.53□□□□□ -0.56
COPS3-210ENST00000492672 PAGE4O60829 102 aa11.53□□□□□ -0.56
COPS3-210ENST00000492672 ATP5G3P48201 142 aa11.53□□□□□ -0.56
COPS3-210ENST00000492672 RAB5CP51148 216 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms