RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 UFSP1Q6NVU6 142 aa10.06□□□□□ -0.8
HDAC3-213ENST00000492506 FA2HQ7L5A8 372 aa10.06□□□□□ -0.8
HDAC3-213ENST00000492506 NEGR1Q7Z3B1 354 aa10.06□□□□□ -0.8
HDAC3-213ENST00000492506 ARPC1AQ92747 370 aa10.06□□□□□ -0.8
HDAC3-213ENST00000492506 SIGMAR1Q99720 223 aa10.06□□□□□ -0.8
HDAC3-213ENST00000492506 FAM103A1Q9BTL3 118 aaKnown RBP10.06□□□□□ -0.8
HDAC3-213ENST00000492506 TMEM191AQ9H0A3 160 aa10.06□□□□□ -0.8
HDAC3-213ENST00000492506 SLC25A22Q9H936 323 aa10.06□□□□□ -0.8
HDAC3-213ENST00000492506 OSTCQ9NRP0 149 aa10.06□□□□□ -0.8
HDAC3-213ENST00000492506 KMT2AQ03164 3969 aa10.06□□□□□ -0.8
HDAC3-213ENST00000492506 TRBV6-6A0A0A6YYG2 114 aa10.05□□□□□ -0.8
HDAC3-213ENST00000492506 H3BRM9 83 aa10.05□□□□□ -0.8
HDAC3-213ENST00000492506 ATP6V0E1O15342 81 aa10.05□□□□□ -0.8
HDAC3-213ENST00000492506 PIGYQ3MUY2 71 aa10.05□□□□□ -0.8
HDAC3-213ENST00000492506 C19orf54Q5BKX5 351 aa10.05□□□□□ -0.8
HDAC3-213ENST00000492506 LINC00596Q86U02 117 aa10.05□□□□□ -0.8
HDAC3-213ENST00000492506 GAPTQ8N292 157 aa10.05□□□□□ -0.8
HDAC3-213ENST00000492506 ZNF439Q8NDP4 499 aa10.05□□□□□ -0.8
HDAC3-213ENST00000492506 UBALD1Q8TB05 177 aa10.05□□□□□ -0.8
HDAC3-213ENST00000492506 CHRDL1Q9BU40 450 aa10.05□□□□□ -0.8
HDAC3-213ENST00000492506 COMMD5Q9GZQ3 224 aa10.05□□□□□ -0.8
HDAC3-213ENST00000492506 NAT8BQ9UHF3 227 aa10.05□□□□□ -0.8
HDAC3-213ENST00000492506 WASHC3Q9Y3C0 194 aa10.05□□□□□ -0.8
HDAC3-213ENST00000492506 IGHV3-43A0A0B4J1X8 118 aa10.04□□□□□ -0.8
HDAC3-213ENST00000492506 LINC01619G3V211 115 aa10.04□□□□□ -0.8
HDAC3-213ENST00000492506 K7EP34 96 aa10.04□□□□□ -0.8
HDAC3-213ENST00000492506 CRXO43186 299 aaPredicted RBP10.04□□□□□ -0.8
HDAC3-213ENST00000492506 HSBP1O75506 76 aa10.04□□□□□ -0.8
HDAC3-213ENST00000492506 CXorf1O96002 111 aa10.04□□□□□ -0.8
HDAC3-213ENST00000492506 OR5AL1P0C617 328 aa10.04□□□□□ -0.8
HDAC3-213ENST00000492506 STAG3L3P0CL85 134 aa10.04□□□□□ -0.8
HDAC3-213ENST00000492506 IGHV3-43DP0DP04 118 aa10.04□□□□□ -0.8
HDAC3-213ENST00000492506 AREGP15514 252 aa10.04□□□□□ -0.8
HDAC3-213ENST00000492506 ZNF134P52741 427 aa10.04□□□□□ -0.8
HDAC3-213ENST00000492506 TMEM136Q6ZRR5 245 aa10.04□□□□□ -0.8
HDAC3-213ENST00000492506 SLC25A48Q6ZT89 311 aaKnown RBP10.04□□□□□ -0.8
HDAC3-213ENST00000492506 HAPLN4Q86UW8 402 aa10.04□□□□□ -0.8
HDAC3-213ENST00000492506 MMD2Q8IY49 270 aa10.04□□□□□ -0.8
HDAC3-213ENST00000492506 OR10W1Q8NGF6 305 aa10.04□□□□□ -0.8
HDAC3-213ENST00000492506 OR10V1Q8NGI7 309 aa10.04□□□□□ -0.8
HDAC3-213ENST00000492506 OR1B1Q8NGR6 318 aa10.04□□□□□ -0.8
HDAC3-213ENST00000492506 TSKUQ8WUA8 353 aa10.04□□□□□ -0.8
HDAC3-213ENST00000492506 RITA1Q96K30 269 aa10.04□□□□□ -0.8
HDAC3-213ENST00000492506 SPATA25Q9BR10 227 aa10.04□□□□□ -0.8
HDAC3-213ENST00000492506 IGHV4OR15-8A0A075B7B6 117 aa10.03□□□□□ -0.8
HDAC3-213ENST00000492506 A0A087WW49 117 aa10.03□□□□□ -0.8
HDAC3-213ENST00000492506 IGHV7-81A0A0B4J1V7 117 aa10.03□□□□□ -0.8
HDAC3-213ENST00000492506 TRAV41A0A0B4J266 112 aa10.03□□□□□ -0.8
HDAC3-213ENST00000492506 PGLYRP1O75594 196 aaPredicted RBP10.03□□□□□ -0.8
HDAC3-213ENST00000492506 NDUFB4O95168 129 aa10.03□□□□□ -0.8
HDAC3-213ENST00000492506 RBM11P57052 281 aaKnown RBP10.03□□□□□ -0.8
HDAC3-213ENST00000492506 PSMG4Q5JS54 123 aa10.03□□□□□ -0.8
HDAC3-213ENST00000492506 TMEM70Q9BUB7 260 aa10.03□□□□□ -0.8
HDAC3-213ENST00000492506 KCNIP1Q9NZI2 227 aa10.03□□□□□ -0.8
HDAC3-213ENST00000492506 CACNG5Q9UF02 275 aa10.03□□□□□ -0.8
HDAC3-213ENST00000492506 PCLOQ9Y6V0 5065 aa10.03□□□□□ -0.8
HDAC3-213ENST00000492506 A0A1W2PPV4 95 aa10.02□□□□□ -0.81
HDAC3-213ENST00000492506 TMEM30CPA0ZSE6 113 aa10.02□□□□□ -0.81
HDAC3-213ENST00000492506 C9orf118A6NHY6 69 aa10.02□□□□□ -0.81
HDAC3-213ENST00000492506 NUDT3O95989 172 aa10.02□□□□□ -0.81
HDAC3-213ENST00000492506 IGLV1-51P01701 117 aa10.02□□□□□ -0.81
HDAC3-213ENST00000492506 APCSP02743 223 aa10.02□□□□□ -0.81
HDAC3-213ENST00000492506 LGALS1P09382 135 aaKnown RBP10.02□□□□□ -0.81
HDAC3-213ENST00000492506 NPPCP23582 126 aa10.02□□□□□ -0.81
HDAC3-213ENST00000492506 CNTFRP26992 372 aa10.02□□□□□ -0.81
HDAC3-213ENST00000492506 CT45A1Q5HYN5 189 aa10.02□□□□□ -0.81
HDAC3-213ENST00000492506 ZNF818PQ6ZRF7 136 aa10.02□□□□□ -0.81
HDAC3-213ENST00000492506 MOB1BQ7L9L4 216 aa10.02□□□□□ -0.81
HDAC3-213ENST00000492506 C5orf17Q8NAS9 161 aa10.02□□□□□ -0.81
HDAC3-213ENST00000492506 CT45A3Q8NHU0 189 aa10.02□□□□□ -0.81
HDAC3-213ENST00000492506 HECTD4Q9Y4D8 3996 aa10.02□□□□□ -0.81
HDAC3-213ENST00000492506 TMEM189A5PLL7 270 aa10.01□□□□□ -0.81
HDAC3-213ENST00000492506 OR2T8A6NH00 312 aa10.01□□□□□ -0.81
HDAC3-213ENST00000492506 ZNF207O43670 478 aaKnown RBP10.01□□□□□ -0.81
HDAC3-213ENST00000492506 MC5RP33032 325 aa10.01□□□□□ -0.81
HDAC3-213ENST00000492506 ARL16Q0P5N6 197 aa10.01□□□□□ -0.81
HDAC3-213ENST00000492506 RTL8BQ17RB0 113 aa10.01□□□□□ -0.81
HDAC3-213ENST00000492506 MPV17L2Q567V2 206 aa10.01□□□□□ -0.81
HDAC3-213ENST00000492506 ZBTB34Q8NCN2 500 aa10.01□□□□□ -0.81
HDAC3-213ENST00000492506 CHCHD1Q96BP2 118 aaKnown RBP10.01□□□□□ -0.81
HDAC3-213ENST00000492506 GRAMD2BQ96HH9 432 aa10.01□□□□□ -0.81
HDAC3-213ENST00000492506 CLUHP3Q96NS8 147 aa10.01□□□□□ -0.81
HDAC3-213ENST00000492506 NPCDR1Q9BY65 106 aa10.01□□□□□ -0.81
HDAC3-213ENST00000492506 ZNF331Q9NQX6 463 aaPredicted RBP10.01□□□□□ -0.81
HDAC3-213ENST00000492506 IZUMO1RA6ND01 250 aa10□□□□□ -0.81
HDAC3-213ENST00000492506 H3BP45 60 aa10□□□□□ -0.81
HDAC3-213ENST00000492506 M0R2Z0 102 aa10□□□□□ -0.81
HDAC3-213ENST00000492506 ISLRO14498 428 aa10□□□□□ -0.81
HDAC3-213ENST00000492506 NAPSAO96009 420 aa10□□□□□ -0.81
HDAC3-213ENST00000492506 IAPPP10997 89 aa10□□□□□ -0.81
HDAC3-213ENST00000492506 S100A7P31151 101 aa10□□□□□ -0.81
HDAC3-213ENST00000492506 CRIP2P52943 208 aaPredicted RBP10□□□□□ -0.81
HDAC3-213ENST00000492506 NDPQ00604 133 aa10□□□□□ -0.81
HDAC3-213ENST00000492506 C5orf64Q2M2E5 130 aa10□□□□□ -0.81
HDAC3-213ENST00000492506 SPANXN5Q5MJ07 72 aa10□□□□□ -0.81
HDAC3-213ENST00000492506 ZNF497Q6ZNH5 498 aa10□□□□□ -0.81
HDAC3-213ENST00000492506 OR2W1Q9Y3N9 320 aa10□□□□□ -0.81
HDAC3-213ENST00000492506 DNAH10Q8IVF4 4471 aa9.99□□□□□ -0.81
HDAC3-213ENST00000492506 C7orf71A4D174 169 aa9.99□□□□□ -0.81
HDAC3-213ENST00000492506 C12orf77C9JDV5 145 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms