RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 ERASQ7Z444 233 aa6.66□□□□□ -1.34
HDAC3-212ENST00000492407 LHFPL1Q86WI0 220 aa6.66□□□□□ -1.34
HDAC3-212ENST00000492407 FAM219AQ8IW50 185 aa6.66□□□□□ -1.34
HDAC3-212ENST00000492407 STHQ8IWL8 128 aa6.66□□□□□ -1.34
HDAC3-212ENST00000492407 GBGT1Q8N5D6 347 aa6.66□□□□□ -1.34
HDAC3-212ENST00000492407 SLC35G3Q8N808 338 aa6.66□□□□□ -1.34
HDAC3-212ENST00000492407 PSMG3Q9BT73 122 aaPredicted RBP6.66□□□□□ -1.34
HDAC3-212ENST00000492407 KRTAP3-3Q9BYR6 98 aa6.66□□□□□ -1.34
HDAC3-212ENST00000492407 KRTAP3-2Q9BYR7 98 aa6.66□□□□□ -1.34
HDAC3-212ENST00000492407 GPR132Q9UNW8 380 aa6.66□□□□□ -1.34
HDAC3-212ENST00000492407 IGHV3-49A0A0A0MS15 119 aa6.65□□□□□ -1.34
HDAC3-212ENST00000492407 C3orf85A0A1B0GTC6 90 aa6.65□□□□□ -1.34
HDAC3-212ENST00000492407 K7EQG2 157 aa6.65□□□□□ -1.34
HDAC3-212ENST00000492407 IGKV1-5P01602 117 aa6.65□□□□□ -1.34
HDAC3-212ENST00000492407 ESDP10768 282 aa6.65□□□□□ -1.34
HDAC3-212ENST00000492407 DEFB131AP59861 70 aa6.65□□□□□ -1.34
HDAC3-212ENST00000492407 PLP1P60201 277 aa6.65□□□□□ -1.34
HDAC3-212ENST00000492407 RPL11P62913 178 aaKnown RBP6.65□□□□□ -1.34
HDAC3-212ENST00000492407 KHDC3LQ587J8 217 aa6.65□□□□□ -1.34
HDAC3-212ENST00000492407 TMEM182Q6ZP80 229 aaPredicted RBP6.65□□□□□ -1.34
HDAC3-212ENST00000492407 TRPT1Q86TN4 253 aaKnown RBP6.65□□□□□ -1.34
HDAC3-212ENST00000492407 SMIM20Q8N5G0 67 aa6.65□□□□□ -1.34
HDAC3-212ENST00000492407 Q8NAQ8 132 aa6.65□□□□□ -1.34
HDAC3-212ENST00000492407 OR11H4Q8NGC9 324 aa6.65□□□□□ -1.34
HDAC3-212ENST00000492407 GPR146Q96CH1 333 aa6.65□□□□□ -1.34
HDAC3-212ENST00000492407 METTL26Q96S19 204 aa6.65□□□□□ -1.34
HDAC3-212ENST00000492407 ENY2Q9NPA8 101 aa6.65□□□□□ -1.34
HDAC3-212ENST00000492407 DOK5Q9P104 306 aa6.65□□□□□ -1.34
HDAC3-212ENST00000492407 APLNQ9ULZ1 77 aa6.65□□□□□ -1.34
HDAC3-212ENST00000492407 FRAS1Q86XX4 4008 aa6.65□□□□□ -1.35
HDAC3-212ENST00000492407 IGKV3-7A0A075B6H7 116 aa6.64□□□□□ -1.35
HDAC3-212ENST00000492407 IGHV3OR16-13A0A075B7E8 117 aa6.64□□□□□ -1.35
HDAC3-212ENST00000492407 IGHV3-74A0A0B4J1X5 117 aa6.64□□□□□ -1.35
HDAC3-212ENST00000492407 A0A1B0GU03 582 aa6.64□□□□□ -1.35
HDAC3-212ENST00000492407 ZNF705EA8MWA4 302 aaPredicted RBP6.64□□□□□ -1.35
HDAC3-212ENST00000492407 DEDDO75618 318 aa6.64□□□□□ -1.35
HDAC3-212ENST00000492407 IGHV3-48P01763 117 aa6.64□□□□□ -1.35
HDAC3-212ENST00000492407 APOHP02749 345 aaPredicted RBP6.64□□□□□ -1.35
HDAC3-212ENST00000492407 RNASE2P10153 161 aaKnown RBP6.64□□□□□ -1.35
HDAC3-212ENST00000492407 HIST1H1EP10412 219 aaKnown RBP6.64□□□□□ -1.35
HDAC3-212ENST00000492407 SLC25A4P12235 298 aa6.64□□□□□ -1.35
HDAC3-212ENST00000492407 TGFBR1P36897 503 aa6.64□□□□□ -1.35
HDAC3-212ENST00000492407 AKR1C2P52895 323 aa6.64□□□□□ -1.35
HDAC3-212ENST00000492407 CLINT1Q14677 625 aa6.64□□□□□ -1.35
HDAC3-212ENST00000492407 FA2HQ7L5A8 372 aa6.64□□□□□ -1.35
HDAC3-212ENST00000492407 TMEM230Q96A57 120 aa6.64□□□□□ -1.35
HDAC3-212ENST00000492407 GPR82Q96P67 336 aa6.64□□□□□ -1.35
HDAC3-212ENST00000492407 OR5AC2Q9NZP5 309 aa6.64□□□□□ -1.35
HDAC3-212ENST00000492407 RABAC1Q9UI14 185 aa6.64□□□□□ -1.35
HDAC3-212ENST00000492407 U3KQE9 123 aa6.64□□□□□ -1.35
HDAC3-212ENST00000492407 TRAV10A0A0B4J240 114 aa6.63□□□□□ -1.35
HDAC3-212ENST00000492407 CDS2O95674 445 aa6.63□□□□□ -1.35
HDAC3-212ENST00000492407 GIG44P09565 113 aaPredicted RBP6.63□□□□□ -1.35
HDAC3-212ENST00000492407 SULT1A3P0DMM9 295 aa6.63□□□□□ -1.35
HDAC3-212ENST00000492407 SULT1A4P0DMN0 295 aa6.63□□□□□ -1.35
HDAC3-212ENST00000492407 PGAM2P15259 253 aa6.63□□□□□ -1.35
HDAC3-212ENST00000492407 ELK1P19419 428 aa6.63□□□□□ -1.35
HDAC3-212ENST00000492407 AZU1P20160 251 aa6.63□□□□□ -1.35
HDAC3-212ENST00000492407 P2RY1P47900 373 aa6.63□□□□□ -1.35
HDAC3-212ENST00000492407 YPEL3P61236 119 aaPredicted RBP6.63□□□□□ -1.35
HDAC3-212ENST00000492407 LSM3P62310 102 aaKnown RBP6.63□□□□□ -1.35
HDAC3-212ENST00000492407 SSBP1Q04837 148 aaKnown RBP6.63□□□□□ -1.35
HDAC3-212ENST00000492407 GGNBP1Q5YKI7 109 aa6.63□□□□□ -1.35
HDAC3-212ENST00000492407 LINC00336Q6ZUF6 198 aa6.63□□□□□ -1.35
HDAC3-212ENST00000492407 DNAH10Q8IVF4 4471 aa6.63□□□□□ -1.35
HDAC3-212ENST00000492407 DCANP1Q8TF63 244 aa6.63□□□□□ -1.35
HDAC3-212ENST00000492407 RNF126Q9BV68 326 aa6.63□□□□□ -1.35
HDAC3-212ENST00000492407 C1QTNF4Q9BXJ3 329 aa6.63□□□□□ -1.35
HDAC3-212ENST00000492407 MTFP1Q9UDX5 166 aa6.63□□□□□ -1.35
HDAC3-212ENST00000492407 SS18L2Q9UHA2 77 aa6.63□□□□□ -1.35
HDAC3-212ENST00000492407 HECTD4Q9Y4D8 3996 aa6.62□□□□□ -1.35
HDAC3-212ENST00000492407 IGLL5B9A064 214 aa6.62□□□□□ -1.35
HDAC3-212ENST00000492407 M0QYG6 137 aa6.62□□□□□ -1.35
HDAC3-212ENST00000492407 IGKV1-17P01599 117 aa6.62□□□□□ -1.35
HDAC3-212ENST00000492407 GIPP09681 153 aaPredicted RBP6.62□□□□□ -1.35
HDAC3-212ENST00000492407 PMCHP20382 165 aa6.62□□□□□ -1.35
HDAC3-212ENST00000492407 TNFSF8P32971 234 aa6.62□□□□□ -1.35
HDAC3-212ENST00000492407 OPRK1P41145 380 aa6.62□□□□□ -1.35
HDAC3-212ENST00000492407 TAS2R30P59541 319 aa6.62□□□□□ -1.35
HDAC3-212ENST00000492407 PRR20EP86478 221 aa6.62□□□□□ -1.35
HDAC3-212ENST00000492407 PRR20CP86479 221 aa6.62□□□□□ -1.35
HDAC3-212ENST00000492407 PRR20DP86480 221 aa6.62□□□□□ -1.35
HDAC3-212ENST00000492407 PRR20BP86481 221 aa6.62□□□□□ -1.35
HDAC3-212ENST00000492407 PRR20AP86496 221 aa6.62□□□□□ -1.35
HDAC3-212ENST00000492407 C2orf83Q53S99 150 aa6.62□□□□□ -1.35
HDAC3-212ENST00000492407 FAM24BQ8N5W8 94 aa6.62□□□□□ -1.35
HDAC3-212ENST00000492407 TMEM229BQ8NBD8 167 aa6.62□□□□□ -1.35
HDAC3-212ENST00000492407 CSNK1G2-AS1Q8NCQ2 148 aa6.62□□□□□ -1.35
HDAC3-212ENST00000492407 OR1S2Q8NGQ3 325 aa6.62□□□□□ -1.35
HDAC3-212ENST00000492407 Q8WTZ3 238 aa6.62□□□□□ -1.35
HDAC3-212ENST00000492407 TMEM126AQ9H061 195 aa6.62□□□□□ -1.35
HDAC3-212ENST00000492407 FNDC4Q9H6D8 234 aaPredicted RBP6.62□□□□□ -1.35
HDAC3-212ENST00000492407 MRPL16Q9NX20 251 aaKnown RBP6.62□□□□□ -1.35
HDAC3-212ENST00000492407 VAX2Q9UIW0 290 aa6.62□□□□□ -1.35
HDAC3-212ENST00000492407 V9GYH0 126 aa6.62□□□□□ -1.35
HDAC3-212ENST00000492407 X6R8D5 127 aa6.62□□□□□ -1.35
HDAC3-212ENST00000492407 IGHV4-28A0A0C4DH34 117 aa6.61□□□□□ -1.35
HDAC3-212ENST00000492407 IGHV3-66A0A0C4DH42 116 aa6.61□□□□□ -1.35
HDAC3-212ENST00000492407 F5H768 121 aa6.61□□□□□ -1.35
HDAC3-212ENST00000492407 G3V3Q6 166 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms