RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 AP3S1Q92572 193 aa10.86□□□□□ -0.67
USP48-210ENST00000489108 ST6GAL2Q96JF0 529 aa10.86□□□□□ -0.67
USP48-210ENST00000489108 C8orf49Q96NF6 230 aa10.86□□□□□ -0.67
USP48-210ENST00000489108 SCGB3A2Q96PL1 93 aa10.86□□□□□ -0.67
USP48-210ENST00000489108 ARL6Q9H0F7 186 aa10.86□□□□□ -0.67
USP48-210ENST00000489108 MIXL1Q9H2W2 232 aa10.86□□□□□ -0.67
USP48-210ENST00000489108 VCX3AQ9NNX9 186 aa10.86□□□□□ -0.67
USP48-210ENST00000489108 HHLA3Q9XRX5 114 aa10.86□□□□□ -0.67
USP48-210ENST00000489108 SLC17A3O00476 420 aa10.85□□□□□ -0.67
USP48-210ENST00000489108 SPINK4O60575 86 aa10.85□□□□□ -0.67
USP48-210ENST00000489108 MRPS10P82664 201 aaKnown RBP10.85□□□□□ -0.67
USP48-210ENST00000489108 TEPPQ6URK8 271 aa10.85□□□□□ -0.67
USP48-210ENST00000489108 S100A7AQ86SG5 101 aa10.85□□□□□ -0.67
USP48-210ENST00000489108 ZNF680Q8NEM1 530 aa10.85□□□□□ -0.67
USP48-210ENST00000489108 SMIM4Q8WVI0 70 aa10.85□□□□□ -0.67
USP48-210ENST00000489108 ARV1Q9H2C2 271 aa10.85□□□□□ -0.67
USP48-210ENST00000489108 STRAPQ9Y3F4 350 aaKnown RBP10.85□□□□□ -0.67
USP48-210ENST00000489108 DUXBA0A1W2PPF3 345 aa10.84□□□□□ -0.67
USP48-210ENST00000489108 PSCAO43653 123 aa10.84□□□□□ -0.67
USP48-210ENST00000489108 ATP6V1G2O95670 118 aa10.84□□□□□ -0.67
USP48-210ENST00000489108 CRYGDP07320 174 aa10.84□□□□□ -0.67
USP48-210ENST00000489108 SLC25A6P12236 298 aa10.84□□□□□ -0.67
USP48-210ENST00000489108 SELENOTP62341 195 aa10.84□□□□□ -0.67
USP48-210ENST00000489108 FHL2Q14192 279 aa10.84□□□□□ -0.67
USP48-210ENST00000489108 ODF3Q96PU9 254 aa10.84□□□□□ -0.67
USP48-210ENST00000489108 SCP2D1Q9UJQ7 156 aa10.84□□□□□ -0.67
USP48-210ENST00000489108 A0A087WXM4 84 aa10.83□□□□□ -0.68
USP48-210ENST00000489108 TCL1AP56279 114 aa10.83□□□□□ -0.68
USP48-210ENST00000489108 SLAQ13239 276 aa10.83□□□□□ -0.68
USP48-210ENST00000489108 Q8N814 137 aa10.83□□□□□ -0.68
USP48-210ENST00000489108 ANKRD20A5PA0PJZ0 165 aa10.82□□□□□ -0.68
USP48-210ENST00000489108 C7orf71A4D174 169 aa10.82□□□□□ -0.68
USP48-210ENST00000489108 E5RGE8 158 aa10.82□□□□□ -0.68
USP48-210ENST00000489108 C1QBP02746 253 aa10.82□□□□□ -0.68
USP48-210ENST00000489108 SLC25A5P05141 298 aaKnown RBP10.82□□□□□ -0.68
USP48-210ENST00000489108 ANXA2RQ3ZCQ2 193 aa10.82□□□□□ -0.68
USP48-210ENST00000489108 LINC00305Q7Z4B0 112 aa10.82□□□□□ -0.68
USP48-210ENST00000489108 EIF4E3Q8N5X7 224 aaKnown RBP10.82□□□□□ -0.68
USP48-210ENST00000489108 MRPL16Q9NX20 251 aaKnown RBP10.82□□□□□ -0.68
USP48-210ENST00000489108 RNF24Q9Y225 148 aa10.82□□□□□ -0.68
USP48-210ENST00000489108 FAT3Q8TDW7 4589 aa10.82□□□□□ -0.68
USP48-210ENST00000489108 PIGBOS1A0A0B4J2F0 54 aa10.81□□□□□ -0.68
USP48-210ENST00000489108 K7EQD1 137 aa10.81□□□□□ -0.68
USP48-210ENST00000489108 CTDSP2O14595 271 aa10.81□□□□□ -0.68
USP48-210ENST00000489108 RGS5O15539 181 aa10.81□□□□□ -0.68
USP48-210ENST00000489108 RRAS2P62070 204 aaPredicted RBP10.81□□□□□ -0.68
USP48-210ENST00000489108 CD300CQ08708 224 aa10.81□□□□□ -0.68
USP48-210ENST00000489108 BPIFA4PQ86YQ2 179 aa10.81□□□□□ -0.68
USP48-210ENST00000489108 SAT2Q96F10 170 aaPredicted RBP10.81□□□□□ -0.68
USP48-210ENST00000489108 MRPL32Q9BYC8 188 aaKnown RBP10.81□□□□□ -0.68
USP48-210ENST00000489108 NAA50Q9GZZ1 169 aaKnown RBP10.81□□□□□ -0.68
USP48-210ENST00000489108 MCUBQ9NWR8 336 aa10.81□□□□□ -0.68
USP48-210ENST00000489108 TP53TG3Q9ULZ0 132 aa10.81□□□□□ -0.68
USP48-210ENST00000489108 RABL2BQ9UNT1 228 aa10.81□□□□□ -0.68
USP48-210ENST00000489108 PXMP4Q9Y6I8 212 aa10.81□□□□□ -0.68
USP48-210ENST00000489108 H3BQ15 152 aa10.8□□□□□ -0.68
USP48-210ENST00000489108 CTDSPLO15194 276 aa10.8□□□□□ -0.68
USP48-210ENST00000489108 CCNKO75909 580 aa10.8□□□□□ -0.68
USP48-210ENST00000489108 SRIP30626 198 aa10.8□□□□□ -0.68
USP48-210ENST00000489108 BTN1A1Q13410 526 aa10.8□□□□□ -0.68
USP48-210ENST00000489108 MORN5Q5VZ52 161 aa10.8□□□□□ -0.68
USP48-210ENST00000489108 C10orf126Q8N4M7 172 aa10.8□□□□□ -0.68
USP48-210ENST00000489108 LRTM2Q8N967 370 aa10.8□□□□□ -0.68
USP48-210ENST00000489108 VGLL1Q99990 258 aa10.8□□□□□ -0.68
USP48-210ENST00000489108 OXTP01178 125 aa10.79□□□□□ -0.68
USP48-210ENST00000489108 HOXB5P09067 269 aa10.79□□□□□ -0.68
USP48-210ENST00000489108 IGLC2P0DOY2 106 aa10.79□□□□□ -0.68
USP48-210ENST00000489108 RNASE4P34096 147 aaKnown RBP10.79□□□□□ -0.68
USP48-210ENST00000489108 SLC38A11Q08AI6 406 aa10.79□□□□□ -0.68
USP48-210ENST00000489108 ERCC8Q13216 396 aa10.79□□□□□ -0.68
USP48-210ENST00000489108 IL18Q14116 193 aa10.79□□□□□ -0.68
USP48-210ENST00000489108 CTF1Q16619 201 aa10.79□□□□□ -0.68
USP48-210ENST00000489108 C4orf46Q504U0 113 aa10.79□□□□□ -0.68
USP48-210ENST00000489108 NPVFQ9HCQ7 196 aa10.79□□□□□ -0.68
USP48-210ENST00000489108 TRGV4A0A0C4DH28 118 aa10.78□□□□□ -0.68
USP48-210ENST00000489108 KLLNB2CW77 178 aa10.78□□□□□ -0.68
USP48-210ENST00000489108 K7EPK0 472 aa10.78□□□□□ -0.68
USP48-210ENST00000489108 MPDU1O75352 247 aa10.78□□□□□ -0.68
USP48-210ENST00000489108 GYPEP15421 78 aa10.78□□□□□ -0.68
USP48-210ENST00000489108 VAMP1P23763 118 aa10.78□□□□□ -0.68
USP48-210ENST00000489108 ZNF415Q09FC8 603 aa10.78□□□□□ -0.68
USP48-210ENST00000489108 TMEM128Q5BJH2 165 aa10.78□□□□□ -0.68
USP48-210ENST00000489108 IBA57Q5T440 356 aaKnown RBP10.78□□□□□ -0.68
USP48-210ENST00000489108 Q6ZSA8 131 aa10.78□□□□□ -0.68
USP48-210ENST00000489108 TMEM37Q8WXS4 190 aa10.78□□□□□ -0.68
USP48-210ENST00000489108 PSENENQ9NZ42 101 aa10.78□□□□□ -0.68
USP48-210ENST00000489108 RCL1Q9Y2P8 373 aaKnown RBP10.78□□□□□ -0.68
USP48-210ENST00000489108 GOSR2O14653 212 aa10.77□□□□□ -0.69
USP48-210ENST00000489108 POLR2GP62487 172 aaKnown RBP eCLIP10.77□□□□□ -0.69
USP48-210ENST00000489108 OPCMLQ14982 345 aa10.77□□□□□ -0.69
USP48-210ENST00000489108 PXDC1Q5TGL8 231 aa10.77□□□□□ -0.69
USP48-210ENST00000489108 Q6ZQT7 251 aa10.77□□□□□ -0.69
USP48-210ENST00000489108 SFTA3P0C7M3 94 aa10.76□□□□□ -0.69
USP48-210ENST00000489108 ID3Q02535 119 aa10.76□□□□□ -0.69
USP48-210ENST00000489108 PCNPQ8WW12 178 aaKnown RBP10.76□□□□□ -0.69
USP48-210ENST00000489108 DIRAS2Q96HU8 199 aa10.76□□□□□ -0.69
USP48-210ENST00000489108 FAM19A4Q96LR4 140 aa10.76□□□□□ -0.69
USP48-210ENST00000489108 Q9HAA7 133 aa10.76□□□□□ -0.69
USP48-210ENST00000489108 CCDC59Q9P031 241 aaKnown RBP10.76□□□□□ -0.69
USP48-210ENST00000489108 TRAV5A0A0B4J249 113 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 940.5 ms