RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 AKR1D1P51857 326 aa7.54□□□□□ -1.2
TTC28-207ENST00000490475 SELENOTP62341 195 aa7.54□□□□□ -1.2
TTC28-207ENST00000490475 CLINT1Q14677 625 aa7.54□□□□□ -1.2
TTC28-207ENST00000490475 VWC2Q2TAL6 325 aa7.54□□□□□ -1.2
TTC28-207ENST00000490475 C1orf194Q5T5A4 169 aa7.54□□□□□ -1.2
TTC28-207ENST00000490475 OR8I2Q8N0Y5 310 aa7.54□□□□□ -1.2
TTC28-207ENST00000490475 TMEM147Q9BVK8 224 aa7.54□□□□□ -1.2
TTC28-207ENST00000490475 SLC25A22Q9H936 323 aa7.54□□□□□ -1.2
TTC28-207ENST00000490475 AGRNO00468 2067 aa7.54□□□□□ -1.2
TTC28-207ENST00000490475 TRAV10A0A0B4J240 114 aa7.53□□□□□ -1.2
TTC28-207ENST00000490475 OR5G3P0C626 314 aa7.53□□□□□ -1.2
TTC28-207ENST00000490475 RAB5AP20339 215 aa7.53□□□□□ -1.2
TTC28-207ENST00000490475 PLP1P60201 277 aa7.53□□□□□ -1.2
TTC28-207ENST00000490475 HBG1P69891 147 aa7.53□□□□□ -1.2
TTC28-207ENST00000490475 HBG2P69892 147 aa7.53□□□□□ -1.2
TTC28-207ENST00000490475 ATP6V1FQ16864 119 aa7.53□□□□□ -1.2
TTC28-207ENST00000490475 DNLZQ5SXM8 178 aa7.53□□□□□ -1.2
TTC28-207ENST00000490475 SAMD13Q5VXD3 122 aa7.53□□□□□ -1.2
TTC28-207ENST00000490475 MIC13Q5XKP0 118 aa7.53□□□□□ -1.2
TTC28-207ENST00000490475 Q8NAQ8 132 aa7.53□□□□□ -1.2
TTC28-207ENST00000490475 OR5C1Q8NGR4 320 aa7.53□□□□□ -1.2
TTC28-207ENST00000490475 HIST1H2BAQ96A08 127 aa7.53□□□□□ -1.2
TTC28-207ENST00000490475 C17orf77Q96MU5 243 aa7.53□□□□□ -1.2
TTC28-207ENST00000490475 UHRF2Q96PU4 802 aa7.53□□□□□ -1.2
TTC28-207ENST00000490475 RSG1Q9BU20 258 aa7.53□□□□□ -1.2
TTC28-207ENST00000490475 SLC25A39Q9BZJ4 359 aaPredicted RBP7.53□□□□□ -1.2
TTC28-207ENST00000490475 EIF5A2Q9GZV4 153 aaKnown RBP7.53□□□□□ -1.2
TTC28-207ENST00000490475 NRN1Q9NPD7 142 aa7.53□□□□□ -1.2
TTC28-207ENST00000490475 RPS10P5Q9NQ39 176 aa7.53□□□□□ -1.2
TTC28-207ENST00000490475 TMEM242Q9NWH2 141 aa7.53□□□□□ -1.2
TTC28-207ENST00000490475 HIGD1AQ9Y241 93 aa7.53□□□□□ -1.2
TTC28-207ENST00000490475 WDR83OSQ9Y284 106 aa7.53□□□□□ -1.2
TTC28-207ENST00000490475 UBE2L5PA0A1B0GUS4 154 aa7.52□□□□□ -1.21
TTC28-207ENST00000490475 TEX48A0A1B0GUV7 120 aa7.52□□□□□ -1.21
TTC28-207ENST00000490475 KNCNA6PVL3 124 aa7.52□□□□□ -1.21
TTC28-207ENST00000490475 IGLL5B9A064 214 aa7.52□□□□□ -1.21
TTC28-207ENST00000490475 GATCO43716 136 aaKnown RBP7.52□□□□□ -1.21
TTC28-207ENST00000490475 S100PP25815 95 aa7.52□□□□□ -1.21
TTC28-207ENST00000490475 S100A7P31151 101 aa7.52□□□□□ -1.21
TTC28-207ENST00000490475 TAGLN2P37802 199 aaKnown RBP7.52□□□□□ -1.21
TTC28-207ENST00000490475 PPT1P50897 306 aa7.52□□□□□ -1.21
TTC28-207ENST00000490475 PNRC1Q12796 327 aaPredicted RBP7.52□□□□□ -1.21
TTC28-207ENST00000490475 RAB31Q13636 194 aa7.52□□□□□ -1.21
TTC28-207ENST00000490475 PSMG4Q5JS54 123 aa7.52□□□□□ -1.21
TTC28-207ENST00000490475 SOHLH1Q5JUK2 328 aa7.52□□□□□ -1.21
TTC28-207ENST00000490475 ACTL10Q5JWF8 245 aa7.52□□□□□ -1.21
TTC28-207ENST00000490475 RPP25LQ8N5L8 163 aaKnown RBP7.52□□□□□ -1.21
TTC28-207ENST00000490475 SHANK2-AS3Q9BTD1 123 aa7.52□□□□□ -1.21
TTC28-207ENST00000490475 PARD6GQ9BYG4 376 aaPredicted RBP7.52□□□□□ -1.21
TTC28-207ENST00000490475 PLECQ15149 4684 aaKnown RBP7.51□□□□□ -1.21
TTC28-207ENST00000490475 IGHV4-28A0A0C4DH34 117 aa7.51□□□□□ -1.21
TTC28-207ENST00000490475 TMEM189A5PLL7 270 aa7.51□□□□□ -1.21
TTC28-207ENST00000490475 H3BRN7 92 aa7.51□□□□□ -1.21
TTC28-207ENST00000490475 FGF7P21781 194 aa7.51□□□□□ -1.21
TTC28-207ENST00000490475 ID1P41134 155 aa7.51□□□□□ -1.21
TTC28-207ENST00000490475 RPL35P42766 123 aaKnown RBP7.51□□□□□ -1.21
TTC28-207ENST00000490475 DEFB1P60022 68 aa7.51□□□□□ -1.21
TTC28-207ENST00000490475 KHDC3LQ587J8 217 aa7.51□□□□□ -1.21
TTC28-207ENST00000490475 SPATA31B1PQ5VZV4 182 aa7.51□□□□□ -1.21
TTC28-207ENST00000490475 TMEM37Q8WXS4 190 aa7.51□□□□□ -1.21
TTC28-207ENST00000490475 TMPRSS5Q9H3S3 457 aa7.51□□□□□ -1.21
TTC28-207ENST00000490475 PLA2G2EQ9NZK7 142 aa7.51□□□□□ -1.21
TTC28-207ENST00000490475 TRAV5A0A0B4J249 113 aa7.5□□□□□ -1.21
TTC28-207ENST00000490475 RBFOX3A6NFN3 312 aa7.5□□□□□ -1.21
TTC28-207ENST00000490475 SMIM9A6NGZ8 99 aa7.5□□□□□ -1.21
TTC28-207ENST00000490475 C9JQL5 133 aa7.5□□□□□ -1.21
TTC28-207ENST00000490475 M0R036 132 aa7.5□□□□□ -1.21
TTC28-207ENST00000490475 SOCS3O14543 225 aa7.5□□□□□ -1.21
TTC28-207ENST00000490475 DEFB4AO15263 64 aa7.5□□□□□ -1.21
TTC28-207ENST00000490475 COX7A2P2O60397 106 aa7.5□□□□□ -1.21
TTC28-207ENST00000490475 EIF3GO75821 320 aaKnown RBP eCLIP7.5□□□□□ -1.21
TTC28-207ENST00000490475 GIG44P09565 113 aaPredicted RBP7.5□□□□□ -1.21
TTC28-207ENST00000490475 HLA-DMBP28068 263 aa7.5□□□□□ -1.21
TTC28-207ENST00000490475 GALR1P47211 349 aa7.5□□□□□ -1.21
TTC28-207ENST00000490475 RPL29P47914 159 aaKnown RBP7.5□□□□□ -1.21
TTC28-207ENST00000490475 PRR20EP86478 221 aa7.5□□□□□ -1.21
TTC28-207ENST00000490475 PRR20CP86479 221 aa7.5□□□□□ -1.21
TTC28-207ENST00000490475 PRR20DP86480 221 aa7.5□□□□□ -1.21
TTC28-207ENST00000490475 PRR20BP86481 221 aa7.5□□□□□ -1.21
TTC28-207ENST00000490475 PRR20AP86496 221 aa7.5□□□□□ -1.21
TTC28-207ENST00000490475 ZNF506Q5JVG8 444 aa7.5□□□□□ -1.21
TTC28-207ENST00000490475 IGFL4Q6B9Z1 124 aa7.5□□□□□ -1.21
TTC28-207ENST00000490475 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.5□□□□□ -1.21
TTC28-207ENST00000490475 LINC00305Q7Z4B0 112 aa7.5□□□□□ -1.21
TTC28-207ENST00000490475 CLUHP3Q96NS8 147 aa7.5□□□□□ -1.21
TTC28-207ENST00000490475 NEU1Q99519 415 aa7.5□□□□□ -1.21
TTC28-207ENST00000490475 PSMG3Q9BT73 122 aaPredicted RBP7.5□□□□□ -1.21
TTC28-207ENST00000490475 SMIM3Q9BZL3 60 aa7.5□□□□□ -1.21
TTC28-207ENST00000490475 WFDC1Q9HC57 220 aa7.5□□□□□ -1.21
TTC28-207ENST00000490475 DNAJC4Q9NNZ3 241 aa7.5□□□□□ -1.21
TTC28-207ENST00000490475 SLC39A9Q9NUM3 307 aa7.5□□□□□ -1.21
TTC28-207ENST00000490475 APLNQ9ULZ1 77 aa7.5□□□□□ -1.21
TTC28-207ENST00000490475 SNRPCP09234 159 aaKnown RBP7.49□□□□□ -1.21
TTC28-207ENST00000490475 RBMY1A1P0DJD3 496 aaKnown RBP7.49□□□□□ -1.21
TTC28-207ENST00000490475 RBMY1CP0DJD4 496 aa7.49□□□□□ -1.21
TTC28-207ENST00000490475 HLA-DRB4P13762 266 aa7.49□□□□□ -1.21
TTC28-207ENST00000490475 SERF2P84101 59 aa7.49□□□□□ -1.21
TTC28-207ENST00000490475 RBMY1FQ15415 496 aaKnown RBP7.49□□□□□ -1.21
TTC28-207ENST00000490475 MORN5Q5VZ52 161 aa7.49□□□□□ -1.21
TTC28-207ENST00000490475 C10orf113Q5VZT2 155 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms