RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 GOLT1AQ6ZVE7 132 aa4.7□□□□□ -1.66
VAMP3-203ENST00000487194 KLHL30-AS1Q8NEE0 82 aa4.7□□□□□ -1.66
VAMP3-203ENST00000487194 OR10G8Q8NGN5 311 aa4.7□□□□□ -1.66
VAMP3-203ENST00000487194 OR1N2Q8NGR9 330 aa4.7□□□□□ -1.66
VAMP3-203ENST00000487194 SFRP2Q96HF1 295 aa4.7□□□□□ -1.66
VAMP3-203ENST00000487194 BTF3L4Q96K17 158 aa4.7□□□□□ -1.66
VAMP3-203ENST00000487194 C16orf92Q96LL3 132 aa4.7□□□□□ -1.66
VAMP3-203ENST00000487194 LINC00479Q96M42 142 aa4.7□□□□□ -1.66
VAMP3-203ENST00000487194 IMMP2LQ96T52 175 aa4.7□□□□□ -1.66
VAMP3-203ENST00000487194 RHPN1-AS1Q9BWJ2 59 aa4.7□□□□□ -1.66
VAMP3-203ENST00000487194 OSTCQ9NRP0 149 aa4.7□□□□□ -1.66
VAMP3-203ENST00000487194 PEMTQ9UBM1 199 aa4.7□□□□□ -1.66
VAMP3-203ENST00000487194 ZFP30Q9Y2G7 519 aa4.7□□□□□ -1.66
VAMP3-203ENST00000487194 TSSC4Q9Y5U2 329 aaPredicted RBP4.7□□□□□ -1.66
VAMP3-203ENST00000487194 NSD1Q96L73 2696 aaPredicted RBP4.69□□□□□ -1.66
VAMP3-203ENST00000487194 TRAV34A0A0B4J273 112 aa4.69□□□□□ -1.66
VAMP3-203ENST00000487194 RBAKDNA6NC62 111 aa4.69□□□□□ -1.66
VAMP3-203ENST00000487194 PGPEP1LA6NFU8 196 aa4.69□□□□□ -1.66
VAMP3-203ENST00000487194 K7EN84 100 aa4.69□□□□□ -1.66
VAMP3-203ENST00000487194 ISLRO14498 428 aa4.69□□□□□ -1.66
VAMP3-203ENST00000487194 IGLV2-8P01709 118 aa4.69□□□□□ -1.66
VAMP3-203ENST00000487194 MGST1P10620 155 aaKnown RBP4.69□□□□□ -1.66
VAMP3-203ENST00000487194 SYNJ2BPP57105 145 aa4.69□□□□□ -1.66
VAMP3-203ENST00000487194 ERVFC1-1P60608 527 aa4.69□□□□□ -1.66
VAMP3-203ENST00000487194 FLI1Q01543 452 aaPredicted RBP4.69□□□□□ -1.66
VAMP3-203ENST00000487194 KLF5Q13887 457 aaPredicted RBP4.69□□□□□ -1.66
VAMP3-203ENST00000487194 TCTEX1D4Q5JR98 221 aa4.69□□□□□ -1.66
VAMP3-203ENST00000487194 SAPCD1Q5SSQ6 148 aa4.69□□□□□ -1.66
VAMP3-203ENST00000487194 LCN12Q6JVE5 192 aa4.69□□□□□ -1.66
VAMP3-203ENST00000487194 C8orf86Q6ZUL3 223 aa4.69□□□□□ -1.66
VAMP3-203ENST00000487194 FAM231DQ6ZW35 169 aa4.69□□□□□ -1.66
VAMP3-203ENST00000487194 Q71RC1 249 aaPredicted RBP4.69□□□□□ -1.66
VAMP3-203ENST00000487194 Q86TA4 180 aa4.69□□□□□ -1.66
VAMP3-203ENST00000487194 TMEM183AQ8IXX5 376 aa4.69□□□□□ -1.66
VAMP3-203ENST00000487194 OR11H1Q8NG94 326 aa4.69□□□□□ -1.66
VAMP3-203ENST00000487194 NRN1Q9NPD7 142 aa4.69□□□□□ -1.66
VAMP3-203ENST00000487194 MLXQ9UH92 298 aa4.69□□□□□ -1.66
VAMP3-203ENST00000487194 RNF114Q9Y508 228 aa4.69□□□□□ -1.66
VAMP3-203ENST00000487194 HIVEP1P15822 2718 aa4.69□□□□□ -1.66
VAMP3-203ENST00000487194 FN1P02751 2386 aaKnown RBP4.69□□□□□ -1.66
VAMP3-203ENST00000487194 TRBV24-1A0A075B6N3 115 aa4.68□□□□□ -1.66
VAMP3-203ENST00000487194 TRAV9-1A0A075B6T8 112 aa4.68□□□□□ -1.66
VAMP3-203ENST00000487194 TMEM213A2RRL7 107 aa4.68□□□□□ -1.66
VAMP3-203ENST00000487194 C2orf70A6NJV1 201 aa4.68□□□□□ -1.66
VAMP3-203ENST00000487194 COLCA2A8K830 154 aa4.68□□□□□ -1.66
VAMP3-203ENST00000487194 M0R3E3 92 aa4.68□□□□□ -1.66
VAMP3-203ENST00000487194 HAX1O00165 279 aa4.68□□□□□ -1.66
VAMP3-203ENST00000487194 IGLV2-11P01706 119 aa4.68□□□□□ -1.66
VAMP3-203ENST00000487194 CD28P10747 220 aa4.68□□□□□ -1.66
VAMP3-203ENST00000487194 ID1P41134 155 aa4.68□□□□□ -1.66
VAMP3-203ENST00000487194 PROK1P58294 105 aa4.68□□□□□ -1.66
VAMP3-203ENST00000487194 RPL11P62913 178 aaKnown RBP4.68□□□□□ -1.66
VAMP3-203ENST00000487194 RPL19P84098 196 aaKnown RBP4.68□□□□□ -1.66
VAMP3-203ENST00000487194 FOXL1Q12952 345 aa4.68□□□□□ -1.66
VAMP3-203ENST00000487194 OR5I1Q13606 314 aa4.68□□□□□ -1.66
VAMP3-203ENST00000487194 ELOBQ15370 118 aa4.68□□□□□ -1.66
VAMP3-203ENST00000487194 IBA57Q5T440 356 aaKnown RBP4.68□□□□□ -1.66
VAMP3-203ENST00000487194 TCF24Q7RTU0 167 aa4.68□□□□□ -1.66
VAMP3-203ENST00000487194 PRNTQ86SH4 94 aa4.68□□□□□ -1.66
VAMP3-203ENST00000487194 FAM24BQ8N5W8 94 aa4.68□□□□□ -1.66
VAMP3-203ENST00000487194 DAZAP1Q96EP5 407 aaKnown RBP4.68□□□□□ -1.66
VAMP3-203ENST00000487194 NDFIP1Q9BT67 221 aa4.68□□□□□ -1.66
VAMP3-203ENST00000487194 MLST8Q9BVC4 326 aa4.68□□□□□ -1.66
VAMP3-203ENST00000487194 AURKAIP1Q9NWT8 199 aaPredicted RBP4.68□□□□□ -1.66
VAMP3-203ENST00000487194 ZNF492Q9P255 531 aa4.68□□□□□ -1.66
VAMP3-203ENST00000487194 PSG8Q9UQ74 426 aa4.68□□□□□ -1.66
VAMP3-203ENST00000487194 TRAV8-1A0A0A6YYK1 113 aa4.67□□□□□ -1.66
VAMP3-203ENST00000487194 TRAV8-2A0A0B4J237 113 aa4.67□□□□□ -1.66
VAMP3-203ENST00000487194 ZNF705GA8MUZ8 300 aaPredicted RBP4.67□□□□□ -1.66
VAMP3-203ENST00000487194 SOCS3O14543 225 aa4.67□□□□□ -1.66
VAMP3-203ENST00000487194 OVOL1O14753 267 aa4.67□□□□□ -1.66
VAMP3-203ENST00000487194 GATCO43716 136 aaKnown RBP4.67□□□□□ -1.66
VAMP3-203ENST00000487194 PFN1P07737 140 aaKnown RBP4.67□□□□□ -1.66
VAMP3-203ENST00000487194 CT45A10P0DMU9 189 aa4.67□□□□□ -1.66
VAMP3-203ENST00000487194 FOLR2P14207 255 aa4.67□□□□□ -1.66
VAMP3-203ENST00000487194 RAB5AP20339 215 aa4.67□□□□□ -1.66
VAMP3-203ENST00000487194 CBLN1P23435 193 aa4.67□□□□□ -1.66
VAMP3-203ENST00000487194 SLURP1P55000 103 aa4.67□□□□□ -1.66
VAMP3-203ENST00000487194 PAFAH1B2P68402 229 aa4.67□□□□□ -1.66
VAMP3-203ENST00000487194 FHL3Q13643 280 aa4.67□□□□□ -1.66
VAMP3-203ENST00000487194 TMEM78Q5T7P6 136 aa4.67□□□□□ -1.66
VAMP3-203ENST00000487194 C18orf65Q6ZTR6 163 aa4.67□□□□□ -1.66
VAMP3-203ENST00000487194 GBGT1Q8N5D6 347 aa4.67□□□□□ -1.66
VAMP3-203ENST00000487194 NHLRC2Q8NBF2 726 aa4.67□□□□□ -1.66
VAMP3-203ENST00000487194 OR4B1Q8NGF8 309 aa4.67□□□□□ -1.66
VAMP3-203ENST00000487194 OR9G4Q8NGQ1 327 aa4.67□□□□□ -1.66
VAMP3-203ENST00000487194 SGK494Q96LW2 274 aa4.67□□□□□ -1.66
VAMP3-203ENST00000487194 YPEL4Q96NS1 127 aa4.67□□□□□ -1.66
VAMP3-203ENST00000487194 CITED2Q99967 270 aaPredicted RBP4.67□□□□□ -1.66
VAMP3-203ENST00000487194 IL36BQ9NZH7 164 aa4.67□□□□□ -1.66
VAMP3-203ENST00000487194 URGCP-MRPS24S4R325 110 aa4.67□□□□□ -1.66
VAMP3-203ENST00000487194 ATRQ13535 2644 aa4.66□□□□□ -1.66
VAMP3-203ENST00000487194 IGKV2-40A0A087WW87 121 aaPredicted RBP4.66□□□□□ -1.66
VAMP3-203ENST00000487194 TRAV2A0A0B4J234 112 aa4.66□□□□□ -1.66
VAMP3-203ENST00000487194 ZNF705FA8MVS1 300 aaPredicted RBP4.66□□□□□ -1.66
VAMP3-203ENST00000487194 CCL24O00175 119 aa4.66□□□□□ -1.66
VAMP3-203ENST00000487194 IGKV2D-40P01614 121 aaPredicted RBP4.66□□□□□ -1.66
VAMP3-203ENST00000487194 P01737 135 aa4.66□□□□□ -1.66
VAMP3-203ENST00000487194 HLA-DMBP28068 263 aa4.66□□□□□ -1.66
VAMP3-203ENST00000487194 SNRPD3P62318 126 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms