RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-230	ENST00000489430	ATP5S	Q99766	215 aa		13.59	□□□□□ -0.23
MRPL55-230	ENST00000489430	C20orf144	Q9BQM9	153 aa		13.59	□□□□□ -0.23
MRPL55-230	ENST00000489430	TRBV19	A0A075B6N1	114 aa		13.58	□□□□□ -0.24
MRPL55-230	ENST00000489430	FAM222A	Q5U5X8	452 aa		13.58	□□□□□ -0.24
MRPL55-230	ENST00000489430	ODF3	Q96PU9	254 aa		13.58	□□□□□ -0.24
MRPL55-230	ENST00000489430	NIPSNAP3B	Q9BS92	247 aa		13.58	□□□□□ -0.24
MRPL55-230	ENST00000489430	MRPL32	Q9BYC8	188 aa	Known RBP	13.58	□□□□□ -0.24
MRPL55-230	ENST00000489430	ZNF586	Q9NXT0	402 aa		13.58	□□□□□ -0.24
MRPL55-230	ENST00000489430	PRELID1	Q9Y255	219 aa		13.58	□□□□□ -0.24
MRPL55-230	ENST00000489430	HSPB11	Q9Y547	144 aa		13.58	□□□□□ -0.24
MRPL55-230	ENST00000489430	YTHDF2	Q9Y5A9	579 aa	Known RBP	13.58	□□□□□ -0.24
MRPL55-230	ENST00000489430	IGHV4-4	A0A075B6R2	117 aa		13.57	□□□□□ -0.24
MRPL55-230	ENST00000489430	RPL12	P30050	165 aa	Known RBP	13.57	□□□□□ -0.24
MRPL55-230	ENST00000489430	BAP18	Q8IXM2	172 aa		13.57	□□□□□ -0.24
MRPL55-230	ENST00000489430	SNRPC	P09234	159 aa	Known RBP	13.56	□□□□□ -0.24
MRPL55-230	ENST00000489430	TAS2R60	P59551	318 aa		13.56	□□□□□ -0.24
MRPL55-230	ENST00000489430	PARD6G	Q9BYG4	376 aa	Predicted RBP	13.56	□□□□□ -0.24
MRPL55-230	ENST00000489430	TRAV12-2	A0A075B6T6	113 aa		13.55	□□□□□ -0.24
MRPL55-230	ENST00000489430	LYRM9	A8MSI8	78 aa		13.55	□□□□□ -0.24
MRPL55-230	ENST00000489430		H3BTX0	84 aa		13.55	□□□□□ -0.24
MRPL55-230	ENST00000489430	IFNA5	P01569	189 aa		13.55	□□□□□ -0.24
MRPL55-230	ENST00000489430	GCSAML	Q5JQS6	135 aa		13.55	□□□□□ -0.24
MRPL55-230	ENST00000489430	ZNF767P	Q75MW2	155 aa		13.55	□□□□□ -0.24
MRPL55-230	ENST00000489430	RPP25L	Q8N5L8	163 aa	Known RBP	13.55	□□□□□ -0.24
MRPL55-230	ENST00000489430	NDUFAF3	Q9BU61	184 aa		13.55	□□□□□ -0.24
MRPL55-230	ENST00000489430	MBD2	Q9UBB5	411 aa		13.55	□□□□□ -0.24
MRPL55-230	ENST00000489430	TIMM9	Q9Y5J7	89 aa		13.55	□□□□□ -0.24
MRPL55-230	ENST00000489430	ALG5	Q9Y673	324 aa		13.55	□□□□□ -0.24
MRPL55-230	ENST00000489430	KMT2A	Q03164	3969 aa		13.55	□□□□□ -0.24
MRPL55-230	ENST00000489430	PRAC2	D3DTV9	90 aa		13.54	□□□□□ -0.24
MRPL55-230	ENST00000489430	NPIPB6	E9PJ23	425 aa		13.54	□□□□□ -0.24
MRPL55-230	ENST00000489430		H7BYZ3	331 aa		13.54	□□□□□ -0.24
MRPL55-230	ENST00000489430	ZNF493	Q6ZR52	646 aa		13.54	□□□□□ -0.24
MRPL55-230	ENST00000489430	SCGB1C1	Q8TD33	95 aa		13.54	□□□□□ -0.24
MRPL55-230	ENST00000489430	ASB13	Q8WXK3	278 aa		13.54	□□□□□ -0.24
MRPL55-230	ENST00000489430	FAM167A-AS1	Q96KT0	104 aa		13.54	□□□□□ -0.24
MRPL55-230	ENST00000489430	LINC01587	Q99440	93 aa		13.54	□□□□□ -0.24
MRPL55-230	ENST00000489430	SLC25A2	Q9BXI2	301 aa		13.54	□□□□□ -0.24
MRPL55-230	ENST00000489430	AAMDC	Q9H7C9	122 aa		13.54	□□□□□ -0.24
MRPL55-230	ENST00000489430	NDUFB4	O95168	129 aa		13.53	□□□□□ -0.24
MRPL55-230	ENST00000489430	OR51M1	Q9H341	326 aa		13.53	□□□□□ -0.24
MRPL55-230	ENST00000489430	FUT9	Q9Y231	359 aa		13.53	□□□□□ -0.24
MRPL55-230	ENST00000489430	ZNF705G	A8MUZ8	300 aa	Predicted RBP	13.52	□□□□□ -0.25
MRPL55-230	ENST00000489430	NBEAP1	P0C6P0	100 aa		13.52	□□□□□ -0.25
MRPL55-230	ENST00000489430	PYY	P10082	97 aa		13.52	□□□□□ -0.25
MRPL55-230	ENST00000489430	LEP	P41159	167 aa		13.52	□□□□□ -0.25
MRPL55-230	ENST00000489430	MIR17HG	Q75NE6	70 aa		13.52	□□□□□ -0.25
MRPL55-230	ENST00000489430	C16orf74	Q96GX8	76 aa		13.52	□□□□□ -0.25
MRPL55-230	ENST00000489430	LINC00477	Q96M19	166 aa		13.52	□□□□□ -0.25
MRPL55-230	ENST00000489430	DAD1	P61803	113 aa		13.51	□□□□□ -0.25
MRPL55-230	ENST00000489430	MED28	Q9H204	178 aa		13.51	□□□□□ -0.25
MRPL55-230	ENST00000489430	EPPK1	P58107	5090 aa	Known RBP	13.5	□□□□□ -0.25
MRPL55-230	ENST00000489430	PLAC8L1	A1L4L8	177 aa		13.5	□□□□□ -0.25
MRPL55-230	ENST00000489430		P0DMU3	169 aa		13.5	□□□□□ -0.25
MRPL55-230	ENST00000489430	FAM231A	P0DMU4	169 aa		13.5	□□□□□ -0.25
MRPL55-230	ENST00000489430	FAM231C	P0DMU5	169 aa		13.5	□□□□□ -0.25
MRPL55-230	ENST00000489430	CT45A10	P0DMU9	189 aa		13.5	□□□□□ -0.25
MRPL55-230	ENST00000489430	TAS2R45	P59539	299 aa		13.5	□□□□□ -0.25
MRPL55-230	ENST00000489430	LYPD1	Q8N2G4	141 aa		13.5	□□□□□ -0.25
MRPL55-230	ENST00000489430	TMEM263	Q8WUH6	116 aa	Known RBP	13.5	□□□□□ -0.25
MRPL55-230	ENST00000489430	PAXX	Q9BUH6	204 aa		13.5	□□□□□ -0.25
MRPL55-230	ENST00000489430		M0R3E3	92 aa		13.49	□□□□□ -0.25
MRPL55-230	ENST00000489430	NMB	P08949	121 aa		13.49	□□□□□ -0.25
MRPL55-230	ENST00000489430	FFAR4	Q5NUL3	377 aa		13.49	□□□□□ -0.25
MRPL55-230	ENST00000489430	GFI1B	Q5VTD9	330 aa		13.49	□□□□□ -0.25
MRPL55-230	ENST00000489430	C9orf47	Q6ZRZ4	202 aa		13.49	□□□□□ -0.25
MRPL55-230	ENST00000489430	RNASE8	Q8TDE3	154 aa	Known RBP	13.49	□□□□□ -0.25
MRPL55-230	ENST00000489430	BLNK	Q8WV28	456 aa		13.49	□□□□□ -0.25
MRPL55-230	ENST00000489430	RNF141	Q8WVD5	230 aa		13.49	□□□□□ -0.25
MRPL55-230	ENST00000489430	FXYD5	Q96DB9	178 aa		13.49	□□□□□ -0.25
MRPL55-230	ENST00000489430	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	13.49	□□□□□ -0.25
MRPL55-230	ENST00000489430	SLC25A5	P05141	298 aa	Known RBP	13.48	□□□□□ -0.25
MRPL55-230	ENST00000489430	AZU1	P20160	251 aa		13.48	□□□□□ -0.25
MRPL55-230	ENST00000489430	ZNF266	Q14584	549 aa		13.48	□□□□□ -0.25
MRPL55-230	ENST00000489430	CCDC28A	Q8IWP9	274 aa		13.48	□□□□□ -0.25
MRPL55-230	ENST00000489430	SMIM3	Q9BZL3	60 aa		13.48	□□□□□ -0.25
MRPL55-230	ENST00000489430	TRBV7-9	A0A0J9YWB2	115 aa		13.47	□□□□□ -0.25
MRPL55-230	ENST00000489430	PRM2	P04554	102 aa		13.47	□□□□□ -0.25
MRPL55-230	ENST00000489430	ICAM4	Q14773	271 aa		13.47	□□□□□ -0.25
MRPL55-230	ENST00000489430	FCN2	Q15485	313 aa		13.47	□□□□□ -0.25
MRPL55-230	ENST00000489430	KHDC3L	Q587J8	217 aa		13.47	□□□□□ -0.25
MRPL55-230	ENST00000489430	EXOC3-AS1	Q8N2X6	119 aa		13.47	□□□□□ -0.25
MRPL55-230	ENST00000489430	FAM19A4	Q96LR4	140 aa		13.47	□□□□□ -0.25
MRPL55-230	ENST00000489430	AQP10	Q96PS8	301 aa		13.47	□□□□□ -0.25
MRPL55-230	ENST00000489430	PYGO2	Q9BRQ0	406 aa		13.47	□□□□□ -0.25
MRPL55-230	ENST00000489430	VPS13D	Q5THJ4	4388 aa		13.47	□□□□□ -0.25
MRPL55-230	ENST00000489430	KLLN	B2CW77	178 aa		13.46	□□□□□ -0.25
MRPL55-230	ENST00000489430	OR7C2	O60412	319 aa		13.46	□□□□□ -0.25
MRPL55-230	ENST00000489430	GIP	P09681	153 aa	Predicted RBP	13.46	□□□□□ -0.25
MRPL55-230	ENST00000489430	PRB4	P10163	310 aa	Predicted RBP	13.46	□□□□□ -0.25
MRPL55-230	ENST00000489430	CRISP2	P16562	243 aa		13.46	□□□□□ -0.25
MRPL55-230	ENST00000489430	M6PR	P20645	277 aa		13.46	□□□□□ -0.25
MRPL55-230	ENST00000489430	WFDC1	Q9HC57	220 aa		13.46	□□□□□ -0.25
MRPL55-230	ENST00000489430	PLA2G2E	Q9NZK7	142 aa		13.46	□□□□□ -0.25
MRPL55-230	ENST00000489430	CBY3	A6NI87	242 aa		13.45	□□□□□ -0.26
MRPL55-230	ENST00000489430	OR10J4	P0C629	311 aa		13.45	□□□□□ -0.26
MRPL55-230	ENST00000489430	HTN1	P15515	57 aa		13.45	□□□□□ -0.26
MRPL55-230	ENST00000489430	KIR3DS1	Q14943	382 aa		13.45	□□□□□ -0.26
MRPL55-230	ENST00000489430	ACOT6	Q3I5F7	207 aa	Predicted RBP	13.45	□□□□□ -0.26
MRPL55-230	ENST00000489430	TMEM78	Q5T7P6	136 aa		13.45	□□□□□ -0.26

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