RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 FAM210BQ96KR6 192 aa19.31■□□□□ 0.68
SH3GL3-204ENST00000492099 THAP6Q8TBB0 222 aa19.3■□□□□ 0.68
SH3GL3-204ENST00000492099 LINC01587Q99440 93 aa19.3■□□□□ 0.68
SH3GL3-204ENST00000492099 ZNF586Q9NXT0 402 aa19.3■□□□□ 0.68
SH3GL3-204ENST00000492099 PLA2G2EQ9NZK7 142 aa19.3■□□□□ 0.68
SH3GL3-204ENST00000492099 TMEM14CQ9P0S9 112 aa19.3■□□□□ 0.68
SH3GL3-204ENST00000492099 PRB4P10163 310 aaPredicted RBP19.29■□□□□ 0.68
SH3GL3-204ENST00000492099 DAD1P61803 113 aa19.29■□□□□ 0.68
SH3GL3-204ENST00000492099 PPP1R1CQ8WVI7 109 aa19.29■□□□□ 0.68
SH3GL3-204ENST00000492099 VPS13DQ5THJ4 4388 aa19.28■□□□□ 0.68
SH3GL3-204ENST00000492099 LYRM9A8MSI8 78 aa19.28■□□□□ 0.68
SH3GL3-204ENST00000492099 PRAC2D3DTV9 90 aa19.28■□□□□ 0.68
SH3GL3-204ENST00000492099 PRM2P04554 102 aa19.28■□□□□ 0.68
SH3GL3-204ENST00000492099 PET100P0DJ07 73 aa19.28■□□□□ 0.68
SH3GL3-204ENST00000492099 TAS2R60P59551 318 aa19.28■□□□□ 0.68
SH3GL3-204ENST00000492099 CLINT1Q14677 625 aa19.28■□□□□ 0.68
SH3GL3-204ENST00000492099 BIRC6Q9NR09 4857 aa19.27■□□□□ 0.68
SH3GL3-204ENST00000492099 TRBV19A0A075B6N1 114 aa19.27■□□□□ 0.68
SH3GL3-204ENST00000492099 P0DMU3 169 aa19.27■□□□□ 0.68
SH3GL3-204ENST00000492099 FAM231AP0DMU4 169 aa19.27■□□□□ 0.68
SH3GL3-204ENST00000492099 FAM231CP0DMU5 169 aa19.27■□□□□ 0.68
SH3GL3-204ENST00000492099 HIST1H1EP10412 219 aaKnown RBP19.27■□□□□ 0.68
SH3GL3-204ENST00000492099 C20orf144Q9BQM9 153 aa19.27■□□□□ 0.68
SH3GL3-204ENST00000492099 KCNIP2Q9NS61 270 aa19.27■□□□□ 0.68
SH3GL3-204ENST00000492099 MRPL53Q96EL3 112 aaKnown RBP19.26■□□□□ 0.67
SH3GL3-204ENST00000492099 WDR61Q9GZS3 305 aaKnown RBP19.26■□□□□ 0.67
SH3GL3-204ENST00000492099 AZU1P20160 251 aa19.25■□□□□ 0.67
SH3GL3-204ENST00000492099 PDE6HQ13956 83 aa19.25■□□□□ 0.67
SH3GL3-204ENST00000492099 GCSAMLQ5JQS6 135 aa19.25■□□□□ 0.67
SH3GL3-204ENST00000492099 MPC2O95563 127 aa19.24■□□□□ 0.67
SH3GL3-204ENST00000492099 HTN3P15516 51 aa19.24■□□□□ 0.67
SH3GL3-204ENST00000492099 PRELID1Q9Y255 219 aa19.24■□□□□ 0.67
SH3GL3-204ENST00000492099 TIMM9Q9Y5J7 89 aa19.24■□□□□ 0.67
SH3GL3-204ENST00000492099 C17orf112F2Z3M2 114 aa19.23■□□□□ 0.67
SH3GL3-204ENST00000492099 H7BYZ3 331 aa19.23■□□□□ 0.67
SH3GL3-204ENST00000492099 HTN1P15515 57 aa19.23■□□□□ 0.67
SH3GL3-204ENST00000492099 C16orf74Q96GX8 76 aa19.23■□□□□ 0.67
SH3GL3-204ENST00000492099 ODF3Q96PU9 254 aa19.23■□□□□ 0.67
SH3GL3-204ENST00000492099 PLAC8L1A1L4L8 177 aa19.22■□□□□ 0.67
SH3GL3-204ENST00000492099 NPIPB6E9PJ23 425 aa19.22■□□□□ 0.67
SH3GL3-204ENST00000492099 PYYP10082 97 aa19.22■□□□□ 0.67
SH3GL3-204ENST00000492099 ZNF493Q6ZR52 646 aa19.22■□□□□ 0.67
SH3GL3-204ENST00000492099 POM121L12Q8N7R1 296 aa19.22■□□□□ 0.67
SH3GL3-204ENST00000492099 ATP5SQ99766 215 aa19.22■□□□□ 0.67
SH3GL3-204ENST00000492099 NDUFB4O95168 129 aa19.21■□□□□ 0.67
SH3GL3-204ENST00000492099 LEPP41159 167 aa19.21■□□□□ 0.67
SH3GL3-204ENST00000492099 SLC25A2Q9BXI2 301 aa19.21■□□□□ 0.67
SH3GL3-204ENST00000492099 PARD6GQ9BYG4 376 aaPredicted RBP19.21■□□□□ 0.67
SH3GL3-204ENST00000492099 HSPB11Q9Y547 144 aa19.21■□□□□ 0.67
SH3GL3-204ENST00000492099 CT45A10P0DMU9 189 aa19.2■□□□□ 0.66
SH3GL3-204ENST00000492099 KIR3DS1Q14943 382 aa19.2■□□□□ 0.66
SH3GL3-204ENST00000492099 GFI1BQ5VTD9 330 aa19.2■□□□□ 0.66
SH3GL3-204ENST00000492099 MIR17HGQ75NE6 70 aa19.2■□□□□ 0.66
SH3GL3-204ENST00000492099 BLNKQ8WV28 456 aa19.2■□□□□ 0.66
SH3GL3-204ENST00000492099 MRPL32Q9BYC8 188 aaKnown RBP19.2■□□□□ 0.66
SH3GL3-204ENST00000492099 AAMDCQ9H7C9 122 aa19.2■□□□□ 0.66
SH3GL3-204ENST00000492099 TIMM8BQ9Y5J9 83 aaPredicted RBP19.2■□□□□ 0.66
SH3GL3-204ENST00000492099 M0R3E3 92 aa19.19■□□□□ 0.66
SH3GL3-204ENST00000492099 DEFB130BP0DP73 79 aa19.19■□□□□ 0.66
SH3GL3-204ENST00000492099 DEFB130AP0DP74 79 aa19.19■□□□□ 0.66
SH3GL3-204ENST00000492099 RPL12P30050 165 aaKnown RBP19.19■□□□□ 0.66
SH3GL3-204ENST00000492099 TMEM263Q8WUH6 116 aaKnown RBP19.19■□□□□ 0.66
SH3GL3-204ENST00000492099 FAM167A-AS1Q96KT0 104 aa19.19■□□□□ 0.66
SH3GL3-204ENST00000492099 OR51M1Q9H341 326 aa19.19■□□□□ 0.66
SH3GL3-204ENST00000492099 RNASE8Q8TDE3 154 aaKnown RBP19.18■□□□□ 0.66
SH3GL3-204ENST00000492099 IFNA5P01569 189 aa19.17■□□□□ 0.66
SH3GL3-204ENST00000492099 NBEAP1P0C6P0 100 aa19.17■□□□□ 0.66
SH3GL3-204ENST00000492099 TMEM88Q6PEY1 159 aa19.17■□□□□ 0.66
SH3GL3-204ENST00000492099 CCDC28AQ8IWP9 274 aa19.17■□□□□ 0.66
SH3GL3-204ENST00000492099 LINC00477Q96M19 166 aa19.17■□□□□ 0.66
SH3GL3-204ENST00000492099 MBD2Q9UBB5 411 aa19.17■□□□□ 0.66
SH3GL3-204ENST00000492099 FUT9Q9Y231 359 aa19.17■□□□□ 0.66
SH3GL3-204ENST00000492099 FCN2Q15485 313 aa19.16■□□□□ 0.66
SH3GL3-204ENST00000492099 EXOC3-AS1Q8N2X6 119 aa19.16■□□□□ 0.66
SH3GL3-204ENST00000492099 SCGB1C1Q8TD33 95 aa19.16■□□□□ 0.66
SH3GL3-204ENST00000492099 PAXXQ9BUH6 204 aa19.16■□□□□ 0.66
SH3GL3-204ENST00000492099 J3KRW8 73 aa19.15■□□□□ 0.66
SH3GL3-204ENST00000492099 CBY3A6NI87 242 aa19.14■□□□□ 0.65
SH3GL3-204ENST00000492099 PTTG1O95997 202 aa19.14■□□□□ 0.65
SH3GL3-204ENST00000492099 ERCC8Q13216 396 aa19.14■□□□□ 0.65
SH3GL3-204ENST00000492099 ICAM4Q14773 271 aa19.14■□□□□ 0.65
SH3GL3-204ENST00000492099 C15orf53Q8NAA6 179 aa19.14■□□□□ 0.65
SH3GL3-204ENST00000492099 SMIM3Q9BZL3 60 aa19.14■□□□□ 0.65
SH3GL3-204ENST00000492099 NOP10Q9NPE3 64 aaKnown RBP19.14■□□□□ 0.65
SH3GL3-204ENST00000492099 ALG5Q9Y673 324 aa19.14■□□□□ 0.65
SH3GL3-204ENST00000492099 DNAH6Q9C0G6 4158 aa19.14■□□□□ 0.65
SH3GL3-204ENST00000492099 TRAV12-3A0A0B4J271 114 aa19.13■□□□□ 0.65
SH3GL3-204ENST00000492099 SLC25A5P05141 298 aaKnown RBP19.13■□□□□ 0.65
SH3GL3-204ENST00000492099 ATP5G1P05496 136 aa19.13■□□□□ 0.65
SH3GL3-204ENST00000492099 ATP5G3P48201 142 aa19.13■□□□□ 0.65
SH3GL3-204ENST00000492099 FFAR4Q5NUL3 377 aa19.13■□□□□ 0.65
SH3GL3-204ENST00000492099 UBE2DNLQ8IWF7 75 aa19.13■□□□□ 0.65
SH3GL3-204ENST00000492099 RNF141Q8WVD5 230 aa19.13■□□□□ 0.65
SH3GL3-204ENST00000492099 PYGO2Q9BRQ0 406 aa19.13■□□□□ 0.65
SH3GL3-204ENST00000492099 DNAH10Q8IVF4 4471 aa19.12■□□□□ 0.65
SH3GL3-204ENST00000492099 FRAS1Q86XX4 4008 aa19.12■□□□□ 0.65
SH3GL3-204ENST00000492099 FXYD5Q96DB9 178 aa19.12■□□□□ 0.65
SH3GL3-204ENST00000492099 AGPAT4-IT1Q9H0P7 198 aa19.12■□□□□ 0.65
SH3GL3-204ENST00000492099 F5H768 121 aa19.11■□□□□ 0.65
SH3GL3-204ENST00000492099 OR7C2O60412 319 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms