RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 PRM2P04554 102 aa14.59□□□□□ -0.07
HDAC4-209ENST00000487617 RPP25LQ8N5L8 163 aaKnown RBP14.59□□□□□ -0.07
HDAC4-209ENST00000487617 KCNIP2Q9NS61 270 aa14.59□□□□□ -0.07
HDAC4-209ENST00000487617 PLA2G2EQ9NZK7 142 aa14.59□□□□□ -0.07
HDAC4-209ENST00000487617 TMEM14CQ9P0S9 112 aa14.59□□□□□ -0.07
HDAC4-209ENST00000487617 ZNF253O75346 499 aa14.58□□□□□ -0.08
HDAC4-209ENST00000487617 CDKN1BP46527 198 aa14.58□□□□□ -0.08
HDAC4-209ENST00000487617 LINC01587Q99440 93 aa14.58□□□□□ -0.08
HDAC4-209ENST00000487617 ATP5SQ99766 215 aa14.58□□□□□ -0.08
HDAC4-209ENST00000487617 HSPB11Q9Y547 144 aa14.58□□□□□ -0.08
HDAC4-209ENST00000487617 ALG5Q9Y673 324 aa14.58□□□□□ -0.08
HDAC4-209ENST00000487617 TRBV19A0A075B6N1 114 aa14.57□□□□□ -0.08
HDAC4-209ENST00000487617 PYYP10082 97 aa14.57□□□□□ -0.08
HDAC4-209ENST00000487617 HIST1H1EP10412 219 aaKnown RBP14.57□□□□□ -0.08
HDAC4-209ENST00000487617 TMEM256Q8N2U0 113 aa14.57□□□□□ -0.08
HDAC4-209ENST00000487617 MBD2Q9UBB5 411 aa14.57□□□□□ -0.08
HDAC4-209ENST00000487617 TIMM9Q9Y5J7 89 aa14.57□□□□□ -0.08
HDAC4-209ENST00000487617 HYDINQ4G0P3 5121 aa14.57□□□□□ -0.08
HDAC4-209ENST00000487617 C17orf112F2Z3M2 114 aa14.56□□□□□ -0.08
HDAC4-209ENST00000487617 PTTG1O95997 202 aa14.56□□□□□ -0.08
HDAC4-209ENST00000487617 RPL12P30050 165 aaKnown RBP14.56□□□□□ -0.08
HDAC4-209ENST00000487617 SLC25A2Q9BXI2 301 aa14.56□□□□□ -0.08
HDAC4-209ENST00000487617 SMIM3Q9BZL3 60 aa14.56□□□□□ -0.08
HDAC4-209ENST00000487617 HTN3P15516 51 aa14.55□□□□□ -0.08
HDAC4-209ENST00000487617 TSPOP30536 169 aa14.55□□□□□ -0.08
HDAC4-209ENST00000487617 DAD1P61803 113 aa14.55□□□□□ -0.08
HDAC4-209ENST00000487617 MIR17HGQ75NE6 70 aa14.55□□□□□ -0.08
HDAC4-209ENST00000487617 BLNKQ8WV28 456 aa14.55□□□□□ -0.08
HDAC4-209ENST00000487617 MRPL53Q96EL3 112 aaKnown RBP14.55□□□□□ -0.08
HDAC4-209ENST00000487617 NDUFAF3Q9BU61 184 aa14.55□□□□□ -0.08
HDAC4-209ENST00000487617 PARD6GQ9BYG4 376 aaPredicted RBP14.55□□□□□ -0.08
HDAC4-209ENST00000487617 NDUFB4O95168 129 aa14.54□□□□□ -0.08
HDAC4-209ENST00000487617 IFNA5P01569 189 aa14.54□□□□□ -0.08
HDAC4-209ENST00000487617 HTN1P15515 57 aa14.54□□□□□ -0.08
HDAC4-209ENST00000487617 AZU1P20160 251 aa14.54□□□□□ -0.08
HDAC4-209ENST00000487617 TAS2R60P59551 318 aa14.54□□□□□ -0.08
HDAC4-209ENST00000487617 PDE6HQ13956 83 aa14.54□□□□□ -0.08
HDAC4-209ENST00000487617 OXA1LQ15070 435 aa14.54□□□□□ -0.08
HDAC4-209ENST00000487617 SCGB1C1Q8TD33 95 aa14.54□□□□□ -0.08
HDAC4-209ENST00000487617 FAM167A-AS1Q96KT0 104 aa14.54□□□□□ -0.08
HDAC4-209ENST00000487617 NPIPB6E9PJ23 425 aa14.53□□□□□ -0.08
HDAC4-209ENST00000487617 M0R3E3 92 aa14.53□□□□□ -0.08
HDAC4-209ENST00000487617 KIR3DS1Q14943 382 aa14.53□□□□□ -0.08
HDAC4-209ENST00000487617 MRPL32Q9BYC8 188 aaKnown RBP14.53□□□□□ -0.08
HDAC4-209ENST00000487617 OR51M1Q9H341 326 aa14.53□□□□□ -0.08
HDAC4-209ENST00000487617 PRELID1Q9Y255 219 aa14.53□□□□□ -0.08
HDAC4-209ENST00000487617 LYRM9A8MSI8 78 aa14.52□□□□□ -0.09
HDAC4-209ENST00000487617 J3KRW8 73 aa14.52□□□□□ -0.09
HDAC4-209ENST00000487617 CT45A10P0DMU9 189 aa14.52□□□□□ -0.09
HDAC4-209ENST00000487617 LEPP41159 167 aa14.52□□□□□ -0.09
HDAC4-209ENST00000487617 FFAR4Q5NUL3 377 aa14.52□□□□□ -0.09
HDAC4-209ENST00000487617 EXOC3-AS1Q8N2X6 119 aa14.52□□□□□ -0.09
HDAC4-209ENST00000487617 C20orf144Q9BQM9 153 aa14.52□□□□□ -0.09
HDAC4-209ENST00000487617 AAMDCQ9H7C9 122 aa14.52□□□□□ -0.09
HDAC4-209ENST00000487617 FUT9Q9Y231 359 aa14.52□□□□□ -0.09
HDAC4-209ENST00000487617 H7BYZ3 331 aa14.51□□□□□ -0.09
HDAC4-209ENST00000487617 NBEAP1P0C6P0 100 aa14.51□□□□□ -0.09
HDAC4-209ENST00000487617 GFI1BQ5VTD9 330 aa14.51□□□□□ -0.09
HDAC4-209ENST00000487617 FAM210BQ96KR6 192 aa14.51□□□□□ -0.09
HDAC4-209ENST00000487617 ODF3Q96PU9 254 aa14.51□□□□□ -0.09
HDAC4-209ENST00000487617 PAXXQ9BUH6 204 aa14.51□□□□□ -0.09
HDAC4-209ENST00000487617 MED28Q9H204 178 aa14.51□□□□□ -0.09
HDAC4-209ENST00000487617 PLAC8L1A1L4L8 177 aa14.5□□□□□ -0.09
HDAC4-209ENST00000487617 OR10J4P0C629 311 aa14.5□□□□□ -0.09
HDAC4-209ENST00000487617 DEFB130BP0DP73 79 aa14.5□□□□□ -0.09
HDAC4-209ENST00000487617 DEFB130AP0DP74 79 aa14.5□□□□□ -0.09
HDAC4-209ENST00000487617 ERCC8Q13216 396 aa14.5□□□□□ -0.09
HDAC4-209ENST00000487617 ICAM4Q14773 271 aa14.5□□□□□ -0.09
HDAC4-209ENST00000487617 C16orf74Q96GX8 76 aa14.5□□□□□ -0.09
HDAC4-209ENST00000487617 WFDC1Q9HC57 220 aa14.5□□□□□ -0.09
HDAC4-209ENST00000487617 OR7C2O60412 319 aa14.49□□□□□ -0.09
HDAC4-209ENST00000487617 FCN2Q15485 313 aa14.49□□□□□ -0.09
HDAC4-209ENST00000487617 RNF141Q8WVD5 230 aa14.49□□□□□ -0.09
HDAC4-209ENST00000487617 FAM122CQ6P4D5 195 aa14.48□□□□□ -0.09
HDAC4-209ENST00000487617 ZNF493Q6ZR52 646 aa14.48□□□□□ -0.09
HDAC4-209ENST00000487617 FXYD5Q96DB9 178 aa14.48□□□□□ -0.09
HDAC4-209ENST00000487617 TRAV12-3A0A0B4J271 114 aa14.47□□□□□ -0.09
HDAC4-209ENST00000487617 P0DMU3 169 aa14.47□□□□□ -0.09
HDAC4-209ENST00000487617 FAM231AP0DMU4 169 aa14.47□□□□□ -0.09
HDAC4-209ENST00000487617 FAM231CP0DMU5 169 aa14.47□□□□□ -0.09
HDAC4-209ENST00000487617 CCDC28AQ8IWP9 274 aa14.47□□□□□ -0.09
HDAC4-209ENST00000487617 RNASE8Q8TDE3 154 aaKnown RBP14.47□□□□□ -0.09
HDAC4-209ENST00000487617 TMEM263Q8WUH6 116 aaKnown RBP14.47□□□□□ -0.09
HDAC4-209ENST00000487617 LINC00477Q96M19 166 aa14.47□□□□□ -0.09
HDAC4-209ENST00000487617 AGPAT4-IT1Q9H0P7 198 aa14.47□□□□□ -0.09
HDAC4-209ENST00000487617 TIMM8BQ9Y5J9 83 aaPredicted RBP14.47□□□□□ -0.09
HDAC4-209ENST00000487617 IGKV2-40A0A087WW87 121 aaPredicted RBP14.46□□□□□ -0.09
HDAC4-209ENST00000487617 IGKV2D-40P01614 121 aaPredicted RBP14.46□□□□□ -0.09
HDAC4-209ENST00000487617 PHYHIPLQ96FC7 376 aa14.46□□□□□ -0.09
HDAC4-209ENST00000487617 NOP10Q9NPE3 64 aaKnown RBP14.46□□□□□ -0.09
HDAC4-209ENST00000487617 SLC25A5P05141 298 aaKnown RBP14.45□□□□□ -0.1
HDAC4-209ENST00000487617 TAS2R45P59539 299 aa14.45□□□□□ -0.1
HDAC4-209ENST00000487617 UBE2L3P68036 154 aaKnown RBP14.45□□□□□ -0.1
HDAC4-209ENST00000487617 KHDC3LQ587J8 217 aa14.45□□□□□ -0.1
HDAC4-209ENST00000487617 TMEM88Q6PEY1 159 aa14.45□□□□□ -0.1
HDAC4-209ENST00000487617 C9orf47Q6ZRZ4 202 aa14.45□□□□□ -0.1
HDAC4-209ENST00000487617 ZNF503Q96F45 646 aa14.45□□□□□ -0.1
HDAC4-209ENST00000487617 C7orf71A4D174 169 aa14.44□□□□□ -0.1
HDAC4-209ENST00000487617 ACOT6Q3I5F7 207 aaPredicted RBP14.44□□□□□ -0.1
HDAC4-209ENST00000487617 TMEM78Q5T7P6 136 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms