RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 RBMY1BA6NDE4 496 aaKnown RBP10.15□□□□□ -0.78
CDK9-204ENST00000491521 RBMY1EA6NEQ0 496 aaKnown RBP10.15□□□□□ -0.78
CDK9-204ENST00000491521 TSPAN4O14817 238 aa10.15□□□□□ -0.78
CDK9-204ENST00000491521 RBMY1DP0C7P1 496 aaKnown RBP10.15□□□□□ -0.78
CDK9-204ENST00000491521 ID1P41134 155 aa10.15□□□□□ -0.78
CDK9-204ENST00000491521 PSG9Q00887 426 aa10.15□□□□□ -0.78
CDK9-204ENST00000491521 CST9LP1Q5W188 147 aa10.15□□□□□ -0.78
CDK9-204ENST00000491521 IGFL4Q6B9Z1 124 aa10.15□□□□□ -0.78
CDK9-204ENST00000491521 AAMDCQ9H7C9 122 aa10.15□□□□□ -0.78
CDK9-204ENST00000491521 PGPA6NDG6 321 aa10.14□□□□□ -0.79
CDK9-204ENST00000491521 OR4C46A6NHA9 309 aa10.14□□□□□ -0.79
CDK9-204ENST00000491521 SLC17A3O00476 420 aa10.14□□□□□ -0.79
CDK9-204ENST00000491521 PAGE4O60829 102 aa10.14□□□□□ -0.79
CDK9-204ENST00000491521 LYPD6BQ8NI32 183 aa10.14□□□□□ -0.79
CDK9-204ENST00000491521 SUN5Q8TC36 379 aa10.14□□□□□ -0.79
CDK9-204ENST00000491521 LINC00052Q96N35 136 aa10.14□□□□□ -0.79
CDK9-204ENST00000491521 SPAG8Q99932 426 aaPredicted RBP10.14□□□□□ -0.79
CDK9-204ENST00000491521 SLC50A1Q9BRV3 221 aa10.14□□□□□ -0.79
CDK9-204ENST00000491521 EDA2RQ9HAV5 297 aa10.14□□□□□ -0.79
CDK9-204ENST00000491521 LYSTQ99698 3801 aa10.14□□□□□ -0.79
CDK9-204ENST00000491521 K7EQG2 157 aa10.13□□□□□ -0.79
CDK9-204ENST00000491521 NDUFB4O95168 129 aa10.13□□□□□ -0.79
CDK9-204ENST00000491521 SUMO1P63165 101 aaKnown RBP10.13□□□□□ -0.79
CDK9-204ENST00000491521 PDE6HQ13956 83 aa10.13□□□□□ -0.79
CDK9-204ENST00000491521 ICAM4Q14773 271 aa10.13□□□□□ -0.79
CDK9-204ENST00000491521 SAMD13Q5VXD3 122 aa10.13□□□□□ -0.79
CDK9-204ENST00000491521 EXOC3-AS1Q8N2X6 119 aa10.13□□□□□ -0.79
CDK9-204ENST00000491521 EIF5A2Q9GZV4 153 aaKnown RBP10.13□□□□□ -0.79
CDK9-204ENST00000491521 Q9H3A6 140 aa10.13□□□□□ -0.79
CDK9-204ENST00000491521 MANBALQ9NQG1 85 aa10.13□□□□□ -0.79
CDK9-204ENST00000491521 ZNF331Q9NQX6 463 aaPredicted RBP10.13□□□□□ -0.79
CDK9-204ENST00000491521 YTHDF2Q9Y5A9 579 aaKnown RBP10.13□□□□□ -0.79
CDK9-204ENST00000491521 A0A1W2PRE2 83 aa10.12□□□□□ -0.79
CDK9-204ENST00000491521 RBFOX3A6NFN3 312 aa10.12□□□□□ -0.79
CDK9-204ENST00000491521 FAM74A7A6NL05 159 aa10.12□□□□□ -0.79
CDK9-204ENST00000491521 ISLRO14498 428 aa10.12□□□□□ -0.79
CDK9-204ENST00000491521 ZNF253O75346 499 aa10.12□□□□□ -0.79
CDK9-204ENST00000491521 HLA-DMBP28068 263 aa10.12□□□□□ -0.79
CDK9-204ENST00000491521 SNRPD3P62318 126 aaKnown RBP10.12□□□□□ -0.79
CDK9-204ENST00000491521 LINC00322Q6ZN03 302 aaPredicted RBP10.12□□□□□ -0.79
CDK9-204ENST00000491521 LYPD1Q8N2G4 141 aa10.12□□□□□ -0.79
CDK9-204ENST00000491521 RNF182Q8N6D2 247 aa10.12□□□□□ -0.79
CDK9-204ENST00000491521 CMTM2Q8TAZ6 248 aa10.12□□□□□ -0.79
CDK9-204ENST00000491521 DCANP1Q8TF63 244 aa10.12□□□□□ -0.79
CDK9-204ENST00000491521 OTORQ9NRC9 128 aa10.12□□□□□ -0.79
CDK9-204ENST00000491521 TRAV2A0A0B4J234 112 aa10.11□□□□□ -0.79
CDK9-204ENST00000491521 TRAV8-2A0A0B4J237 113 aa10.11□□□□□ -0.79
CDK9-204ENST00000491521 SLC25A5P05141 298 aaKnown RBP10.11□□□□□ -0.79
CDK9-204ENST00000491521 ZNF688P0C7X2 276 aa10.11□□□□□ -0.79
CDK9-204ENST00000491521 CSN1S1P47710 185 aa10.11□□□□□ -0.79
CDK9-204ENST00000491521 PMS2P11Q13670 270 aa10.11□□□□□ -0.79
CDK9-204ENST00000491521 PSG3Q16557 428 aa10.11□□□□□ -0.79
CDK9-204ENST00000491521 RARRES2Q99969 163 aa10.11□□□□□ -0.79
CDK9-204ENST00000491521 NKX6-2Q9C056 277 aaPredicted RBP10.11□□□□□ -0.79
CDK9-204ENST00000491521 CLEC5AQ9NY25 188 aa10.11□□□□□ -0.79
CDK9-204ENST00000491521 VAX2Q9UIW0 290 aa10.11□□□□□ -0.79
CDK9-204ENST00000491521 RPH3ALQ9UNE2 315 aa10.11□□□□□ -0.79
CDK9-204ENST00000491521 C11orf94C9JXX5 98 aa10.1□□□□□ -0.79
CDK9-204ENST00000491521 SOCS3O14543 225 aa10.1□□□□□ -0.79
CDK9-204ENST00000491521 BCL2P10415 239 aa10.1□□□□□ -0.79
CDK9-204ENST00000491521 TAGLN2P37802 199 aaKnown RBP10.1□□□□□ -0.79
CDK9-204ENST00000491521 ATP5G3P48201 142 aa10.1□□□□□ -0.79
CDK9-204ENST00000491521 CMC4P56277 68 aaPredicted RBP10.1□□□□□ -0.79
CDK9-204ENST00000491521 PSMG4Q5JS54 123 aa10.1□□□□□ -0.79
CDK9-204ENST00000491521 TOR2AQ5JU69 321 aa10.1□□□□□ -0.79
CDK9-204ENST00000491521 FAM24BQ8N5W8 94 aa10.1□□□□□ -0.79
CDK9-204ENST00000491521 ZNF738Q8NE65 137 aa10.1□□□□□ -0.79
CDK9-204ENST00000491521 RXFP4Q8TDU9 374 aa10.1□□□□□ -0.79
CDK9-204ENST00000491521 FAM210AQ96ND0 272 aa10.1□□□□□ -0.79
CDK9-204ENST00000491521 PRELID1Q9Y255 219 aa10.1□□□□□ -0.79
CDK9-204ENST00000491521 PLECQ15149 4684 aaKnown RBP10.09□□□□□ -0.79
CDK9-204ENST00000491521 LOC102724200A0A096LPH7 203 aaPredicted RBP10.09□□□□□ -0.79
CDK9-204ENST00000491521 LOC102723971A0A1B0GUV8 181 aa10.09□□□□□ -0.79
CDK9-204ENST00000491521 ZNF705FA8MVS1 300 aaPredicted RBP10.09□□□□□ -0.79
CDK9-204ENST00000491521 GGTLC3B5MD39 225 aa10.09□□□□□ -0.79
CDK9-204ENST00000491521 M0R3E3 92 aa10.09□□□□□ -0.79
CDK9-204ENST00000491521 PRB4P10163 310 aaPredicted RBP10.09□□□□□ -0.79
CDK9-204ENST00000491521 DEFB131AP59861 70 aa10.09□□□□□ -0.79
CDK9-204ENST00000491521 PEA15Q15121 130 aa10.09□□□□□ -0.79
CDK9-204ENST00000491521 C20orf173Q96LM9 149 aa10.09□□□□□ -0.79
CDK9-204ENST00000491521 ARL2-SNX15V9GYD0 113 aa10.09□□□□□ -0.79
CDK9-204ENST00000491521 F6UZH7 168 aa10.08□□□□□ -0.8
CDK9-204ENST00000491521 MEF2BQ02080 365 aaPredicted RBP10.08□□□□□ -0.8
CDK9-204ENST00000491521 ZNF506Q5JVG8 444 aa10.08□□□□□ -0.8
CDK9-204ENST00000491521 C5orf17Q8NAS9 161 aa10.08□□□□□ -0.8
CDK9-204ENST00000491521 RPUSD4Q96CM3 377 aaKnown RBP10.08□□□□□ -0.8
CDK9-204ENST00000491521 TXNDC17Q9BRA2 123 aa10.08□□□□□ -0.8
CDK9-204ENST00000491521 EPDR1Q9UM22 224 aa10.08□□□□□ -0.8
CDK9-204ENST00000491521 HYDINQ4G0P3 5121 aa10.07□□□□□ -0.8
CDK9-204ENST00000491521 LINC00862A6NCI5 91 aa10.07□□□□□ -0.8
CDK9-204ENST00000491521 GNG5P63218 68 aa10.07□□□□□ -0.8
CDK9-204ENST00000491521 COMMD7Q86VX2 200 aa10.07□□□□□ -0.8
CDK9-204ENST00000491521 TREM1Q9NP99 234 aa10.07□□□□□ -0.8
CDK9-204ENST00000491521 RAB19A4D1S5 217 aa10.06□□□□□ -0.8
CDK9-204ENST00000491521 PRAC2D3DTV9 90 aa10.06□□□□□ -0.8
CDK9-204ENST00000491521 K7EQM0 130 aa10.06□□□□□ -0.8
CDK9-204ENST00000491521 PDE6DO43924 150 aa10.06□□□□□ -0.8
CDK9-204ENST00000491521 RPL35AP18077 110 aaKnown RBP10.06□□□□□ -0.8
CDK9-204ENST00000491521 CEBPGP53567 150 aa10.06□□□□□ -0.8
CDK9-204ENST00000491521 EBLN2Q6P2I7 272 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms