RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 CCDC71LQ8N9Z2 235 aa3.68□□□□□ -1.82
COL4A3-206ENST00000487633 OR4D10Q8NGI6 311 aa3.68□□□□□ -1.82
COL4A3-206ENST00000487633 OR51S1Q8NGJ8 323 aa3.68□□□□□ -1.82
COL4A3-206ENST00000487633 MARCH1Q8TCQ1 289 aa3.68□□□□□ -1.82
COL4A3-206ENST00000487633 ZNF431Q8TF32 576 aaPredicted RBP3.68□□□□□ -1.82
COL4A3-206ENST00000487633 SCGB3A2Q96PL1 93 aa3.68□□□□□ -1.82
COL4A3-206ENST00000487633 TP53RKQ96S44 253 aa3.68□□□□□ -1.82
COL4A3-206ENST00000487633 PRRT1Q99946 306 aa3.68□□□□□ -1.82
COL4A3-206ENST00000487633 SOSTQ9BQB4 213 aa3.68□□□□□ -1.82
COL4A3-206ENST00000487633 MRPL32Q9BYC8 188 aaKnown RBP3.68□□□□□ -1.82
COL4A3-206ENST00000487633 DAZ3Q9NR90 486 aaKnown RBP3.68□□□□□ -1.82
COL4A3-206ENST00000487633 SCP2D1Q9UJQ7 156 aa3.68□□□□□ -1.82
COL4A3-206ENST00000487633 C14orf166Q9Y224 244 aaKnown RBP3.68□□□□□ -1.82
COL4A3-206ENST00000487633 V9GYH0 126 aa3.68□□□□□ -1.82
COL4A3-206ENST00000487633 TRAV5A0A0B4J249 113 aa3.67□□□□□ -1.82
COL4A3-206ENST00000487633 TEX13DA0A0J9YY54 714 aaPredicted RBP3.67□□□□□ -1.82
COL4A3-206ENST00000487633 A0A0U1RQV1 116 aa3.67□□□□□ -1.82
COL4A3-206ENST00000487633 ANKRD20A5PA0PJZ0 165 aa3.67□□□□□ -1.82
COL4A3-206ENST00000487633 PHOX2AO14813 284 aa3.67□□□□□ -1.82
COL4A3-206ENST00000487633 ATG12O94817 140 aa3.67□□□□□ -1.82
COL4A3-206ENST00000487633 CHTF8P0CG12 524 aa3.67□□□□□ -1.82
COL4A3-206ENST00000487633 CT45A10P0DMU9 189 aa3.67□□□□□ -1.82
COL4A3-206ENST00000487633 SLC25A4P12235 298 aa3.67□□□□□ -1.82
COL4A3-206ENST00000487633 AKR1C4P17516 323 aa3.67□□□□□ -1.82
COL4A3-206ENST00000487633 SUB1P53999 127 aaKnown RBP eCLIP3.67□□□□□ -1.82
COL4A3-206ENST00000487633 PIGPP57054 158 aa3.67□□□□□ -1.82
COL4A3-206ENST00000487633 ASAH1Q13510 395 aa3.67□□□□□ -1.82
COL4A3-206ENST00000487633 TRIM16LQ309B1 348 aa3.67□□□□□ -1.82
COL4A3-206ENST00000487633 SP6Q3SY56 376 aa3.67□□□□□ -1.82
COL4A3-206ENST00000487633 C1orf194Q5T5A4 169 aa3.67□□□□□ -1.82
COL4A3-206ENST00000487633 MORN5Q5VZ52 161 aa3.67□□□□□ -1.82
COL4A3-206ENST00000487633 CCDC28AQ8IWP9 274 aa3.67□□□□□ -1.82
COL4A3-206ENST00000487633 OR13C8Q8NGS7 320 aa3.67□□□□□ -1.82
COL4A3-206ENST00000487633 RNASE11Q8TAA1 199 aaKnown RBP3.67□□□□□ -1.82
COL4A3-206ENST00000487633 RRNAD1Q96FB5 475 aaKnown RBP3.67□□□□□ -1.82
COL4A3-206ENST00000487633 ZNF486Q96H40 463 aaPredicted RBP3.67□□□□□ -1.82
COL4A3-206ENST00000487633 LINC00477Q96M19 166 aa3.67□□□□□ -1.82
COL4A3-206ENST00000487633 MUC21A0A0G2JKD1 596 aa3.66□□□□□ -1.82
COL4A3-206ENST00000487633 C3orf85A0A1B0GTC6 90 aa3.66□□□□□ -1.82
COL4A3-206ENST00000487633 H3BTX0 84 aa3.66□□□□□ -1.82
COL4A3-206ENST00000487633 BTN1A1Q13410 526 aa3.66□□□□□ -1.82
COL4A3-206ENST00000487633 KLF9Q13886 244 aaPredicted RBP3.66□□□□□ -1.82
COL4A3-206ENST00000487633 ZNF846Q147U1 533 aa3.66□□□□□ -1.82
COL4A3-206ENST00000487633 SURF2Q15527 256 aaPredicted RBP3.66□□□□□ -1.82
COL4A3-206ENST00000487633 PRR9Q5T870 116 aa3.66□□□□□ -1.82
COL4A3-206ENST00000487633 LHFPL1Q86WI0 220 aa3.66□□□□□ -1.82
COL4A3-206ENST00000487633 SLC24A4Q8NFF2 622 aa3.66□□□□□ -1.82
COL4A3-206ENST00000487633 LHFPL5Q8TAF8 219 aa3.66□□□□□ -1.82
COL4A3-206ENST00000487633 S100ZQ8WXG8 99 aa3.66□□□□□ -1.82
COL4A3-206ENST00000487633 TRIM63Q969Q1 353 aa3.66□□□□□ -1.82
COL4A3-206ENST00000487633 PPP1R14BQ96C90 147 aa3.66□□□□□ -1.82
COL4A3-206ENST00000487633 RPUSD4Q96CM3 377 aaKnown RBP3.66□□□□□ -1.82
COL4A3-206ENST00000487633 VGLL1Q99990 258 aa3.66□□□□□ -1.82
COL4A3-206ENST00000487633 SRRQ9GZT4 340 aa3.66□□□□□ -1.82
COL4A3-206ENST00000487633 KCNIP3Q9Y2W7 256 aa3.66□□□□□ -1.82
COL4A3-206ENST00000487633 KIF25-AS1Q9Y6Z4 181 aa3.66□□□□□ -1.82
COL4A3-206ENST00000487633 IGHV3-16A0A0C4DH30 117 aa3.65□□□□□ -1.83
COL4A3-206ENST00000487633 NAP1L6A6NFF2 107 aa3.65□□□□□ -1.83
COL4A3-206ENST00000487633 ZFP92A6NM28 416 aa3.65□□□□□ -1.83
COL4A3-206ENST00000487633 SLC17A3O00476 420 aa3.65□□□□□ -1.83
COL4A3-206ENST00000487633 MRPS12O15235 138 aaKnown RBP3.65□□□□□ -1.83
COL4A3-206ENST00000487633 B3GALNT1O75752 331 aa3.65□□□□□ -1.83
COL4A3-206ENST00000487633 ANXA3P12429 323 aa3.65□□□□□ -1.83
COL4A3-206ENST00000487633 IL7P13232 177 aa3.65□□□□□ -1.83
COL4A3-206ENST00000487633 VAMP1P23763 118 aa3.65□□□□□ -1.83
COL4A3-206ENST00000487633 GALR1P47211 349 aa3.65□□□□□ -1.83
COL4A3-206ENST00000487633 MEOX2P50222 304 aa3.65□□□□□ -1.83
COL4A3-206ENST00000487633 AKR1C2P52895 323 aa3.65□□□□□ -1.83
COL4A3-206ENST00000487633 TCL1AP56279 114 aa3.65□□□□□ -1.83
COL4A3-206ENST00000487633 RND3P61587 244 aa3.65□□□□□ -1.83
COL4A3-206ENST00000487633 BAK1Q16611 211 aa3.65□□□□□ -1.83
COL4A3-206ENST00000487633 NMSQ5H8A3 153 aa3.65□□□□□ -1.83
COL4A3-206ENST00000487633 WDR73Q6P4I2 378 aa3.65□□□□□ -1.83
COL4A3-206ENST00000487633 RNASEH2CQ8TDP1 164 aaKnown RBP3.65□□□□□ -1.83
COL4A3-206ENST00000487633 DEDD2Q8WXF8 326 aa3.65□□□□□ -1.83
COL4A3-206ENST00000487633 TMEM37Q8WXS4 190 aa3.65□□□□□ -1.83
COL4A3-206ENST00000487633 SLC25A21Q9BQT8 299 aaPredicted RBP3.65□□□□□ -1.83
COL4A3-206ENST00000487633 RTBDNQ9BSG5 229 aaPredicted RBP3.65□□□□□ -1.83
COL4A3-206ENST00000487633 DPH3P1Q9H4G8 78 aa3.65□□□□□ -1.83
COL4A3-206ENST00000487633 NAA60Q9H7X0 242 aa3.65□□□□□ -1.83
COL4A3-206ENST00000487633 PPP1R14DQ9NXH3 145 aa3.65□□□□□ -1.83
COL4A3-206ENST00000487633 GPR132Q9UNW8 380 aa3.65□□□□□ -1.83
COL4A3-206ENST00000487633 TRGV4A0A0C4DH28 118 aa3.64□□□□□ -1.83
COL4A3-206ENST00000487633 A0A1B0GVG6 124 aa3.64□□□□□ -1.83
COL4A3-206ENST00000487633 CRYM-AS1A6NIL9 109 aa3.64□□□□□ -1.83
COL4A3-206ENST00000487633 H3BRN7 92 aa3.64□□□□□ -1.83
COL4A3-206ENST00000487633 SCGB2A1O75556 95 aa3.64□□□□□ -1.83
COL4A3-206ENST00000487633 CCR6P51684 374 aa3.64□□□□□ -1.83
COL4A3-206ENST00000487633 SRPXP78539 464 aa3.64□□□□□ -1.83
COL4A3-206ENST00000487633 ERCC8Q13216 396 aa3.64□□□□□ -1.83
COL4A3-206ENST00000487633 AARDQ4LEZ3 155 aa3.64□□□□□ -1.83
COL4A3-206ENST00000487633 OR10J3Q5JRS4 329 aa3.64□□□□□ -1.83
COL4A3-206ENST00000487633 TMEM268Q5VZI3 342 aa3.64□□□□□ -1.83
COL4A3-206ENST00000487633 MZT2BQ6NZ67 158 aa3.64□□□□□ -1.83
COL4A3-206ENST00000487633 SDIM1Q6ZPB5 146 aa3.64□□□□□ -1.83
COL4A3-206ENST00000487633 LINC00299Q6ZSB3 139 aa3.64□□□□□ -1.83
COL4A3-206ENST00000487633 SDHCQ99643 169 aaPredicted RBP3.64□□□□□ -1.83
COL4A3-206ENST00000487633 C20orf144Q9BQM9 153 aa3.64□□□□□ -1.83
COL4A3-206ENST00000487633 PDCD10Q9BUL8 212 aa3.64□□□□□ -1.83
COL4A3-206ENST00000487633 CCDC32Q9BV29 185 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms