RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 OR51M1Q9H341 326 aa9.65□□□□□ -0.86
CCL28-202ENST00000489442 AAMDCQ9H7C9 122 aa9.65□□□□□ -0.86
CCL28-202ENST00000489442 FUT9Q9Y231 359 aa9.65□□□□□ -0.86
CCL28-202ENST00000489442 TRAV12-2A0A075B6T6 113 aa9.64□□□□□ -0.87
CCL28-202ENST00000489442 C11orf94C9JXX5 98 aa9.64□□□□□ -0.87
CCL28-202ENST00000489442 OR7C2O60412 319 aa9.64□□□□□ -0.87
CCL28-202ENST00000489442 PDE6HQ13956 83 aa9.64□□□□□ -0.87
CCL28-202ENST00000489442 OXA1LQ15070 435 aa9.64□□□□□ -0.87
CCL28-202ENST00000489442 BAP18Q8IXM2 172 aa9.64□□□□□ -0.87
CCL28-202ENST00000489442 C1orf158Q8N1D5 194 aa9.64□□□□□ -0.87
CCL28-202ENST00000489442 PAXXQ9BUH6 204 aa9.64□□□□□ -0.87
CCL28-202ENST00000489442 SLC25A2Q9BXI2 301 aa9.64□□□□□ -0.87
CCL28-202ENST00000489442 PARD6GQ9BYG4 376 aaPredicted RBP9.64□□□□□ -0.87
CCL28-202ENST00000489442 WFDC1Q9HC57 220 aa9.64□□□□□ -0.87
CCL28-202ENST00000489442 PRAC2D3DTV9 90 aa9.63□□□□□ -0.87
CCL28-202ENST00000489442 OR10J4P0C629 311 aa9.63□□□□□ -0.87
CCL28-202ENST00000489442 NBEAP1P0C6P0 100 aa9.63□□□□□ -0.87
CCL28-202ENST00000489442 SPART-AS1P0CW21 52 aa9.63□□□□□ -0.87
CCL28-202ENST00000489442 TSPOP30536 169 aa9.63□□□□□ -0.87
CCL28-202ENST00000489442 CDKN1BP46527 198 aa9.63□□□□□ -0.87
CCL28-202ENST00000489442 TAS2R45P59539 299 aa9.63□□□□□ -0.87
CCL28-202ENST00000489442 ZNF266Q14584 549 aa9.63□□□□□ -0.87
CCL28-202ENST00000489442 ACOT6Q3I5F7 207 aaPredicted RBP9.63□□□□□ -0.87
CCL28-202ENST00000489442 OR2T35Q8NGX2 323 aa9.63□□□□□ -0.87
CCL28-202ENST00000489442 C2CD4CQ8TF44 421 aa9.63□□□□□ -0.87
CCL28-202ENST00000489442 FAM167A-AS1Q96KT0 104 aa9.63□□□□□ -0.87
CCL28-202ENST00000489442 PRELID1Q9Y255 219 aa9.63□□□□□ -0.87
CCL28-202ENST00000489442 PLECQ15149 4684 aaKnown RBP9.63□□□□□ -0.87
CCL28-202ENST00000489442 FXYD6-FXYD2A0A087WZ82 144 aa9.62□□□□□ -0.87
CCL28-202ENST00000489442 LOC102723971A0A1B0GUV8 181 aa9.62□□□□□ -0.87
CCL28-202ENST00000489442 A0A1W2PPV4 95 aa9.62□□□□□ -0.87
CCL28-202ENST00000489442 CRXO43186 299 aaPredicted RBP9.62□□□□□ -0.87
CCL28-202ENST00000489442 NDUFB4O95168 129 aa9.62□□□□□ -0.87
CCL28-202ENST00000489442 ICAM4Q14773 271 aa9.62□□□□□ -0.87
CCL28-202ENST00000489442 KHDC3LQ587J8 217 aa9.62□□□□□ -0.87
CCL28-202ENST00000489442 Q5BKY6 102 aa9.62□□□□□ -0.87
CCL28-202ENST00000489442 Q6ZTC4 211 aa9.62□□□□□ -0.87
CCL28-202ENST00000489442 EXOC3-AS1Q8N2X6 119 aa9.62□□□□□ -0.87
CCL28-202ENST00000489442 RPP25LQ8N5L8 163 aaKnown RBP9.62□□□□□ -0.87
CCL28-202ENST00000489442 RNF141Q8WVD5 230 aa9.62□□□□□ -0.87
CCL28-202ENST00000489442 MRPL53Q96EL3 112 aaKnown RBP9.62□□□□□ -0.87
CCL28-202ENST00000489442 AQP10Q96PS8 301 aa9.62□□□□□ -0.87
CCL28-202ENST00000489442 LINC01587Q99440 93 aa9.62□□□□□ -0.87
CCL28-202ENST00000489442 CELA1Q9UNI1 258 aa9.62□□□□□ -0.87
CCL28-202ENST00000489442 TRAV10A0A0B4J240 114 aa9.61□□□□□ -0.87
CCL28-202ENST00000489442 TEX48A0A1B0GUV7 120 aa9.61□□□□□ -0.87
CCL28-202ENST00000489442 ZNF705GA8MUZ8 300 aaPredicted RBP9.61□□□□□ -0.87
CCL28-202ENST00000489442 M0R3E3 92 aa9.61□□□□□ -0.87
CCL28-202ENST00000489442 HTN1P15515 57 aa9.61□□□□□ -0.87
CCL28-202ENST00000489442 M6PRP20645 277 aa9.61□□□□□ -0.87
CCL28-202ENST00000489442 FAM122CQ6P4D5 195 aa9.61□□□□□ -0.87
CCL28-202ENST00000489442 ZNF767PQ75MW2 155 aa9.61□□□□□ -0.87
CCL28-202ENST00000489442 TMEM256Q8N2U0 113 aa9.61□□□□□ -0.87
CCL28-202ENST00000489442 HSD17B11Q8NBQ5 300 aa9.61□□□□□ -0.87
CCL28-202ENST00000489442 IGLL5B9A064 214 aa9.6□□□□□ -0.87
CCL28-202ENST00000489442 J3KRW8 73 aa9.6□□□□□ -0.87
CCL28-202ENST00000489442 LY6G6CO95867 125 aa9.6□□□□□ -0.87
CCL28-202ENST00000489442 LEPP41159 167 aa9.6□□□□□ -0.87
CCL28-202ENST00000489442 UBE2L3P68036 154 aaKnown RBP9.6□□□□□ -0.87
CCL28-202ENST00000489442 C12orf74Q32Q52 190 aa9.6□□□□□ -0.87
CCL28-202ENST00000489442 FAM222AQ5U5X8 452 aa9.6□□□□□ -0.87
CCL28-202ENST00000489442 FXYD5Q96DB9 178 aa9.6□□□□□ -0.87
CCL28-202ENST00000489442 SACSQ9NZJ4 4579 aa9.6□□□□□ -0.87
CCL28-202ENST00000489442 BORCS7-ASMTA0A0B4J1R7 106 aa9.59□□□□□ -0.87
CCL28-202ENST00000489442 NPIPB6E9PJ23 425 aa9.59□□□□□ -0.87
CCL28-202ENST00000489442 CSN1S1P47710 185 aa9.59□□□□□ -0.87
CCL28-202ENST00000489442 RANP62826 216 aaKnown RBP9.59□□□□□ -0.87
CCL28-202ENST00000489442 OR10G4Q8NGN3 311 aa9.59□□□□□ -0.87
CCL28-202ENST00000489442 OR10G9Q8NGN4 311 aa9.59□□□□□ -0.87
CCL28-202ENST00000489442 OR10G7Q8NGN6 311 aa9.59□□□□□ -0.87
CCL28-202ENST00000489442 LINC00477Q96M19 166 aa9.59□□□□□ -0.87
CCL28-202ENST00000489442 DKK2Q9UBU2 259 aa9.59□□□□□ -0.87
CCL28-202ENST00000489442 YTHDF2Q9Y5A9 579 aaKnown RBP9.59□□□□□ -0.87
CCL28-202ENST00000489442 RYR2Q92736 4967 aa9.59□□□□□ -0.87
CCL28-202ENST00000489442 ALMS1Q8TCU4 4167 aa9.59□□□□□ -0.87
CCL28-202ENST00000489442 DEFB131BA0A096LNP1 70 aa9.58□□□□□ -0.88
CCL28-202ENST00000489442 PRM2P04554 102 aa9.58□□□□□ -0.88
CCL28-202ENST00000489442 CT45A10P0DMU9 189 aa9.58□□□□□ -0.88
CCL28-202ENST00000489442 TAS2R60P59551 318 aa9.58□□□□□ -0.88
CCL28-202ENST00000489442 RAB2AP61019 212 aa9.58□□□□□ -0.88
CCL28-202ENST00000489442 ERCC8Q13216 396 aa9.58□□□□□ -0.88
CCL28-202ENST00000489442 LINC00476Q8WZB0 136 aa9.58□□□□□ -0.88
CCL28-202ENST00000489442 PHYHIPLQ96FC7 376 aa9.58□□□□□ -0.88
CCL28-202ENST00000489442 NIPSNAP3BQ9BS92 247 aa9.58□□□□□ -0.88
CCL28-202ENST00000489442 TNFSF18Q9UNG2 199 aa9.58□□□□□ -0.88
CCL28-202ENST00000489442 H7BYZ3 331 aa9.57□□□□□ -0.88
CCL28-202ENST00000489442 EIF3GO75821 320 aaKnown RBP eCLIP9.57□□□□□ -0.88
CCL28-202ENST00000489442 MBP02144 154 aa9.57□□□□□ -0.88
CCL28-202ENST00000489442 ATP6V0CP27449 155 aa9.57□□□□□ -0.88
CCL28-202ENST00000489442 TCTAP57738 103 aa9.57□□□□□ -0.88
CCL28-202ENST00000489442 DAD1P61803 113 aa9.57□□□□□ -0.88
CCL28-202ENST00000489442 TMEM78Q5T7P6 136 aa9.57□□□□□ -0.88
CCL28-202ENST00000489442 GFI1BQ5VTD9 330 aa9.57□□□□□ -0.88
CCL28-202ENST00000489442 PQLC2Q6ZP29 291 aa9.57□□□□□ -0.88
CCL28-202ENST00000489442 LYPD1Q8N2G4 141 aa9.57□□□□□ -0.88
CCL28-202ENST00000489442 ZNF503Q96F45 646 aa9.57□□□□□ -0.88
CCL28-202ENST00000489442 ODF3Q96PU9 254 aa9.57□□□□□ -0.88
CCL28-202ENST00000489442 C20orf144Q9BQM9 153 aa9.57□□□□□ -0.88
CCL28-202ENST00000489442 PSMG3Q9BT73 122 aaPredicted RBP9.57□□□□□ -0.88
CCL28-202ENST00000489442 IGKV2-40A0A087WW87 121 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms