RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 M0R129 80 aa2.28□□□□□ -2.04
HMGB1P38-201ENST00000490557 TPPP2P59282 170 aa2.28□□□□□ -2.04
HMGB1P38-201ENST00000490557 PCBD1P61457 104 aa2.28□□□□□ -2.04
HMGB1P38-201ENST00000490557 PKIAP61925 76 aa2.28□□□□□ -2.04
HMGB1P38-201ENST00000490557 BLCAPP62952 87 aa2.28□□□□□ -2.04
HMGB1P38-201ENST00000490557 ESRGQ1W209 222 aa2.28□□□□□ -2.04
HMGB1P38-201ENST00000490557 KRTAP13-1Q8IUC0 172 aa2.28□□□□□ -2.04
HMGB1P38-201ENST00000490557 SNRNP25Q9BV90 132 aaKnown RBP2.28□□□□□ -2.04
HMGB1P38-201ENST00000490557 SPANXDQ9BXN6 97 aa2.28□□□□□ -2.04
HMGB1P38-201ENST00000490557 SAR1AQ9NR31 198 aa2.28□□□□□ -2.04
HMGB1P38-201ENST00000490557 TAS2R4Q9NYW5 299 aa2.28□□□□□ -2.04
HMGB1P38-201ENST00000490557 DNAJC15Q9Y5T4 150 aa2.28□□□□□ -2.04
HMGB1P38-201ENST00000490557 MPC1Q9Y5U8 109 aa2.28□□□□□ -2.04
HMGB1P38-201ENST00000490557 FER1L6Q2WGJ9 1857 aa2.28□□□□□ -2.04
HMGB1P38-201ENST00000490557 KDM5CP41229 1560 aa2.27□□□□□ -2.05
HMGB1P38-201ENST00000490557 MBD5Q9P267 1494 aa2.27□□□□□ -2.05
HMGB1P38-201ENST00000490557 EML6Q6ZMW3 1958 aa2.27□□□□□ -2.05
HMGB1P38-201ENST00000490557 OBSL1O75147 1896 aa2.27□□□□□ -2.05
HMGB1P38-201ENST00000490557 IGHV3-64A0A075B6Q5 118 aa2.27□□□□□ -2.05
HMGB1P38-201ENST00000490557 A0A0J9YX75 114 aa2.27□□□□□ -2.05
HMGB1P38-201ENST00000490557 SPAARA0A1B0GVQ0 90 aa2.27□□□□□ -2.05
HMGB1P38-201ENST00000490557 YPEL1O60688 119 aa2.27□□□□□ -2.05
HMGB1P38-201ENST00000490557 CPSF4O95639 269 aaKnown RBP2.27□□□□□ -2.05
HMGB1P38-201ENST00000490557 SAA1P0DJI8 122 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P38-201ENST00000490557 SLC25A4P12235 298 aa2.27□□□□□ -2.05
HMGB1P38-201ENST00000490557 HIST1H1DP16402 221 aaKnown RBP2.27□□□□□ -2.05
HMGB1P38-201ENST00000490557 PEBP1P30086 187 aaKnown RBP2.27□□□□□ -2.05
HMGB1P38-201ENST00000490557 TMEM258P61165 79 aa2.27□□□□□ -2.05
HMGB1P38-201ENST00000490557 BTG2P78543 158 aa2.27□□□□□ -2.05
HMGB1P38-201ENST00000490557 LINC01545Q5VT33 79 aa2.27□□□□□ -2.05
HMGB1P38-201ENST00000490557 Q6ZQT0 140 aa2.27□□□□□ -2.05
HMGB1P38-201ENST00000490557 LINC00471Q8N535 108 aa2.27□□□□□ -2.05
HMGB1P38-201ENST00000490557 DPH3Q96FX2 82 aa2.27□□□□□ -2.05
HMGB1P38-201ENST00000490557 SLC35B3Q9H1N7 401 aa2.27□□□□□ -2.05
HMGB1P38-201ENST00000490557 FKBP11Q9NYL4 201 aa2.27□□□□□ -2.05
HMGB1P38-201ENST00000490557 HSPE1-MOB4S4R3N1 261 aa2.27□□□□□ -2.05
HMGB1P38-201ENST00000490557 PIK3C2AO00443 1686 aa2.27□□□□□ -2.05
HMGB1P38-201ENST00000490557 BCL9LQ86UU0 1499 aa2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 NUP210LQ5VU65 1888 aa2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 CDK5RAP2Q96SN8 1893 aa2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 MYOM3Q5VTT5 1437 aa2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 ERBINQ96RT1 1412 aa2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 KIAA1107Q9UPP5 1409 aa2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 COL5A1P20908 1838 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 TRBV20-1A0A075B6N2 111 aa2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 TRAV30A0A087WSZ9 112 aa2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 TRAV3A0A0B4J244 114 aa2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 PNMA8CA0A1B0GUJ8 204 aa2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 A0A1B0GVG6 124 aa2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 FNDC10F2Z333 226 aa2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 C17orf112F2Z3M2 114 aa2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 CCL25O15444 150 aa2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 OR1I1O60431 355 aa2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 PMP2P02689 132 aa2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 SHBGP04278 402 aa2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 CKS2P33552 79 aa2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 CIRBPQ14011 172 aaKnown RBP2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 SS18Q15532 418 aa2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 SNX29P2Q8IUI4 249 aa2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 C10orf111Q8N326 155 aa2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 CLEC2BQ92478 149 aa2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 RAB37Q96AX2 223 aa2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 MRPL57Q9BQC6 102 aaKnown RBP2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 METTL1Q9UBP6 276 aaKnown RBP2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 LSM2Q9Y333 95 aaKnown RBP2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 THADAQ6YHU6 1953 aa2.26□□□□□ -2.05
HMGB1P38-201ENST00000490557 RGS12O14924 1447 aa2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 POLEQ07864 2286 aa2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 MYH7BA7E2Y1 1941 aa2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 TRAV12-2A0A075B6T6 113 aa2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 CCDC179H3BU77 68 aa2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 M0R233 179 aa2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 ZNF737O75373 536 aa2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 TRACP01848 142 aa2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 CLPSP04118 112 aa2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 CD3DP04234 171 aa2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 CTSDP07339 412 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 MGST1P10620 155 aaKnown RBP2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 ETV6P41212 452 aa2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 CDK6Q00534 326 aa2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 ZNF90Q03938 601 aa2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 NNATQ16517 81 aa2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 PYDC2Q56P42 97 aa2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 SPANXN5Q5MJ07 72 aa2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 Q8IYB0 196 aa2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 OR5AS1Q8N127 324 aa2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 LINC00301Q8NCQ3 95 aa2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 OR2T35Q8NGX2 323 aa2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 OR5AK2Q8NH90 309 aa2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 CCL4L1Q8NHW4 92 aa2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 POP5Q969H6 163 aaKnown RBP2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 NAA60Q9H7X0 242 aa2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 C14orf132Q9NPU4 83 aa2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 IER3IP1Q9Y5U9 82 aa2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 FANCMQ8IYD8 2048 aa2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 ARHGEF28Q8N1W1 1705 aaKnown RBP2.25□□□□□ -2.05
HMGB1P38-201ENST00000490557 hDV103S1A0JD37 113 aa2.24□□□□□ -2.05
HMGB1P38-201ENST00000490557 OR51F1A6NGY5 319 aa2.24□□□□□ -2.05
HMGB1P38-201ENST00000490557 HMSDA8MTL9 139 aa2.24□□□□□ -2.05
HMGB1P38-201ENST00000490557 ZNF736B4DX44 427 aaPredicted RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms