RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 C3orf36Q3SXR2 165 aa11.85□□□□□ -0.51
EPHB4-206ENST00000487222 DAZ1Q9NQZ3 744 aaKnown RBP11.84□□□□□ -0.51
EPHB4-206ENST00000487222 MSRB2Q9Y3D2 182 aa11.84□□□□□ -0.51
EPHB4-206ENST00000487222 HEATR5AQ86XA9 2040 aa11.84□□□□□ -0.51
EPHB4-206ENST00000487222 GNLYP22749 145 aa11.84□□□□□ -0.51
EPHB4-206ENST00000487222 SAA4P35542 130 aa11.84□□□□□ -0.51
EPHB4-206ENST00000487222 ERCC8Q13216 396 aa11.84□□□□□ -0.51
EPHB4-206ENST00000487222 FAM104BQ5XKR9 115 aa11.84□□□□□ -0.51
EPHB4-206ENST00000487222 ZFAND6Q6FIF0 208 aa11.84□□□□□ -0.51
EPHB4-206ENST00000487222 ZNF833PQ6ZTB9 187 aa11.84□□□□□ -0.51
EPHB4-206ENST00000487222 PIP4P2Q8N4L2 257 aa11.84□□□□□ -0.51
EPHB4-206ENST00000487222 TRGV1A0A0A0MS02 117 aa11.84□□□□□ -0.51
EPHB4-206ENST00000487222 UNQ6494/PRO21346Q6UXR6 183 aa11.84□□□□□ -0.51
EPHB4-206ENST00000487222 WDR86Q86TI4 376 aa11.84□□□□□ -0.51
EPHB4-206ENST00000487222 STPG4Q8N801 248 aa11.84□□□□□ -0.51
EPHB4-206ENST00000487222 DEFB104AQ8WTQ1 72 aa11.84□□□□□ -0.51
EPHB4-206ENST00000487222 TRBV19A0A075B6N1 114 aa11.84□□□□□ -0.51
EPHB4-206ENST00000487222 PRSS46E5RG02 174 aa11.84□□□□□ -0.51
EPHB4-206ENST00000487222 ESDP10768 282 aa11.84□□□□□ -0.51
EPHB4-206ENST00000487222 A0A087WX48 190 aa11.83□□□□□ -0.52
EPHB4-206ENST00000487222 TMEM213A2RRL7 107 aa11.83□□□□□ -0.52
EPHB4-206ENST00000487222 LY6HO94772 140 aa11.83□□□□□ -0.52
EPHB4-206ENST00000487222 S100A7L2Q5SY68 101 aa11.83□□□□□ -0.52
EPHB4-206ENST00000487222 V9GYV3 84 aa11.83□□□□□ -0.52
EPHB4-206ENST00000487222 IL15RAQ13261 267 aa11.83□□□□□ -0.52
EPHB4-206ENST00000487222 NPC2P61916 151 aa11.83□□□□□ -0.52
EPHB4-206ENST00000487222 C2orf82Q6UX34 121 aa11.83□□□□□ -0.52
EPHB4-206ENST00000487222 LY6G5BQ8NDX9 201 aa11.83□□□□□ -0.52
EPHB4-206ENST00000487222 FAM110DQ8TAY7 271 aaPredicted RBP11.83□□□□□ -0.52
EPHB4-206ENST00000487222 SNHG12Q9BXW3 62 aa11.83□□□□□ -0.52
EPHB4-206ENST00000487222 PAX4O43316 350 aa11.82□□□□□ -0.52
EPHB4-206ENST00000487222 C17orf58Q2M2W7 97 aa11.82□□□□□ -0.52
EPHB4-206ENST00000487222 DTX1Q86Y01 620 aa11.82□□□□□ -0.52
EPHB4-206ENST00000487222 IGLV3-1P01715 115 aa11.82□□□□□ -0.52
EPHB4-206ENST00000487222 CFHR2P36980 270 aa11.82□□□□□ -0.52
EPHB4-206ENST00000487222 TSC2P49815 1807 aa11.82□□□□□ -0.52
EPHB4-206ENST00000487222 NLRC5Q86WI3 1866 aa11.82□□□□□ -0.52
EPHB4-206ENST00000487222 MYMXA0A1B0GTQ4 84 aa11.82□□□□□ -0.52
EPHB4-206ENST00000487222 OVOL3O00110 214 aa11.82□□□□□ -0.52
EPHB4-206ENST00000487222 SAP30O75446 220 aa11.82□□□□□ -0.52
EPHB4-206ENST00000487222 DOCK11Q5JSL3 2073 aa11.82□□□□□ -0.52
EPHB4-206ENST00000487222 A0A087WWL8 130 aa11.82□□□□□ -0.52
EPHB4-206ENST00000487222 IGLC2P0DOY2 106 aa11.81□□□□□ -0.52
EPHB4-206ENST00000487222 IGLC3P0DOY3 106 aa11.81□□□□□ -0.52
EPHB4-206ENST00000487222 TIMM21Q9BVV7 248 aa11.81□□□□□ -0.52
EPHB4-206ENST00000487222 BPESC1Q9GZL8 116 aa11.81□□□□□ -0.52
EPHB4-206ENST00000487222 JPT2Q9H910 190 aa11.81□□□□□ -0.52
EPHB4-206ENST00000487222 INSP01308 110 aa11.81□□□□□ -0.52
EPHB4-206ENST00000487222 LINC00311Q8N616 119 aa11.81□□□□□ -0.52
EPHB4-206ENST00000487222 C1orf159Q96HA4 380 aa11.81□□□□□ -0.52
EPHB4-206ENST00000487222 HAPLN4Q86UW8 402 aa11.81□□□□□ -0.52
EPHB4-206ENST00000487222 C11orf52Q96A22 123 aa11.81□□□□□ -0.52
EPHB4-206ENST00000487222 WIPF3A6NGB9 483 aa11.81□□□□□ -0.52
EPHB4-206ENST00000487222 K7ENP7 123 aa11.81□□□□□ -0.52
EPHB4-206ENST00000487222 GATD1Q8NB37 220 aa11.81□□□□□ -0.52
EPHB4-206ENST00000487222 C15orf65H3BRN8 121 aa11.8□□□□□ -0.52
EPHB4-206ENST00000487222 Q6ZWC4 215 aa11.8□□□□□ -0.52
EPHB4-206ENST00000487222 ZNF503-AS2A6NEH8 195 aa11.8□□□□□ -0.52
EPHB4-206ENST00000487222 LGALS1P09382 135 aaKnown RBP11.8□□□□□ -0.52
EPHB4-206ENST00000487222 UBE2E1P51965 193 aa11.8□□□□□ -0.52
EPHB4-206ENST00000487222 IGFL3Q6UXB1 125 aa11.8□□□□□ -0.52
EPHB4-206ENST00000487222 KLF2Q9Y5W3 355 aaPredicted RBP11.8□□□□□ -0.52
EPHB4-206ENST00000487222 SMIM27A0A1W2PRY6 76 aa11.8□□□□□ -0.52
EPHB4-206ENST00000487222 SLAQ13239 276 aa11.8□□□□□ -0.52
EPHB4-206ENST00000487222 MED13LQ71F56 2210 aa11.8□□□□□ -0.52
EPHB4-206ENST00000487222 PLXNA4Q9HCM2 1894 aa11.79□□□□□ -0.52
EPHB4-206ENST00000487222 NSUN5P1Q3KNT7 163 aa11.79□□□□□ -0.52
EPHB4-206ENST00000487222 IL17RELQ6ZVW7 336 aa11.79□□□□□ -0.52
EPHB4-206ENST00000487222 TRPT1Q86TN4 253 aaKnown RBP11.79□□□□□ -0.52
EPHB4-206ENST00000487222 ZNF114Q8NC26 417 aa11.79□□□□□ -0.52
EPHB4-206ENST00000487222 TMEM14CQ9P0S9 112 aa11.79□□□□□ -0.52
EPHB4-206ENST00000487222 TICRRQ7Z2Z1 1910 aa11.79□□□□□ -0.52
EPHB4-206ENST00000487222 ATP6V0E1O15342 81 aa11.79□□□□□ -0.52
EPHB4-206ENST00000487222 Q8N8P6 123 aa11.79□□□□□ -0.52
EPHB4-206ENST00000487222 PHLDA1Q8WV24 401 aaPredicted RBP11.79□□□□□ -0.52
EPHB4-206ENST00000487222 C1QTNF4Q9BXJ3 329 aa11.79□□□□□ -0.52
EPHB4-206ENST00000487222 WT1-ASQ06250 92 aa11.79□□□□□ -0.52
EPHB4-206ENST00000487222 C8orf49Q96NF6 230 aa11.79□□□□□ -0.52
EPHB4-206ENST00000487222 GTSF1LQ9H1H1 148 aa11.79□□□□□ -0.52
EPHB4-206ENST00000487222 C11orf68Q9H3H3 251 aaKnown RBP11.79□□□□□ -0.52
EPHB4-206ENST00000487222 LOXP28300 417 aaPredicted RBP11.79□□□□□ -0.52
EPHB4-206ENST00000487222 SSBP2P81877 361 aaPredicted RBP11.79□□□□□ -0.52
EPHB4-206ENST00000487222 PLA2G2CQ5R387 149 aa11.79□□□□□ -0.52
EPHB4-206ENST00000487222 C2orf66Q6UXQ4 117 aa11.78□□□□□ -0.52
EPHB4-206ENST00000487222 ADAMTSL5Q6ZMM2 481 aa11.78□□□□□ -0.52
EPHB4-206ENST00000487222 SPXQ9BT56 116 aa11.78□□□□□ -0.52
EPHB4-206ENST00000487222 CST9LQ9H4G1 147 aa11.78□□□□□ -0.52
EPHB4-206ENST00000487222 ARFGEF3Q5TH69 2177 aa11.78□□□□□ -0.52
EPHB4-206ENST00000487222 NDUFS8O00217 210 aa11.78□□□□□ -0.52
EPHB4-206ENST00000487222 IGHV3-53P01767 116 aa11.78□□□□□ -0.52
EPHB4-206ENST00000487222 OCIAD2Q56VL3 154 aa11.78□□□□□ -0.52
EPHB4-206ENST00000487222 TEX36Q5VZQ5 186 aa11.78□□□□□ -0.52
EPHB4-206ENST00000487222 OVOL2Q9BRP0 275 aa11.78□□□□□ -0.52
EPHB4-206ENST00000487222 PRIMA1Q86XR5 153 aa11.78□□□□□ -0.52
EPHB4-206ENST00000487222 IGLV1-44P01699 117 aa11.77□□□□□ -0.52
EPHB4-206ENST00000487222 C6orf226Q5I0X4 101 aa11.77□□□□□ -0.52
EPHB4-206ENST00000487222 NEGR1Q7Z3B1 354 aa11.77□□□□□ -0.52
EPHB4-206ENST00000487222 PRR25Q96S07 402 aa11.77□□□□□ -0.52
EPHB4-206ENST00000487222 SHANK1Q9Y566 2161 aa11.77□□□□□ -0.53
EPHB4-206ENST00000487222 NOTCH4Q99466 2003 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms