RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 MFFQ9GZY8 342 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 ARL6Q9H0F7 186 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 BATF3Q9NR55 127 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 NUDT15Q9NV35 164 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 HIGD1AQ9Y241 93 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 DNAH2Q9P225 4427 aa4.21□□□□□ -1.74
CDHR3-213ENST00000488386 DNAH6Q9C0G6 4158 aa4.2□□□□□ -1.74
CDHR3-213ENST00000488386 DEFB131BA0A096LNP1 70 aa4.2□□□□□ -1.74
CDHR3-213ENST00000488386 TRAV10A0A0B4J240 114 aa4.2□□□□□ -1.74
CDHR3-213ENST00000488386 TRAV5A0A0B4J249 113 aa4.2□□□□□ -1.74
CDHR3-213ENST00000488386 C5orf51A6NDU8 294 aa4.2□□□□□ -1.74
CDHR3-213ENST00000488386 CBY3A6NI87 242 aa4.2□□□□□ -1.74
CDHR3-213ENST00000488386 ZNF705GA8MUZ8 300 aaPredicted RBP4.2□□□□□ -1.74
CDHR3-213ENST00000488386 ZNF705FA8MVS1 300 aaPredicted RBP4.2□□□□□ -1.74
CDHR3-213ENST00000488386 ISLRO14498 428 aa4.2□□□□□ -1.74
CDHR3-213ENST00000488386 HYPMO75409 117 aa4.2□□□□□ -1.74
CDHR3-213ENST00000488386 SIX6O95475 246 aa4.2□□□□□ -1.74
CDHR3-213ENST00000488386 NUP62P37198 522 aaPredicted RBP4.2□□□□□ -1.74
CDHR3-213ENST00000488386 CNN1P51911 297 aaKnown RBP4.2□□□□□ -1.74
CDHR3-213ENST00000488386 S100A10P60903 97 aa4.2□□□□□ -1.74
CDHR3-213ENST00000488386 NUTF2P61970 127 aaKnown RBP4.2□□□□□ -1.74
CDHR3-213ENST00000488386 DLK1P80370 383 aa4.2□□□□□ -1.74
CDHR3-213ENST00000488386 FCN2Q15485 313 aa4.2□□□□□ -1.74
CDHR3-213ENST00000488386 CNPY1Q3B7I2 92 aa4.2□□□□□ -1.74
CDHR3-213ENST00000488386 TMEM41BQ5BJD5 291 aa4.2□□□□□ -1.74
CDHR3-213ENST00000488386 C1orf194Q5T5A4 169 aa4.2□□□□□ -1.74
CDHR3-213ENST00000488386 FAM222AQ5U5X8 452 aa4.2□□□□□ -1.74
CDHR3-213ENST00000488386 MIC13Q5XKP0 118 aa4.2□□□□□ -1.74
CDHR3-213ENST00000488386 LGALS9CQ6DKI2 356 aa4.2□□□□□ -1.74
CDHR3-213ENST00000488386 EBLN2Q6P2I7 272 aa4.2□□□□□ -1.74
CDHR3-213ENST00000488386 AMTNQ6UX39 209 aa4.2□□□□□ -1.74
CDHR3-213ENST00000488386 ZNF705AQ6ZN79 300 aaPredicted RBP4.2□□□□□ -1.74
CDHR3-213ENST00000488386 ZNF738Q8NE65 137 aa4.2□□□□□ -1.74
CDHR3-213ENST00000488386 OR11H7Q8NGC8 314 aa4.2□□□□□ -1.74
CDHR3-213ENST00000488386 OR10P1Q8NGE3 313 aa4.2□□□□□ -1.74
CDHR3-213ENST00000488386 ZNF431Q8TF32 576 aaPredicted RBP4.2□□□□□ -1.74
CDHR3-213ENST00000488386 MGST2Q99735 147 aa4.2□□□□□ -1.74
CDHR3-213ENST00000488386 SHANK2-AS3Q9BTD1 123 aa4.2□□□□□ -1.74
CDHR3-213ENST00000488386 KRTAP9-8Q9BYQ0 159 aa4.2□□□□□ -1.74
CDHR3-213ENST00000488386 ARV1Q9H2C2 271 aa4.2□□□□□ -1.74
CDHR3-213ENST00000488386 PIGBOS1A0A0B4J2F0 54 aa4.19□□□□□ -1.74
CDHR3-213ENST00000488386 UBE2L5PA0A1B0GUS4 154 aa4.19□□□□□ -1.74
CDHR3-213ENST00000488386 IGSF23A1L1A6 192 aa4.19□□□□□ -1.74
CDHR3-213ENST00000488386 PRAC2D3DTV9 90 aa4.19□□□□□ -1.74
CDHR3-213ENST00000488386 J3KRW8 73 aa4.19□□□□□ -1.74
CDHR3-213ENST00000488386 L7N2F9 121 aa4.19□□□□□ -1.74
CDHR3-213ENST00000488386 M0R2N4 97 aa4.19□□□□□ -1.74
CDHR3-213ENST00000488386 SLC17A3O00476 420 aa4.19□□□□□ -1.74
CDHR3-213ENST00000488386 AGPAT2O15120 278 aa4.19□□□□□ -1.74
CDHR3-213ENST00000488386 MRPS12O15235 138 aaKnown RBP4.19□□□□□ -1.74
CDHR3-213ENST00000488386 CRXO43186 299 aaPredicted RBP4.19□□□□□ -1.74
CDHR3-213ENST00000488386 TSC22D2O75157 780 aa4.19□□□□□ -1.74
CDHR3-213ENST00000488386 HTN1P15515 57 aa4.19□□□□□ -1.74
CDHR3-213ENST00000488386 AZU1P20160 251 aa4.19□□□□□ -1.74
CDHR3-213ENST00000488386 CAV2P51636 162 aa4.19□□□□□ -1.74
CDHR3-213ENST00000488386 VAMP2P63027 116 aa4.19□□□□□ -1.74
CDHR3-213ENST00000488386 IFITM3Q01628 133 aa4.19□□□□□ -1.74
CDHR3-213ENST00000488386 HIST1H1AQ02539 215 aaPredicted RBP4.19□□□□□ -1.74
CDHR3-213ENST00000488386 ZNF846Q147U1 533 aa4.19□□□□□ -1.74
CDHR3-213ENST00000488386 LINC00305Q7Z4B0 112 aa4.19□□□□□ -1.74
CDHR3-213ENST00000488386 C12orf45Q8N5I9 185 aaPredicted RBP4.19□□□□□ -1.74
CDHR3-213ENST00000488386 TMEM37Q8WXS4 190 aa4.19□□□□□ -1.74
CDHR3-213ENST00000488386 C1QTNF4Q9BXJ3 329 aa4.19□□□□□ -1.74
CDHR3-213ENST00000488386 HRH4Q9H3N8 390 aa4.19□□□□□ -1.74
CDHR3-213ENST00000488386 C11orf1Q9H5F2 150 aa4.19□□□□□ -1.74
CDHR3-213ENST00000488386 NPVFQ9HCQ7 196 aa4.19□□□□□ -1.74
CDHR3-213ENST00000488386 RPRMQ9NS64 109 aa4.19□□□□□ -1.74
CDHR3-213ENST00000488386 YTHDF2Q9Y5A9 579 aaKnown RBP4.19□□□□□ -1.74
CDHR3-213ENST00000488386 IGLV2-18A0A075B6J9 118 aa4.18□□□□□ -1.74
CDHR3-213ENST00000488386 FAM240BA0A1B0GVZ2 78 aa4.18□□□□□ -1.74
CDHR3-213ENST00000488386 C11orf94C9JXX5 98 aa4.18□□□□□ -1.74
CDHR3-213ENST00000488386 GOSR2O14653 212 aa4.18□□□□□ -1.74
CDHR3-213ENST00000488386 COX7A2P2O60397 106 aa4.18□□□□□ -1.74
CDHR3-213ENST00000488386 CFDP00746 253 aaPredicted RBP4.18□□□□□ -1.74
CDHR3-213ENST00000488386 CXCL3P19876 107 aa4.18□□□□□ -1.74
CDHR3-213ENST00000488386 PLP1P60201 277 aa4.18□□□□□ -1.74
CDHR3-213ENST00000488386 RHOBP62745 196 aa4.18□□□□□ -1.74
CDHR3-213ENST00000488386 OPCMLQ14982 345 aa4.18□□□□□ -1.74
CDHR3-213ENST00000488386 LRRC37A5PQ49AS3 106 aa4.18□□□□□ -1.74
CDHR3-213ENST00000488386 GCSAMLQ5JQS6 135 aa4.18□□□□□ -1.74
CDHR3-213ENST00000488386 NRARPQ7Z6K4 114 aa4.18□□□□□ -1.74
CDHR3-213ENST00000488386 LRRC20Q8TCA0 184 aa4.18□□□□□ -1.74
CDHR3-213ENST00000488386 C2orf50Q96LR7 162 aa4.18□□□□□ -1.74
CDHR3-213ENST00000488386 TMEM208Q9BTX3 173 aa4.18□□□□□ -1.74
CDHR3-213ENST00000488386 GOLT1BQ9Y3E0 138 aa4.18□□□□□ -1.74
CDHR3-213ENST00000488386 RFNGQ9Y644 331 aa4.18□□□□□ -1.74
CDHR3-213ENST00000488386 DYNC1H1Q14204 4646 aaKnown RBP4.18□□□□□ -1.74
CDHR3-213ENST00000488386 FAT2Q9NYQ8 4349 aa4.17□□□□□ -1.74
CDHR3-213ENST00000488386 HERC2O95714 4834 aa4.17□□□□□ -1.74
CDHR3-213ENST00000488386 DNAH17Q9UFH2 4485 aa4.17□□□□□ -1.74
CDHR3-213ENST00000488386 A0A087X0K7 114 aa4.17□□□□□ -1.74
CDHR3-213ENST00000488386 A8MTW9 85 aa4.17□□□□□ -1.74
CDHR3-213ENST00000488386 H3BQ15 152 aa4.17□□□□□ -1.74
CDHR3-213ENST00000488386 EIF3GO75821 320 aaKnown RBP eCLIP4.17□□□□□ -1.74
CDHR3-213ENST00000488386 HBE1P02100 147 aa4.17□□□□□ -1.74
CDHR3-213ENST00000488386 SPART-AS1P0CW21 52 aa4.17□□□□□ -1.74
CDHR3-213ENST00000488386 RPL7P18124 248 aaKnown RBP4.17□□□□□ -1.74
CDHR3-213ENST00000488386 FGF7P21781 194 aa4.17□□□□□ -1.74
CDHR3-213ENST00000488386 CAMLGP49069 296 aa4.17□□□□□ -1.74
CDHR3-213ENST00000488386 MEOX2P50222 304 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms