RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 SLC25A5P05141 298 aaKnown RBP13.38□□□□□ -0.27
UPK3B-205ENST00000490360 VAMP1P23763 118 aa13.38□□□□□ -0.27
UPK3B-205ENST00000490360 FAUP35544 74 aaKnown RBP13.38□□□□□ -0.27
UPK3B-205ENST00000490360 MRPL23Q16540 153 aaKnown RBP13.38□□□□□ -0.27
UPK3B-205ENST00000490360 LINC00467Q9BRT7 94 aa13.38□□□□□ -0.27
UPK3B-205ENST00000490360 PARD6GQ9BYG4 376 aaPredicted RBP13.38□□□□□ -0.27
UPK3B-205ENST00000490360 PRO0255Q9UI72 69 aa13.38□□□□□ -0.27
UPK3B-205ENST00000490360 TRGV1A0A0A0MS02 117 aa13.37□□□□□ -0.27
UPK3B-205ENST00000490360 EVI2AP22794 236 aa13.37□□□□□ -0.27
UPK3B-205ENST00000490360 TEPPQ6URK8 271 aa13.37□□□□□ -0.27
UPK3B-205ENST00000490360 LYPD5Q6UWN5 251 aa13.37□□□□□ -0.27
UPK3B-205ENST00000490360 PATE2Q6UY27 113 aa13.37□□□□□ -0.27
UPK3B-205ENST00000490360 LINC00305Q7Z4B0 112 aa13.37□□□□□ -0.27
UPK3B-205ENST00000490360 ZBTB8BQ8NAP8 495 aaPredicted RBP13.37□□□□□ -0.27
UPK3B-205ENST00000490360 C11orf72Q8NBR9 251 aa13.37□□□□□ -0.27
UPK3B-205ENST00000490360 NTN5Q8WTR8 489 aaPredicted RBP13.37□□□□□ -0.27
UPK3B-205ENST00000490360 ST6GAL2Q96JF0 529 aa13.37□□□□□ -0.27
UPK3B-205ENST00000490360 NAA50Q9GZZ1 169 aaKnown RBP13.37□□□□□ -0.27
UPK3B-205ENST00000490360 GSN-AS1Q9NRJ2 163 aa13.37□□□□□ -0.27
UPK3B-205ENST00000490360 PRAC2D3DTV9 90 aa13.36□□□□□ -0.27
UPK3B-205ENST00000490360 NPIPB6E9PJ23 425 aa13.36□□□□□ -0.27
UPK3B-205ENST00000490360 CT45A10P0DMU9 189 aa13.36□□□□□ -0.27
UPK3B-205ENST00000490360 PRB4P10163 310 aaPredicted RBP13.36□□□□□ -0.27
UPK3B-205ENST00000490360 ANXA2RQ3ZCQ2 193 aa13.36□□□□□ -0.27
UPK3B-205ENST00000490360 NEGR1Q7Z3B1 354 aa13.36□□□□□ -0.27
UPK3B-205ENST00000490360 ZNF546Q86UE3 836 aa13.36□□□□□ -0.27
UPK3B-205ENST00000490360 J3KRW8 73 aa13.35□□□□□ -0.27
UPK3B-205ENST00000490360 GOSR2O14653 212 aa13.35□□□□□ -0.27
UPK3B-205ENST00000490360 SPINK4O60575 86 aa13.35□□□□□ -0.27
UPK3B-205ENST00000490360 ID3Q02535 119 aa13.35□□□□□ -0.27
UPK3B-205ENST00000490360 GUK1Q16774 197 aa13.35□□□□□ -0.27
UPK3B-205ENST00000490360 EIF4E3Q8N5X7 224 aaKnown RBP13.35□□□□□ -0.27
UPK3B-205ENST00000490360 PSENENQ9NZ42 101 aa13.35□□□□□ -0.27
UPK3B-205ENST00000490360 MGAT4CQ9UBM8 478 aa13.35□□□□□ -0.27
UPK3B-205ENST00000490360 TCL1AP56279 114 aa13.34□□□□□ -0.27
UPK3B-205ENST00000490360 POLR2GP62487 172 aaKnown RBP eCLIP13.34□□□□□ -0.27
UPK3B-205ENST00000490360 C10orf126Q8N4M7 172 aa13.34□□□□□ -0.27
UPK3B-205ENST00000490360 SLC25A21Q9BQT8 299 aaPredicted RBP13.34□□□□□ -0.27
UPK3B-205ENST00000490360 HHLA3Q9XRX5 114 aa13.34□□□□□ -0.27
UPK3B-205ENST00000490360 IGLV5-52A0A0A0MRZ9 124 aa13.33□□□□□ -0.28
UPK3B-205ENST00000490360 C7orf71A4D174 169 aa13.33□□□□□ -0.28
UPK3B-205ENST00000490360 KRTAP29-1A8MX34 341 aaPredicted RBP13.33□□□□□ -0.28
UPK3B-205ENST00000490360 SFT2D2O95562 160 aa13.33□□□□□ -0.28
UPK3B-205ENST00000490360 HOXB5P09067 269 aa13.33□□□□□ -0.28
UPK3B-205ENST00000490360 IBA57Q5T440 356 aaKnown RBP13.33□□□□□ -0.28
UPK3B-205ENST00000490360 SERTAD4-AS1Q5TG53 156 aa13.33□□□□□ -0.28
UPK3B-205ENST00000490360 OR10P1Q8NGE3 313 aa13.33□□□□□ -0.28
UPK3B-205ENST00000490360 SAT2Q96F10 170 aaPredicted RBP13.33□□□□□ -0.28
UPK3B-205ENST00000490360 SMIM8Q96KF7 97 aa13.33□□□□□ -0.28
UPK3B-205ENST00000490360 LINC00854A0A1B0GVQ3 168 aa13.32□□□□□ -0.28
UPK3B-205ENST00000490360 SLC17A3O00476 420 aa13.32□□□□□ -0.28
UPK3B-205ENST00000490360 COX7A2P2O60397 106 aa13.32□□□□□ -0.28
UPK3B-205ENST00000490360 PLA2G1BP04054 148 aaKnown RBP13.32□□□□□ -0.28
UPK3B-205ENST00000490360 IGLC2P0DOY2 106 aa13.32□□□□□ -0.28
UPK3B-205ENST00000490360 CRYBA4P53673 196 aa13.32□□□□□ -0.28
UPK3B-205ENST00000490360 AP3S2P59780 193 aa13.32□□□□□ -0.28
UPK3B-205ENST00000490360 VGLL1Q99990 258 aa13.32□□□□□ -0.28
UPK3B-205ENST00000490360 RRAS2P62070 204 aaPredicted RBP13.31□□□□□ -0.28
UPK3B-205ENST00000490360 SLC38A11Q08AI6 406 aa13.31□□□□□ -0.28
UPK3B-205ENST00000490360 MRPL53Q96EL3 112 aaKnown RBP13.31□□□□□ -0.28
UPK3B-205ENST00000490360 CCDC59Q9P031 241 aaKnown RBP13.31□□□□□ -0.28
UPK3B-205ENST00000490360 KLLNB2CW77 178 aa13.3□□□□□ -0.28
UPK3B-205ENST00000490360 ZNF253O75346 499 aa13.3□□□□□ -0.28
UPK3B-205ENST00000490360 C1QBP02746 253 aa13.3□□□□□ -0.28
UPK3B-205ENST00000490360 SNRPCP09234 159 aaKnown RBP13.3□□□□□ -0.28
UPK3B-205ENST00000490360 PPP1R1AQ13522 171 aa13.3□□□□□ -0.28
UPK3B-205ENST00000490360 C10orf113Q5VZT2 155 aa13.3□□□□□ -0.28
UPK3B-205ENST00000490360 TMEM14EPQ6UXP3 125 aa13.3□□□□□ -0.28
UPK3B-205ENST00000490360 DEDD2Q8WXF8 326 aa13.3□□□□□ -0.28
UPK3B-205ENST00000490360 GGACTQ9BVM4 153 aa13.3□□□□□ -0.28
UPK3B-205ENST00000490360 KLF12Q9Y4X4 402 aa13.3□□□□□ -0.28
UPK3B-205ENST00000490360 AGPAT2O15120 278 aa13.29□□□□□ -0.28
UPK3B-205ENST00000490360 PRAF2O60831 178 aa13.29□□□□□ -0.28
UPK3B-205ENST00000490360 MPDU1O75352 247 aa13.29□□□□□ -0.28
UPK3B-205ENST00000490360 NMBP08949 121 aa13.29□□□□□ -0.28
UPK3B-205ENST00000490360 SRIP30626 198 aa13.29□□□□□ -0.28
UPK3B-205ENST00000490360 SYT8Q8NBV8 401 aa13.29□□□□□ -0.28
UPK3B-205ENST00000490360 LINC00477Q96M19 166 aa13.29□□□□□ -0.28
UPK3B-205ENST00000490360 MRPL32Q9BYC8 188 aaKnown RBP13.29□□□□□ -0.28
UPK3B-205ENST00000490360 FABP12A6NFH5 140 aa13.28□□□□□ -0.28
UPK3B-205ENST00000490360 H3BQ15 152 aa13.28□□□□□ -0.28
UPK3B-205ENST00000490360 H3BTX0 84 aa13.28□□□□□ -0.28
UPK3B-205ENST00000490360 PSCAO43653 123 aa13.28□□□□□ -0.28
UPK3B-205ENST00000490360 SSSCA1O60232 199 aa13.28□□□□□ -0.28
UPK3B-205ENST00000490360 OR4E1P0C645 316 aa13.28□□□□□ -0.28
UPK3B-205ENST00000490360 METTL15P1P0C7V9 234 aa13.28□□□□□ -0.28
UPK3B-205ENST00000490360 UBE2MP61081 183 aaKnown RBP13.28□□□□□ -0.28
UPK3B-205ENST00000490360 FHL2Q14192 279 aa13.28□□□□□ -0.28
UPK3B-205ENST00000490360 OPCMLQ14982 345 aa13.28□□□□□ -0.28
UPK3B-205ENST00000490360 PCNPQ8WW12 178 aaKnown RBP13.28□□□□□ -0.28
UPK3B-205ENST00000490360 TMEM37Q8WXS4 190 aa13.28□□□□□ -0.28
UPK3B-205ENST00000490360 C8orf49Q96NF6 230 aa13.28□□□□□ -0.28
UPK3B-205ENST00000490360 IGHV3-53P01767 116 aa13.27□□□□□ -0.29
UPK3B-205ENST00000490360 CRYGDP07320 174 aa13.27□□□□□ -0.29
UPK3B-205ENST00000490360 TAS2R30P59541 319 aa13.27□□□□□ -0.29
UPK3B-205ENST00000490360 HAMPP81172 84 aa13.27□□□□□ -0.29
UPK3B-205ENST00000490360 WFDC10BQ8IUB3 73 aa13.27□□□□□ -0.29
UPK3B-205ENST00000490360 IQCF2Q8IXL9 164 aa13.27□□□□□ -0.29
UPK3B-205ENST00000490360 DEFB104AQ8WTQ1 72 aa13.27□□□□□ -0.29
UPK3B-205ENST00000490360 SOSTQ9BQB4 213 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms