RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 CSN1S1P47710 185 aa9.16□□□□□ -0.94
HLA-DOB-209ENST00000488325 RHEBQ15382 184 aa9.16□□□□□ -0.94
HLA-DOB-209ENST00000488325 SIGLEC15Q6ZMC9 328 aa9.16□□□□□ -0.94
HLA-DOB-209ENST00000488325 ARL6IP6Q8N6S5 226 aa9.16□□□□□ -0.94
HLA-DOB-209ENST00000488325 OR1N2Q8NGR9 330 aa9.16□□□□□ -0.94
HLA-DOB-209ENST00000488325 GLMPQ8WWB7 406 aa9.16□□□□□ -0.94
HLA-DOB-209ENST00000488325 B9D2Q9BPU9 175 aa9.16□□□□□ -0.94
HLA-DOB-209ENST00000488325 CLEC5AQ9NY25 188 aa9.16□□□□□ -0.94
HLA-DOB-209ENST00000488325 SMPXQ9UHP9 88 aa9.16□□□□□ -0.94
HLA-DOB-209ENST00000488325 PRELID1Q9Y255 219 aa9.16□□□□□ -0.94
HLA-DOB-209ENST00000488325 IGHV3OR16-13A0A075B7E8 117 aa9.15□□□□□ -0.94
HLA-DOB-209ENST00000488325 IGHV3-74A0A0B4J1X5 117 aa9.15□□□□□ -0.94
HLA-DOB-209ENST00000488325 IGHV3-66A0A0C4DH42 116 aa9.15□□□□□ -0.94
HLA-DOB-209ENST00000488325 SERTM2A0A1B0GWG4 89 aa9.15□□□□□ -0.94
HLA-DOB-209ENST00000488325 B4DEV8 164 aa9.15□□□□□ -0.94
HLA-DOB-209ENST00000488325 C9JCJ5 164 aa9.15□□□□□ -0.94
HLA-DOB-209ENST00000488325 K7EQM0 130 aa9.15□□□□□ -0.94
HLA-DOB-209ENST00000488325 APOHP02749 345 aaPredicted RBP9.15□□□□□ -0.94
HLA-DOB-209ENST00000488325 CD28P10747 220 aa9.15□□□□□ -0.94
HLA-DOB-209ENST00000488325 TAS2R60P59551 318 aa9.15□□□□□ -0.94
HLA-DOB-209ENST00000488325 TM4SF20Q53R12 229 aa9.15□□□□□ -0.94
HLA-DOB-209ENST00000488325 OR11H1Q8NG94 326 aa9.15□□□□□ -0.94
HLA-DOB-209ENST00000488325 C2CD4CQ8TF44 421 aa9.15□□□□□ -0.94
HLA-DOB-209ENST00000488325 ATG101Q9BSB4 218 aa9.15□□□□□ -0.94
HLA-DOB-209ENST00000488325 RHPN1-AS1Q9BWJ2 59 aa9.15□□□□□ -0.94
HLA-DOB-209ENST00000488325 SDF2L1Q9HCN8 221 aa9.15□□□□□ -0.94
HLA-DOB-209ENST00000488325 PEMTQ9UBM1 199 aa9.15□□□□□ -0.94
HLA-DOB-209ENST00000488325 SMAD5-AS1Q9Y6J3 95 aa9.15□□□□□ -0.94
HLA-DOB-209ENST00000488325 LY96Q9Y6Y9 160 aa9.15□□□□□ -0.94
HLA-DOB-209ENST00000488325 RPL35P42766 123 aaKnown RBP9.14□□□□□ -0.95
HLA-DOB-209ENST00000488325 GNG4P50150 75 aa9.14□□□□□ -0.95
HLA-DOB-209ENST00000488325 SYNJ2BPP57105 145 aa9.14□□□□□ -0.95
HLA-DOB-209ENST00000488325 UBE2G1P62253 170 aa9.14□□□□□ -0.95
HLA-DOB-209ENST00000488325 KLF5Q13887 457 aaPredicted RBP9.14□□□□□ -0.95
HLA-DOB-209ENST00000488325 CASC10Q5T4H9 136 aa9.14□□□□□ -0.95
HLA-DOB-209ENST00000488325 SAMD13Q5VXD3 122 aa9.14□□□□□ -0.95
HLA-DOB-209ENST00000488325 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.14□□□□□ -0.95
HLA-DOB-209ENST00000488325 EXOC3-AS1Q8N2X6 119 aa9.14□□□□□ -0.95
HLA-DOB-209ENST00000488325 C11orf44Q8N8P7 122 aa9.14□□□□□ -0.95
HLA-DOB-209ENST00000488325 C17orf77Q96MU5 243 aa9.14□□□□□ -0.95
HLA-DOB-209ENST00000488325 ZNF331Q9NQX6 463 aaPredicted RBP9.14□□□□□ -0.95
HLA-DOB-209ENST00000488325 U3KQK5 164 aa9.14□□□□□ -0.95
HLA-DOB-209ENST00000488325 RYR1P21817 5038 aa9.13□□□□□ -0.95
HLA-DOB-209ENST00000488325 TMEM213A2RRL7 107 aa9.13□□□□□ -0.95
HLA-DOB-209ENST00000488325 SLC17A3O00476 420 aa9.13□□□□□ -0.95
HLA-DOB-209ENST00000488325 CHEK1O14757 476 aa9.13□□□□□ -0.95
HLA-DOB-209ENST00000488325 TCRAP04437 139 aa9.13□□□□□ -0.95
HLA-DOB-209ENST00000488325 ADIRFQ15847 76 aa9.13□□□□□ -0.95
HLA-DOB-209ENST00000488325 TMEM183BQ1AE95 376 aa9.13□□□□□ -0.95
HLA-DOB-209ENST00000488325 ATRAIDQ6UW56 229 aa9.13□□□□□ -0.95
HLA-DOB-209ENST00000488325 C18orf65Q6ZTR6 163 aa9.13□□□□□ -0.95
HLA-DOB-209ENST00000488325 C8orf86Q6ZUL3 223 aa9.13□□□□□ -0.95
HLA-DOB-209ENST00000488325 MRPL53Q96EL3 112 aaKnown RBP9.13□□□□□ -0.95
HLA-DOB-209ENST00000488325 CITED2Q99967 270 aaPredicted RBP9.13□□□□□ -0.95
HLA-DOB-209ENST00000488325 DERL1Q9BUN8 251 aa9.13□□□□□ -0.95
HLA-DOB-209ENST00000488325 RPS10P5Q9NQ39 176 aa9.13□□□□□ -0.95
HLA-DOB-209ENST00000488325 RPH3ALQ9UNE2 315 aa9.13□□□□□ -0.95
HLA-DOB-209ENST00000488325 C7orf77A4D0Y5 90 aa9.12□□□□□ -0.95
HLA-DOB-209ENST00000488325 FBLL1A6NHQ2 334 aaKnown RBP9.12□□□□□ -0.95
HLA-DOB-209ENST00000488325 SLURP1P55000 103 aa9.12□□□□□ -0.95
HLA-DOB-209ENST00000488325 RPL23P62829 140 aaKnown RBP9.12□□□□□ -0.95
HLA-DOB-209ENST00000488325 GNG5P63218 68 aa9.12□□□□□ -0.95
HLA-DOB-209ENST00000488325 DEFB136Q30KP8 78 aa9.12□□□□□ -0.95
HLA-DOB-209ENST00000488325 CENPWQ5EE01 88 aa9.12□□□□□ -0.95
HLA-DOB-209ENST00000488325 TCF24Q7RTU0 167 aa9.12□□□□□ -0.95
HLA-DOB-209ENST00000488325 FMC1Q96HJ9 113 aa9.12□□□□□ -0.95
HLA-DOB-209ENST00000488325 A0A087WWC5 75 aa9.11□□□□□ -0.95
HLA-DOB-209ENST00000488325 TRBV6-1A0A0K0K1D8 114 aa9.11□□□□□ -0.95
HLA-DOB-209ENST00000488325 A0A1W2PRX2 142 aa9.11□□□□□ -0.95
HLA-DOB-209ENST00000488325 C2orf70A6NJV1 201 aa9.11□□□□□ -0.95
HLA-DOB-209ENST00000488325 DIRC3C9JPN6 131 aa9.11□□□□□ -0.95
HLA-DOB-209ENST00000488325 CCL24O00175 119 aa9.11□□□□□ -0.95
HLA-DOB-209ENST00000488325 RPL11P62913 178 aaKnown RBP9.11□□□□□ -0.95
HLA-DOB-209ENST00000488325 LINC01551Q86U37 167 aa9.11□□□□□ -0.95
HLA-DOB-209ENST00000488325 TMEM75Q8N9X5 138 aa9.11□□□□□ -0.95
HLA-DOB-209ENST00000488325 SMIM12Q96EX1 92 aa9.11□□□□□ -0.95
HLA-DOB-209ENST00000488325 C16orf92Q96LL3 132 aa9.11□□□□□ -0.95
HLA-DOB-209ENST00000488325 CTDSP1Q9GZU7 261 aa9.11□□□□□ -0.95
HLA-DOB-209ENST00000488325 NRN1Q9NPD7 142 aa9.11□□□□□ -0.95
HLA-DOB-209ENST00000488325 SCO1O75880 301 aa9.1□□□□□ -0.95
HLA-DOB-209ENST00000488325 MT-ND4LP03901 98 aa9.1□□□□□ -0.95
HLA-DOB-209ENST00000488325 IGLL1P15814 213 aa9.1□□□□□ -0.95
HLA-DOB-209ENST00000488325 CBLN1P23435 193 aa9.1□□□□□ -0.95
HLA-DOB-209ENST00000488325 ID1P41134 155 aa9.1□□□□□ -0.95
HLA-DOB-209ENST00000488325 FHL3Q13643 280 aa9.1□□□□□ -0.95
HLA-DOB-209ENST00000488325 GOLT1AQ6ZVE7 132 aa9.1□□□□□ -0.95
HLA-DOB-209ENST00000488325 BAGE2Q86Y30 109 aa9.1□□□□□ -0.95
HLA-DOB-209ENST00000488325 NDUFA11Q86Y39 141 aa9.1□□□□□ -0.95
HLA-DOB-209ENST00000488325 OR9G4Q8NGQ1 327 aa9.1□□□□□ -0.95
HLA-DOB-209ENST00000488325 MUC7Q8TAX7 377 aa9.1□□□□□ -0.95
HLA-DOB-209ENST00000488325 RAX2Q96IS3 184 aa9.1□□□□□ -0.95
HLA-DOB-209ENST00000488325 IGF2BP2-AS1Q96M15 143 aa9.1□□□□□ -0.95
HLA-DOB-209ENST00000488325 LYSTQ99698 3801 aa9.1□□□□□ -0.95
HLA-DOB-209ENST00000488325 BIN3Q9NQY0 253 aa9.1□□□□□ -0.95
HLA-DOB-209ENST00000488325 SMCO4Q9NRQ5 59 aa9.1□□□□□ -0.95
HLA-DOB-209ENST00000488325 KLF12Q9Y4X4 402 aa9.1□□□□□ -0.95
HLA-DOB-209ENST00000488325 TRBV20OR9-2A0A075B6H5 130 aa9.09□□□□□ -0.95
HLA-DOB-209ENST00000488325 TRAV34A0A0B4J273 112 aa9.09□□□□□ -0.95
HLA-DOB-209ENST00000488325 M0R3E3 92 aa9.09□□□□□ -0.95
HLA-DOB-209ENST00000488325 TSPAN4O14817 238 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms