RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 LYZL1Q6UWQ5 148 aa15.27■□□□□ 0.03
SNAPC3-206ENST00000490969 GFRALQ6UXV0 394 aa15.27■□□□□ 0.03
SNAPC3-206ENST00000490969 Q9UFV3 132 aa15.27■□□□□ 0.03
SNAPC3-206ENST00000490969 PPIAL4CA0A0B4J2A2 164 aa15.26■□□□□ 0.03
SNAPC3-206ENST00000490969 DKK2Q9UBU2 259 aa15.26■□□□□ 0.03
SNAPC3-206ENST00000490969 NDUFS7O75251 213 aa15.26■□□□□ 0.03
SNAPC3-206ENST00000490969 FCN3O75636 299 aa15.26■□□□□ 0.03
SNAPC3-206ENST00000490969 GCSHP23434 173 aa15.26■□□□□ 0.03
SNAPC3-206ENST00000490969 FCGR2BP31994 310 aaPredicted RBP15.26■□□□□ 0.03
SNAPC3-206ENST00000490969 MRPL51Q4U2R6 128 aaKnown RBP15.26■□□□□ 0.03
SNAPC3-206ENST00000490969 LINC00311Q8N616 119 aa15.26■□□□□ 0.03
SNAPC3-206ENST00000490969 NGBQ9NPG2 151 aa15.26■□□□□ 0.03
SNAPC3-206ENST00000490969 IGHV3-72A0A0B4J1Y9 119 aa15.25■□□□□ 0.03
SNAPC3-206ENST00000490969 CT45A10P0DMU9 189 aa15.25■□□□□ 0.03
SNAPC3-206ENST00000490969 MC5RP33032 325 aa15.25■□□□□ 0.03
SNAPC3-206ENST00000490969 SIGLEC15Q6ZMC9 328 aa15.25■□□□□ 0.03
SNAPC3-206ENST00000490969 TMEM189A5PLL7 270 aa15.25■□□□□ 0.03
SNAPC3-206ENST00000490969 FXYD2P54710 66 aa15.25■□□□□ 0.03
SNAPC3-206ENST00000490969 BCL6BQ8N143 479 aaPredicted RBP15.25■□□□□ 0.03
SNAPC3-206ENST00000490969 TMSB15BA0A087X1C1 80 aa15.24■□□□□ 0.03
SNAPC3-206ENST00000490969 AZU1P20160 251 aa15.24■□□□□ 0.03
SNAPC3-206ENST00000490969 TMEM190Q8WZ59 177 aa15.24■□□□□ 0.03
SNAPC3-206ENST00000490969 TNFRSF14Q92956 283 aa15.24■□□□□ 0.03
SNAPC3-206ENST00000490969 C8orf49Q96NF6 230 aa15.24■□□□□ 0.03
SNAPC3-206ENST00000490969 TMEM133Q9H2Q1 129 aa15.24■□□□□ 0.03
SNAPC3-206ENST00000490969 WFDC3Q8IUB2 231 aa15.24■□□□□ 0.03
SNAPC3-206ENST00000490969 SCGB1A1P11684 91 aa15.23■□□□□ 0.03
SNAPC3-206ENST00000490969 CCL8P80075 99 aa15.23■□□□□ 0.03
SNAPC3-206ENST00000490969 C8orf31Q8N9H6 132 aa15.23■□□□□ 0.03
SNAPC3-206ENST00000490969 RASL11BQ9BPW5 248 aa15.23■□□□□ 0.03
SNAPC3-206ENST00000490969 GTSF1LQ9H1H1 148 aa15.23■□□□□ 0.03
SNAPC3-206ENST00000490969 PRRG2O14669 202 aa15.23■□□□□ 0.03
SNAPC3-206ENST00000490969 RBP4P02753 201 aa15.23■□□□□ 0.03
SNAPC3-206ENST00000490969 SMKR1H3BMG3 65 aa15.22■□□□□ 0.03
SNAPC3-206ENST00000490969 NPYP01303 97 aa15.22■□□□□ 0.03
SNAPC3-206ENST00000490969 CNTFRP26992 372 aa15.22■□□□□ 0.03
SNAPC3-206ENST00000490969 PIFOQ8TCI5 191 aa15.22■□□□□ 0.03
SNAPC3-206ENST00000490969 SIGMAR1Q99720 223 aa15.22■□□□□ 0.03
SNAPC3-206ENST00000490969 SHANK2-AS3Q9BTD1 123 aa15.22■□□□□ 0.03
SNAPC3-206ENST00000490969 HIGD1BQ9P298 99 aa15.22■□□□□ 0.03
SNAPC3-206ENST00000490969 PKD1L2Q7Z442 2459 aa15.22■□□□□ 0.03
SNAPC3-206ENST00000490969 WI2-2373I1.2A0A1W2PRP0 233 aa15.22■□□□□ 0.03
SNAPC3-206ENST00000490969 K7ERJ3 54 aa15.22■□□□□ 0.03
SNAPC3-206ENST00000490969 LYPD1Q8N2G4 141 aa15.22■□□□□ 0.03
SNAPC3-206ENST00000490969 VGLL1Q99990 258 aa15.22■□□□□ 0.03
SNAPC3-206ENST00000490969 IGKV2D-26A0A0A0MRZ7 120 aa15.21■□□□□ 0.03
SNAPC3-206ENST00000490969 M0R3E3 92 aa15.21■□□□□ 0.03
SNAPC3-206ENST00000490969 CKS2P33552 79 aa15.21■□□□□ 0.03
SNAPC3-206ENST00000490969 C18orf15Q96N68 181 aa15.21■□□□□ 0.03
SNAPC3-206ENST00000490969 C3orf36Q3SXR2 165 aa15.21■□□□□ 0.03
SNAPC3-206ENST00000490969 CHAC1Q9BUX1 264 aa15.21■□□□□ 0.03
SNAPC3-206ENST00000490969 IGKV1-17P01599 117 aa15.2■□□□□ 0.02
SNAPC3-206ENST00000490969 SMAGPQ0VAQ4 97 aa15.2■□□□□ 0.02
SNAPC3-206ENST00000490969 PHLDA1Q8WV24 401 aaPredicted RBP15.2■□□□□ 0.02
SNAPC3-206ENST00000490969 TTTY13Q9BZ97 58 aa15.2■□□□□ 0.02
SNAPC3-206ENST00000490969 PKDREJQ9NTG1 2253 aa15.2■□□□□ 0.02
SNAPC3-206ENST00000490969 TEX22C9J3V5 150 aa15.2■□□□□ 0.02
SNAPC3-206ENST00000490969 H3BRN7 92 aa15.2■□□□□ 0.02
SNAPC3-206ENST00000490969 CRYGBP07316 175 aa15.2■□□□□ 0.02
SNAPC3-206ENST00000490969 SIGLEC9Q9Y336 463 aa15.2■□□□□ 0.02
SNAPC3-206ENST00000490969 I3L2K1 104 aa15.19■□□□□ 0.02
SNAPC3-206ENST00000490969 SH2D1AO60880 128 aa15.19■□□□□ 0.02
SNAPC3-206ENST00000490969 FBLL1A6NHQ2 334 aaKnown RBP15.18■□□□□ 0.02
SNAPC3-206ENST00000490969 PSMG4Q5JS54 123 aa15.18■□□□□ 0.02
SNAPC3-206ENST00000490969 HHLA3Q9XRX5 114 aa15.18■□□□□ 0.02
SNAPC3-206ENST00000490969 NDUFS8O00217 210 aa15.18■□□□□ 0.02
SNAPC3-206ENST00000490969 ODF1Q14990 250 aa15.18■□□□□ 0.02
SNAPC3-206ENST00000490969 ZMAT4Q9H898 229 aa15.18■□□□□ 0.02
SNAPC3-206ENST00000490969 TSSC4Q9Y5U2 329 aaPredicted RBP15.18■□□□□ 0.02
SNAPC3-206ENST00000490969 PPIAL4EA0A075B759 164 aa15.17■□□□□ 0.02
SNAPC3-206ENST00000490969 SHISA9B4DS77 424 aa15.17■□□□□ 0.02
SNAPC3-206ENST00000490969 PPIAL4FP0DN26 164 aa15.17■□□□□ 0.02
SNAPC3-206ENST00000490969 UCNP55089 124 aa15.17■□□□□ 0.02
SNAPC3-206ENST00000490969 CD300EQ496F6 205 aaPredicted RBP15.17■□□□□ 0.02
SNAPC3-206ENST00000490969 NHP2Q9NX24 153 aaKnown RBP15.17■□□□□ 0.02
SNAPC3-206ENST00000490969 GAGE12HA6NDE8 117 aa15.17■□□□□ 0.02
SNAPC3-206ENST00000490969 ZNF562Q6V9R5 426 aa15.17■□□□□ 0.02
SNAPC3-206ENST00000490969 SMPXQ9UHP9 88 aa15.17■□□□□ 0.02
SNAPC3-206ENST00000490969 MRPS12O15235 138 aaKnown RBP15.16■□□□□ 0.02
SNAPC3-206ENST00000490969 NDUFB3O43676 98 aa15.16■□□□□ 0.02
SNAPC3-206ENST00000490969 THBDP07204 575 aa15.16■□□□□ 0.02
SNAPC3-206ENST00000490969 DLX6P56179 175 aa15.16■□□□□ 0.02
SNAPC3-206ENST00000490969 TWIST1Q15672 202 aa15.16■□□□□ 0.02
SNAPC3-206ENST00000490969 LYPD2Q6UXB3 125 aa15.16■□□□□ 0.02
SNAPC3-206ENST00000490969 SPANXB1Q9NS25 103 aaPredicted RBP15.16■□□□□ 0.02
SNAPC3-206ENST00000490969 TRBV25-1A0A075B6N4 114 aa15.16■□□□□ 0.02
SNAPC3-206ENST00000490969 LY6DQ14210 128 aa15.16■□□□□ 0.02
SNAPC3-206ENST00000490969 PPP1R27Q86WC6 154 aa15.16■□□□□ 0.02
SNAPC3-206ENST00000490969 PRSS47A8MTI9 375 aa15.15■□□□□ 0.02
SNAPC3-206ENST00000490969 TM2D2Q9BX73 214 aa15.15■□□□□ 0.02
SNAPC3-206ENST00000490969 ACACBO00763 2458 aa15.15■□□□□ 0.02
SNAPC3-206ENST00000490969 F8W1H4 67 aa15.15■□□□□ 0.02
SNAPC3-206ENST00000490969 WFDC2Q14508 124 aa15.15■□□□□ 0.02
SNAPC3-206ENST00000490969 FOXI2Q6ZQN5 318 aa15.15■□□□□ 0.02
SNAPC3-206ENST00000490969 CEND1Q8N111 149 aa15.15■□□□□ 0.02
SNAPC3-206ENST00000490969 E9PLD3 99 aa15.14■□□□□ 0.01
SNAPC3-206ENST00000490969 IGHV1-8P0DP01 117 aa15.14■□□□□ 0.01
SNAPC3-206ENST00000490969 CD40P25942 277 aa15.14■□□□□ 0.01
SNAPC3-206ENST00000490969 LEPP41159 167 aa15.14■□□□□ 0.01
SNAPC3-206ENST00000490969 ZNF491Q8N8L2 437 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms