RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 PXMP4Q9Y6I8 212 aa13.61□□□□□ -0.23
CD55-209ENST00000488171 HTN1P15515 57 aa13.6□□□□□ -0.23
CD55-209ENST00000488171 RPL29P47914 159 aaKnown RBP13.6□□□□□ -0.23
CD55-209ENST00000488171 ASAH1Q13510 395 aa13.6□□□□□ -0.23
CD55-209ENST00000488171 C15orf53Q8NAA6 179 aa13.6□□□□□ -0.23
CD55-209ENST00000488171 OR1L4Q8NGR5 311 aa13.6□□□□□ -0.23
CD55-209ENST00000488171 C16orf74Q96GX8 76 aa13.6□□□□□ -0.23
CD55-209ENST00000488171 SLC39A9Q9NUM3 307 aa13.6□□□□□ -0.23
CD55-209ENST00000488171 DNAH17Q9UFH2 4485 aa13.6□□□□□ -0.23
CD55-209ENST00000488171 BAXQ07812 192 aa13.59□□□□□ -0.23
CD55-209ENST00000488171 MZT2BQ6NZ67 158 aa13.59□□□□□ -0.23
CD55-209ENST00000488171 OR10J6PQ8NGY7 276 aa13.59□□□□□ -0.23
CD55-209ENST00000488171 RNASE8Q8TDE3 154 aaKnown RBP13.59□□□□□ -0.23
CD55-209ENST00000488171 CHAC2Q8WUX2 184 aa13.59□□□□□ -0.23
CD55-209ENST00000488171 PFDN5Q99471 154 aa13.59□□□□□ -0.23
CD55-209ENST00000488171 ZNF586Q9NXT0 402 aa13.59□□□□□ -0.23
CD55-209ENST00000488171 NACAE9PAV3 2078 aa13.59□□□□□ -0.23
CD55-209ENST00000488171 H7BYZ3 331 aa13.58□□□□□ -0.23
CD55-209ENST00000488171 HBG1P69891 147 aa13.58□□□□□ -0.23
CD55-209ENST00000488171 HBG2P69892 147 aa13.58□□□□□ -0.23
CD55-209ENST00000488171 GUK1Q16774 197 aa13.58□□□□□ -0.23
CD55-209ENST00000488171 STX12Q86Y82 276 aa13.58□□□□□ -0.23
CD55-209ENST00000488171 S100ZQ8WXG8 99 aa13.58□□□□□ -0.23
CD55-209ENST00000488171 C20orf144Q9BQM9 153 aa13.58□□□□□ -0.23
CD55-209ENST00000488171 CBY3A6NI87 242 aa13.58□□□□□ -0.24
CD55-209ENST00000488171 PRSS29PA6NIE9 313 aa13.58□□□□□ -0.24
CD55-209ENST00000488171 FGF7P21781 194 aa13.58□□□□□ -0.24
CD55-209ENST00000488171 GFI1BQ5VTD9 330 aa13.58□□□□□ -0.24
CD55-209ENST00000488171 ZNF493Q6ZR52 646 aa13.58□□□□□ -0.24
CD55-209ENST00000488171 TMEM263Q8WUH6 116 aaKnown RBP13.58□□□□□ -0.24
CD55-209ENST00000488171 TIMM8BQ9Y5J9 83 aaPredicted RBP13.58□□□□□ -0.24
CD55-209ENST00000488171 F5H768 121 aa13.57□□□□□ -0.24
CD55-209ENST00000488171 ZNF253O75346 499 aa13.57□□□□□ -0.24
CD55-209ENST00000488171 ATP5G1P05496 136 aa13.57□□□□□ -0.24
CD55-209ENST00000488171 ATP5G3P48201 142 aa13.57□□□□□ -0.24
CD55-209ENST00000488171 ATP6V1FQ16864 119 aa13.57□□□□□ -0.24
CD55-209ENST00000488171 GPN1Q9HCN4 374 aaPredicted RBP13.57□□□□□ -0.24
CD55-209ENST00000488171 NOP10Q9NPE3 64 aaKnown RBP13.57□□□□□ -0.24
CD55-209ENST00000488171 KIAA1109Q2LD37 5005 aa13.56□□□□□ -0.24
CD55-209ENST00000488171 NPIPB6E9PJ23 425 aa13.56□□□□□ -0.24
CD55-209ENST00000488171 CT45A10P0DMU9 189 aa13.56□□□□□ -0.24
CD55-209ENST00000488171 TRBV19A0A075B6N1 114 aa13.55□□□□□ -0.24
CD55-209ENST00000488171 SIX6O95475 246 aa13.55□□□□□ -0.24
CD55-209ENST00000488171 ODF3Q96PU9 254 aa13.55□□□□□ -0.24
CD55-209ENST00000488171 NPCDR1Q9BY65 106 aa13.55□□□□□ -0.24
CD55-209ENST00000488171 TMEM14CQ9P0S9 112 aa13.55□□□□□ -0.24
CD55-209ENST00000488171 J3KRW8 73 aa13.54□□□□□ -0.24
CD55-209ENST00000488171 MPDU1O75352 247 aa13.54□□□□□ -0.24
CD55-209ENST00000488171 UPK1BO75841 260 aa13.54□□□□□ -0.24
CD55-209ENST00000488171 NDUFB4O95168 129 aa13.54□□□□□ -0.24
CD55-209ENST00000488171 FAM3BP58499 235 aaPredicted RBP13.54□□□□□ -0.24
CD55-209ENST00000488171 NHLH2Q02577 135 aa13.54□□□□□ -0.24
CD55-209ENST00000488171 GCSAMLQ5JQS6 135 aa13.54□□□□□ -0.24
CD55-209ENST00000488171 LINC00612Q8N6U2 182 aa13.54□□□□□ -0.24
CD55-209ENST00000488171 ENKURQ8TC29 256 aa13.54□□□□□ -0.24
CD55-209ENST00000488171 KRTAP17-1Q9BYP8 105 aa13.54□□□□□ -0.24
CD55-209ENST00000488171 M0R3E3 92 aa13.53□□□□□ -0.24
CD55-209ENST00000488171 LEPP41159 167 aa13.53□□□□□ -0.24
CD55-209ENST00000488171 IFITM3Q01628 133 aa13.53□□□□□ -0.24
CD55-209ENST00000488171 MRPL53Q96EL3 112 aaKnown RBP13.53□□□□□ -0.24
CD55-209ENST00000488171 PKHD1P08F94 4074 aa13.52□□□□□ -0.24
CD55-209ENST00000488171 TRAV12-3A0A0B4J271 114 aa13.52□□□□□ -0.25
CD55-209ENST00000488171 NUDT3O95989 172 aa13.52□□□□□ -0.25
CD55-209ENST00000488171 PYYP10082 97 aa13.52□□□□□ -0.25
CD55-209ENST00000488171 HIST1H1EP10412 219 aaKnown RBP13.52□□□□□ -0.25
CD55-209ENST00000488171 CCDC28AQ8IWP9 274 aa13.52□□□□□ -0.25
CD55-209ENST00000488171 OR5C1Q8NGR4 320 aa13.52□□□□□ -0.25
CD55-209ENST00000488171 THAP6Q8TBB0 222 aa13.52□□□□□ -0.25
CD55-209ENST00000488171 ATG101Q9BSB4 218 aa13.52□□□□□ -0.25
CD55-209ENST00000488171 NMES1Q9C002 83 aa13.52□□□□□ -0.25
CD55-209ENST00000488171 OR5AC2Q9NZP5 309 aa13.52□□□□□ -0.25
CD55-209ENST00000488171 H0YIZ8 118 aa13.51□□□□□ -0.25
CD55-209ENST00000488171 ERCC8Q13216 396 aa13.51□□□□□ -0.25
CD55-209ENST00000488171 RNF141Q8WVD5 230 aa13.51□□□□□ -0.25
CD55-209ENST00000488171 SLC25A2Q9BXI2 301 aa13.51□□□□□ -0.25
CD55-209ENST00000488171 PKD1P98161 4303 aa13.51□□□□□ -0.25
CD55-209ENST00000488171 E5RGE8 158 aa13.5□□□□□ -0.25
CD55-209ENST00000488171 PDE6HQ13956 83 aa13.5□□□□□ -0.25
CD55-209ENST00000488171 LRRC37A5PQ49AS3 106 aa13.5□□□□□ -0.25
CD55-209ENST00000488171 ZNRF2Q8NHG8 242 aa13.5□□□□□ -0.25
CD55-209ENST00000488171 SLC25A31Q9H0C2 315 aa13.5□□□□□ -0.25
CD55-209ENST00000488171 TIMM9Q9Y5J7 89 aa13.5□□□□□ -0.25
CD55-209ENST00000488171 A6NHS1 94 aa13.49□□□□□ -0.25
CD55-209ENST00000488171 RLN2P04090 185 aa13.49□□□□□ -0.25
CD55-209ENST00000488171 C1orf134Q5TEV5 83 aa13.49□□□□□ -0.25
CD55-209ENST00000488171 EXOC3-AS1Q8N2X6 119 aa13.49□□□□□ -0.25
CD55-209ENST00000488171 BLNKQ8WV28 456 aa13.49□□□□□ -0.25
CD55-209ENST00000488171 FAM167A-AS1Q96KT0 104 aa13.49□□□□□ -0.25
CD55-209ENST00000488171 FAM19A4Q96LR4 140 aa13.49□□□□□ -0.25
CD55-209ENST00000488171 PYGO2Q9BRQ0 406 aa13.49□□□□□ -0.25
CD55-209ENST00000488171 PRELID1Q9Y255 219 aa13.49□□□□□ -0.25
CD55-209ENST00000488171 PRAF2O60831 178 aa13.48□□□□□ -0.25
CD55-209ENST00000488171 SLC25A5P05141 298 aaKnown RBP13.48□□□□□ -0.25
CD55-209ENST00000488171 CLINT1Q14677 625 aa13.48□□□□□ -0.25
CD55-209ENST00000488171 MIR17HGQ75NE6 70 aa13.48□□□□□ -0.25
CD55-209ENST00000488171 AGPAT4-IT1Q9H0P7 198 aa13.48□□□□□ -0.25
CD55-209ENST00000488171 LINC00588Q9Y4M8 146 aa13.48□□□□□ -0.25
CD55-209ENST00000488171 DYNC1H1Q14204 4646 aaKnown RBP13.48□□□□□ -0.25
CD55-209ENST00000488171 GAGE12BA1L429 117 aa13.47□□□□□ -0.25
CD55-209ENST00000488171 C7orf71A4D174 169 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms