RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 ANXA7P20073 488 aaKnown RBP5.03□□□□□ -1.6
COL9A1-209ENST00000489861 ATP5G3P48201 142 aa5.03□□□□□ -1.6
COL9A1-209ENST00000489861 BCAP31P51572 246 aa5.03□□□□□ -1.6
COL9A1-209ENST00000489861 RHOBP62745 196 aa5.03□□□□□ -1.6
COL9A1-209ENST00000489861 CLINT1Q14677 625 aa5.03□□□□□ -1.6
COL9A1-209ENST00000489861 TMEM14EPQ6UXP3 125 aa5.03□□□□□ -1.6
COL9A1-209ENST00000489861 ZNF493Q6ZR52 646 aa5.03□□□□□ -1.6
COL9A1-209ENST00000489861 C12orf45Q8N5I9 185 aaPredicted RBP5.03□□□□□ -1.6
COL9A1-209ENST00000489861 ZNF738Q8NE65 137 aa5.03□□□□□ -1.6
COL9A1-209ENST00000489861 OR1L4Q8NGR5 311 aa5.03□□□□□ -1.6
COL9A1-209ENST00000489861 C16orf74Q96GX8 76 aa5.03□□□□□ -1.6
COL9A1-209ENST00000489861 SHANK2-AS3Q9BTD1 123 aa5.03□□□□□ -1.6
COL9A1-209ENST00000489861 RSG1Q9BU20 258 aa5.03□□□□□ -1.6
COL9A1-209ENST00000489861 SLC25A39Q9BZJ4 359 aaPredicted RBP5.03□□□□□ -1.6
COL9A1-209ENST00000489861 WDR12Q9GZL7 423 aaKnown RBP5.03□□□□□ -1.6
COL9A1-209ENST00000489861 SLC25A32Q9H2D1 315 aa5.03□□□□□ -1.6
COL9A1-209ENST00000489861 Q9H3A6 140 aa5.03□□□□□ -1.6
COL9A1-209ENST00000489861 Q9H8V8 135 aa5.03□□□□□ -1.6
COL9A1-209ENST00000489861 GPN1Q9HCN4 374 aaPredicted RBP5.03□□□□□ -1.6
COL9A1-209ENST00000489861 IGKV1OR2-108A0A075B7D4 117 aa5.02□□□□□ -1.61
COL9A1-209ENST00000489861 A0A087X0K7 114 aa5.02□□□□□ -1.61
COL9A1-209ENST00000489861 FAM240BA0A1B0GVZ2 78 aa5.02□□□□□ -1.61
COL9A1-209ENST00000489861 A0A1W2PPQ1 181 aa5.02□□□□□ -1.61
COL9A1-209ENST00000489861 FAM25EA8MYX2 175 aa5.02□□□□□ -1.61
COL9A1-209ENST00000489861 H3BRN7 92 aa5.02□□□□□ -1.61
COL9A1-209ENST00000489861 RLN2P04090 185 aa5.02□□□□□ -1.61
COL9A1-209ENST00000489861 TCRBP04435 133 aa5.02□□□□□ -1.61
COL9A1-209ENST00000489861 METTL15P1P0C7V9 234 aa5.02□□□□□ -1.61
COL9A1-209ENST00000489861 GCSHP23434 173 aa5.02□□□□□ -1.61
COL9A1-209ENST00000489861 S100A11P31949 105 aa5.02□□□□□ -1.61
COL9A1-209ENST00000489861 FXYD7P58549 80 aa5.02□□□□□ -1.61
COL9A1-209ENST00000489861 TAS2R60P59551 318 aa5.02□□□□□ -1.61
COL9A1-209ENST00000489861 KRTAP10-4P60372 401 aaPredicted RBP5.02□□□□□ -1.61
COL9A1-209ENST00000489861 FGL1Q08830 312 aa5.02□□□□□ -1.61
COL9A1-209ENST00000489861 GUK1Q16774 197 aa5.02□□□□□ -1.61
COL9A1-209ENST00000489861 ATP6V1FQ16864 119 aa5.02□□□□□ -1.61
COL9A1-209ENST00000489861 LCN15Q6UWW0 184 aa5.02□□□□□ -1.61
COL9A1-209ENST00000489861 STX12Q86Y82 276 aa5.02□□□□□ -1.61
COL9A1-209ENST00000489861 BPIFA4PQ86YQ2 179 aa5.02□□□□□ -1.61
COL9A1-209ENST00000489861 ZNF709Q8N972 641 aa5.02□□□□□ -1.61
COL9A1-209ENST00000489861 ZNF431Q8TF32 576 aaPredicted RBP5.02□□□□□ -1.61
COL9A1-209ENST00000489861 C2orf50Q96LR7 162 aa5.02□□□□□ -1.61
COL9A1-209ENST00000489861 PFDN5Q99471 154 aa5.02□□□□□ -1.61
COL9A1-209ENST00000489861 ARL6Q9H0F7 186 aa5.02□□□□□ -1.61
COL9A1-209ENST00000489861 SLC35B3Q9H1N7 401 aa5.02□□□□□ -1.61
COL9A1-209ENST00000489861 FAM30AQ9NZY2 134 aa5.02□□□□□ -1.61
COL9A1-209ENST00000489861 FLVCR2Q9UPI3 526 aa5.02□□□□□ -1.61
COL9A1-209ENST00000489861 TIMM8BQ9Y5J9 83 aaPredicted RBP5.02□□□□□ -1.61
COL9A1-209ENST00000489861 PXMP4Q9Y6I8 212 aa5.02□□□□□ -1.61
COL9A1-209ENST00000489861 CBY3A6NI87 242 aa5.01□□□□□ -1.61
COL9A1-209ENST00000489861 SNURFLB1AK76 121 aa5.01□□□□□ -1.61
COL9A1-209ENST00000489861 COX7A2P2O60397 106 aa5.01□□□□□ -1.61
COL9A1-209ENST00000489861 MPDU1O75352 247 aa5.01□□□□□ -1.61
COL9A1-209ENST00000489861 H2AFB2P0C5Z0 115 aa5.01□□□□□ -1.61
COL9A1-209ENST00000489861 CDKN1BP46527 198 aa5.01□□□□□ -1.61
COL9A1-209ENST00000489861 CAV2P51636 162 aa5.01□□□□□ -1.61
COL9A1-209ENST00000489861 CNN1P51911 297 aaKnown RBP5.01□□□□□ -1.61
COL9A1-209ENST00000489861 LINC00315P59091 139 aa5.01□□□□□ -1.61
COL9A1-209ENST00000489861 RRAS2P62070 204 aaPredicted RBP5.01□□□□□ -1.61
COL9A1-209ENST00000489861 CYCSP99999 105 aaKnown RBP5.01□□□□□ -1.61
COL9A1-209ENST00000489861 GDF5OSQ5U4N7 250 aa5.01□□□□□ -1.61
COL9A1-209ENST00000489861 C10orf113Q5VZT2 155 aa5.01□□□□□ -1.61
COL9A1-209ENST00000489861 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.01□□□□□ -1.61
COL9A1-209ENST00000489861 OR11H7Q8NGC8 314 aa5.01□□□□□ -1.61
COL9A1-209ENST00000489861 ARV1Q9H2C2 271 aa5.01□□□□□ -1.61
COL9A1-209ENST00000489861 KCNIP2Q9NS61 270 aa5.01□□□□□ -1.61
COL9A1-209ENST00000489861 NUDT15Q9NV35 164 aa5.01□□□□□ -1.61
COL9A1-209ENST00000489861 UQCC1Q9NVA1 299 aa5.01□□□□□ -1.61
COL9A1-209ENST00000489861 ZNF586Q9NXT0 402 aa5.01□□□□□ -1.61
COL9A1-209ENST00000489861 TRAV6A0A075B6T7 132 aa5□□□□□ -1.61
COL9A1-209ENST00000489861 C7orf66A4D0T2 115 aa5□□□□□ -1.61
COL9A1-209ENST00000489861 PMS2P5A8MQ11 134 aa5□□□□□ -1.61
COL9A1-209ENST00000489861 F5H768 121 aa5□□□□□ -1.61
COL9A1-209ENST00000489861 H7BYZ3 331 aa5□□□□□ -1.61
COL9A1-209ENST00000489861 AGPAT2O15120 278 aa5□□□□□ -1.61
COL9A1-209ENST00000489861 PRAF2O60831 178 aa5□□□□□ -1.61
COL9A1-209ENST00000489861 NUDT3O95989 172 aa5□□□□□ -1.61
COL9A1-209ENST00000489861 MBPP02686 304 aaPredicted RBP5□□□□□ -1.61
COL9A1-209ENST00000489861 PET100P0DJ07 73 aa5□□□□□ -1.61
COL9A1-209ENST00000489861 MT1HL1P0DM35 61 aa5□□□□□ -1.61
COL9A1-209ENST00000489861 CAMLGP49069 296 aa5□□□□□ -1.61
COL9A1-209ENST00000489861 SULT1A1P50225 295 aa5□□□□□ -1.61
COL9A1-209ENST00000489861 HIST1H1AQ02539 215 aaPredicted RBP5□□□□□ -1.61
COL9A1-209ENST00000489861 SLC38A11Q08AI6 406 aa5□□□□□ -1.61
COL9A1-209ENST00000489861 PSG3Q16557 428 aa5□□□□□ -1.61
COL9A1-209ENST00000489861 SPINK13Q1W4C9 94 aa5□□□□□ -1.61
COL9A1-209ENST00000489861 LELP1Q5T871 98 aa5□□□□□ -1.61
COL9A1-209ENST00000489861 SSX7Q7RTT5 188 aa5□□□□□ -1.61
COL9A1-209ENST00000489861 LINC00305Q7Z4B0 112 aa5□□□□□ -1.61
COL9A1-209ENST00000489861 C1orf158Q8N1D5 194 aa5□□□□□ -1.61
COL9A1-209ENST00000489861 OR8A1Q8NGG7 326 aa5□□□□□ -1.61
COL9A1-209ENST00000489861 ENKURQ8TC29 256 aa5□□□□□ -1.61
COL9A1-209ENST00000489861 TMEM263Q8WUH6 116 aaKnown RBP5□□□□□ -1.61
COL9A1-209ENST00000489861 LINC01587Q99440 93 aa5□□□□□ -1.61
COL9A1-209ENST00000489861 SDHCQ99643 169 aaPredicted RBP5□□□□□ -1.61
COL9A1-209ENST00000489861 TMEM70Q9BUB7 260 aa5□□□□□ -1.61
COL9A1-209ENST00000489861 SLC25A31Q9H0C2 315 aa5□□□□□ -1.61
COL9A1-209ENST00000489861 DNAJC4Q9NNZ3 241 aa5□□□□□ -1.61
COL9A1-209ENST00000489861 RCL1Q9Y2P8 373 aaKnown RBP5□□□□□ -1.61
COL9A1-209ENST00000489861 LSM5Q9Y4Y9 91 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms