RNA–Protein interactions for RNA: ENST00000490359.2

LRCH4-208, Transcript of leucine rich repeats and calponin homology domain containing 4, human

TSL 2

Gene LRCH4, Length 540 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRCH4-208	ENST00000490359	TRAV12-2	A0A075B6T6	113 aa		12.04	□□□□□ -0.48
LRCH4-208	ENST00000490359	PRAC2	D3DTV9	90 aa		12.04	□□□□□ -0.48
LRCH4-208	ENST00000490359	CRX	O43186	299 aa	Predicted RBP	12.04	□□□□□ -0.48
LRCH4-208	ENST00000490359	ZNF253	O75346	499 aa		12.04	□□□□□ -0.48
LRCH4-208	ENST00000490359	RRN3P1	Q2M238	152 aa		12.04	□□□□□ -0.48
LRCH4-208	ENST00000490359	FFAR4	Q5NUL3	377 aa		12.04	□□□□□ -0.48
LRCH4-208	ENST00000490359	ZNF767P	Q75MW2	155 aa		12.04	□□□□□ -0.48
LRCH4-208	ENST00000490359	BLNK	Q8WV28	456 aa		12.04	□□□□□ -0.48
LRCH4-208	ENST00000490359	MRPL32	Q9BYC8	188 aa	Known RBP	12.04	□□□□□ -0.48
LRCH4-208	ENST00000490359	WFDC1	Q9HC57	220 aa		12.04	□□□□□ -0.48
LRCH4-208	ENST00000490359	TEX48	A0A1B0GUV7	120 aa		12.03	□□□□□ -0.48
LRCH4-208	ENST00000490359	LOC102723971	A0A1B0GUV8	181 aa		12.03	□□□□□ -0.48
LRCH4-208	ENST00000490359	C12orf74	Q32Q52	190 aa		12.03	□□□□□ -0.48
LRCH4-208	ENST00000490359	FAM167A-AS1	Q96KT0	104 aa		12.03	□□□□□ -0.48
LRCH4-208	ENST00000490359	FUT9	Q9Y231	359 aa		12.03	□□□□□ -0.48
LRCH4-208	ENST00000490359	LYST	Q99698	3801 aa		12.03	□□□□□ -0.48
LRCH4-208	ENST00000490359	ALMS1	Q8TCU4	4167 aa		12.03	□□□□□ -0.48
LRCH4-208	ENST00000490359	NDUFB4	O95168	129 aa		12.02	□□□□□ -0.49
LRCH4-208	ENST00000490359	GIP	P09681	153 aa	Predicted RBP	12.02	□□□□□ -0.49
LRCH4-208	ENST00000490359	SPART-AS1	P0CW21	52 aa		12.02	□□□□□ -0.49
LRCH4-208	ENST00000490359	PDE6H	Q13956	83 aa		12.02	□□□□□ -0.49
LRCH4-208	ENST00000490359	PAXX	Q9BUH6	204 aa		12.02	□□□□□ -0.49
LRCH4-208	ENST00000490359	PARD6G	Q9BYG4	376 aa	Predicted RBP	12.02	□□□□□ -0.49
LRCH4-208	ENST00000490359	OR51M1	Q9H341	326 aa		12.02	□□□□□ -0.49
LRCH4-208	ENST00000490359	ZNF705G	A8MUZ8	300 aa	Predicted RBP	12.01	□□□□□ -0.49
LRCH4-208	ENST00000490359		M0R3E3	92 aa		12.01	□□□□□ -0.49
LRCH4-208	ENST00000490359	CDKN1B	P46527	198 aa		12.01	□□□□□ -0.49
LRCH4-208	ENST00000490359	RPP25L	Q8N5L8	163 aa	Known RBP	12.01	□□□□□ -0.49
LRCH4-208	ENST00000490359	ASB13	Q8WXK3	278 aa		12.01	□□□□□ -0.49
LRCH4-208	ENST00000490359	MRPL53	Q96EL3	112 aa	Known RBP	12.01	□□□□□ -0.49
LRCH4-208	ENST00000490359	PRELID1	Q9Y255	219 aa		12.01	□□□□□ -0.49
LRCH4-208	ENST00000490359	OR7C2	O60412	319 aa		12	□□□□□ -0.49
LRCH4-208	ENST00000490359	OR10J4	P0C629	311 aa		12	□□□□□ -0.49
LRCH4-208	ENST00000490359	NBEAP1	P0C6P0	100 aa		12	□□□□□ -0.49
LRCH4-208	ENST00000490359		P0DMU3	169 aa		12	□□□□□ -0.49
LRCH4-208	ENST00000490359	FAM231A	P0DMU4	169 aa		12	□□□□□ -0.49
LRCH4-208	ENST00000490359	FAM231C	P0DMU5	169 aa		12	□□□□□ -0.49
LRCH4-208	ENST00000490359	TSPO	P30536	169 aa		12	□□□□□ -0.49
LRCH4-208	ENST00000490359		Q5BKY6	102 aa		12	□□□□□ -0.49
LRCH4-208	ENST00000490359	FAM222A	Q5U5X8	452 aa		12	□□□□□ -0.49
LRCH4-208	ENST00000490359	LINC01587	Q99440	93 aa		12	□□□□□ -0.49
LRCH4-208	ENST00000490359	NDUFAF3	Q9BU61	184 aa		12	□□□□□ -0.49
LRCH4-208	ENST00000490359	AAMDC	Q9H7C9	122 aa		12	□□□□□ -0.49
LRCH4-208	ENST00000490359	DKK2	Q9UBU2	259 aa		12	□□□□□ -0.49
LRCH4-208	ENST00000490359	YTHDF2	Q9Y5A9	579 aa	Known RBP	12	□□□□□ -0.49
LRCH4-208	ENST00000490359	DEFB131B	A0A096LNP1	70 aa		11.99	□□□□□ -0.49
LRCH4-208	ENST00000490359	NPIPB6	E9PJ23	425 aa		11.99	□□□□□ -0.49
LRCH4-208	ENST00000490359	PRM2	P04554	102 aa		11.99	□□□□□ -0.49
LRCH4-208	ENST00000490359	OXA1L	Q15070	435 aa		11.99	□□□□□ -0.49
LRCH4-208	ENST00000490359	TMEM256	Q8N2U0	113 aa		11.99	□□□□□ -0.49
LRCH4-208	ENST00000490359	EXOC3-AS1	Q8N2X6	119 aa		11.99	□□□□□ -0.49
LRCH4-208	ENST00000490359	RNF141	Q8WVD5	230 aa		11.99	□□□□□ -0.49
LRCH4-208	ENST00000490359	FXYD5	Q96DB9	178 aa		11.99	□□□□□ -0.49
LRCH4-208	ENST00000490359	AQP10	Q96PS8	301 aa		11.99	□□□□□ -0.49
LRCH4-208	ENST00000490359	PLEC	Q15149	4684 aa	Known RBP	11.99	□□□□□ -0.49
LRCH4-208	ENST00000490359	DNAH1	Q9P2D7	4330 aa		11.98	□□□□□ -0.49
LRCH4-208	ENST00000490359	CT45A10	P0DMU9	189 aa		11.98	□□□□□ -0.49
LRCH4-208	ENST00000490359	LEP	P41159	167 aa		11.98	□□□□□ -0.49
LRCH4-208	ENST00000490359	TAS2R45	P59539	299 aa		11.98	□□□□□ -0.49
LRCH4-208	ENST00000490359	ZNF266	Q14584	549 aa		11.98	□□□□□ -0.49
LRCH4-208	ENST00000490359	ICAM4	Q14773	271 aa		11.98	□□□□□ -0.49
LRCH4-208	ENST00000490359	ACOT6	Q3I5F7	207 aa	Predicted RBP	11.98	□□□□□ -0.49
LRCH4-208	ENST00000490359	NIPSNAP3B	Q9BS92	247 aa		11.98	□□□□□ -0.49
LRCH4-208	ENST00000490359	TAS2R60	P59551	318 aa		11.97	□□□□□ -0.49
LRCH4-208	ENST00000490359	UBE2L3	P68036	154 aa	Known RBP	11.97	□□□□□ -0.49
LRCH4-208	ENST00000490359	ERCC8	Q13216	396 aa		11.97	□□□□□ -0.49
LRCH4-208	ENST00000490359	KIR3DS1	Q14943	382 aa		11.97	□□□□□ -0.49
LRCH4-208	ENST00000490359	KHDC3L	Q587J8	217 aa		11.97	□□□□□ -0.49
LRCH4-208	ENST00000490359	FAM122C	Q6P4D5	195 aa		11.97	□□□□□ -0.49
LRCH4-208	ENST00000490359	PHYHIPL	Q96FC7	376 aa		11.97	□□□□□ -0.49
LRCH4-208	ENST00000490359	ODF3	Q96PU9	254 aa		11.97	□□□□□ -0.49
LRCH4-208	ENST00000490359	PLA2G2E	Q9NZK7	142 aa		11.97	□□□□□ -0.49
LRCH4-208	ENST00000490359	IGHV4-4	A0A075B6R2	117 aa		11.96	□□□□□ -0.49
LRCH4-208	ENST00000490359	FXYD6-FXYD2	A0A087WZ82	144 aa		11.96	□□□□□ -0.49
LRCH4-208	ENST00000490359		J3KRW8	73 aa		11.96	□□□□□ -0.49
LRCH4-208	ENST00000490359	HTN1	P15515	57 aa		11.96	□□□□□ -0.49
LRCH4-208	ENST00000490359	AZU1	P20160	251 aa		11.96	□□□□□ -0.49
LRCH4-208	ENST00000490359	M6PR	P20645	277 aa		11.96	□□□□□ -0.49
LRCH4-208	ENST00000490359	RAB2A	P61019	212 aa		11.96	□□□□□ -0.49
LRCH4-208	ENST00000490359	GFI1B	Q5VTD9	330 aa		11.96	□□□□□ -0.49
LRCH4-208	ENST00000490359	UBE2DNL	Q8IWF7	75 aa		11.96	□□□□□ -0.49
LRCH4-208	ENST00000490359	HSD17B11	Q8NBQ5	300 aa		11.96	□□□□□ -0.49
LRCH4-208	ENST00000490359	INO80E	Q8NBZ0	244 aa	Predicted RBP	11.96	□□□□□ -0.49
LRCH4-208	ENST00000490359	OR2T35	Q8NGX2	323 aa		11.96	□□□□□ -0.49
LRCH4-208	ENST00000490359	ZNF503	Q96F45	646 aa		11.96	□□□□□ -0.49
LRCH4-208	ENST00000490359	FAM210B	Q96KR6	192 aa		11.96	□□□□□ -0.49
LRCH4-208	ENST00000490359	C20orf144	Q9BQM9	153 aa		11.96	□□□□□ -0.49
LRCH4-208	ENST00000490359	APLN	Q9ULZ1	77 aa		11.96	□□□□□ -0.49
LRCH4-208	ENST00000490359	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.95	□□□□□ -0.5
LRCH4-208	ENST00000490359	EIF3G	O75821	320 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
LRCH4-208	ENST00000490359	IGKV2D-40	P01614	121 aa	Predicted RBP	11.95	□□□□□ -0.5
LRCH4-208	ENST00000490359	DAD1	P61803	113 aa		11.95	□□□□□ -0.5
LRCH4-208	ENST00000490359	LINC00336	Q6ZUF6	198 aa		11.95	□□□□□ -0.5
LRCH4-208	ENST00000490359	LINC00477	Q96M19	166 aa		11.95	□□□□□ -0.5
LRCH4-208	ENST00000490359		A0A1W2PPV4	95 aa		11.94	□□□□□ -0.5
LRCH4-208	ENST00000490359		H7BYZ3	331 aa		11.94	□□□□□ -0.5
LRCH4-208	ENST00000490359	RAN	P62826	216 aa	Known RBP	11.94	□□□□□ -0.5
LRCH4-208	ENST00000490359	SOHLH1	Q5JUK2	328 aa		11.94	□□□□□ -0.5
LRCH4-208	ENST00000490359	AGPAT4-IT1	Q9H0P7	198 aa		11.94	□□□□□ -0.5
LRCH4-208	ENST00000490359	EPPK1	P58107	5090 aa	Known RBP	11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms