RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 TAAR3PQ9P1P4 343 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 MDFICQ9P1T7 246 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 CLCF1Q9UBD9 225 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 CKLFQ9UBR5 152 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 AK3Q9UIJ7 227 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 MPC1Q9Y5U8 109 aa4.18□□□□□ -1.74
SF1-217ENST00000486960 ALPK2Q86TB3 2170 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 ZNF407Q9C0G0 2248 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 TRBV7-6A0A0J9YX20 115 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 A0A1W2PRS3 328 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 TCRBV3S1A0A5B6 114 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 IRGMA1A4Y4 181 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 DPRXA6NFQ7 191 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 B4DEV8 164 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 G3V3Q6 166 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 CCDC179H3BU77 68 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 K7N7A8 449 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 NXPH4O95158 308 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 PMP2P02689 132 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 IGHV1-2P23083 117 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 AQP1P29972 269 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 CDKN2AP42771 156 aaKnown RBP4.17□□□□□ -1.74
SF1-217ENST00000486960 NDUFV3P56181 108 aaKnown RBP4.17□□□□□ -1.74
SF1-217ENST00000486960 SYNJ2BPP57105 145 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 GABARAPL2P60520 117 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 ZNF146Q15072 292 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 PEA15Q15121 130 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 ZNF705AQ6ZN79 300 aaPredicted RBP4.17□□□□□ -1.74
SF1-217ENST00000486960 SHISA6Q6ZSJ9 500 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 TRAPPC6BQ86SZ2 158 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 LINC00596Q86U02 117 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 MKXQ8IYA7 352 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 DRAM1Q8N682 238 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 OR2T10Q8NGZ9 312 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 SLC25A46Q96AG3 418 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 ST6GAL2Q96JF0 529 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 YPEL4Q96NS1 127 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 CCL13Q99616 98 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 SPIN2AQ99865 258 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 SPIN2BQ9BPZ2 258 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 TM2D3Q9BRN9 247 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 ADAT1Q9BUB4 502 aaKnown RBP4.17□□□□□ -1.74
SF1-217ENST00000486960 WDR61Q9GZS3 305 aaKnown RBP4.17□□□□□ -1.74
SF1-217ENST00000486960 OTORQ9NRC9 128 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 BET1LQ9NYM9 111 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 FLVCR1Q9Y5Y0 555 aa4.17□□□□□ -1.74
SF1-217ENST00000486960 KIAA1549Q9HCM3 1950 aa4.16□□□□□ -1.74
SF1-217ENST00000486960 IGHV1OR15-1A0A075B7D0 117 aa4.16□□□□□ -1.74
SF1-217ENST00000486960 IGKV3D-11A0A0A0MRZ8 115 aa4.16□□□□□ -1.74
SF1-217ENST00000486960 OR2T1O43869 369 aa4.16□□□□□ -1.74
SF1-217ENST00000486960 APOC3P02656 99 aa4.16□□□□□ -1.74
SF1-217ENST00000486960 CLPSP04118 112 aa4.16□□□□□ -1.74
SF1-217ENST00000486960 IFITM1P13164 125 aa4.16□□□□□ -1.74
SF1-217ENST00000486960 NFYBP25208 207 aa4.16□□□□□ -1.74
SF1-217ENST00000486960 IL2RGP31785 369 aa4.16□□□□□ -1.74
SF1-217ENST00000486960 TMEM258P61165 79 aa4.16□□□□□ -1.74
SF1-217ENST00000486960 IGLV3-21P80748 117 aaPredicted RBP4.16□□□□□ -1.74
SF1-217ENST00000486960 RBMY1FQ15415 496 aaKnown RBP4.16□□□□□ -1.74
SF1-217ENST00000486960 C1orf140Q5VVS0 124 aa4.16□□□□□ -1.74
SF1-217ENST00000486960 UNQ9165/PRO28630Q6UXU0 137 aa4.16□□□□□ -1.74
SF1-217ENST00000486960 LINC00173Q6ZV60 143 aa4.16□□□□□ -1.74
SF1-217ENST00000486960 RPRMLQ8N4K4 120 aa4.16□□□□□ -1.74
SF1-217ENST00000486960 OR10AC1Q8NH08 325 aa4.16□□□□□ -1.74
SF1-217ENST00000486960 OR4K13Q8NH42 304 aa4.16□□□□□ -1.74
SF1-217ENST00000486960 RAB2BQ8WUD1 216 aa4.16□□□□□ -1.74
SF1-217ENST00000486960 TSLPQ969D9 159 aa4.16□□□□□ -1.74
SF1-217ENST00000486960 ABHD14BQ96IU4 210 aa4.16□□□□□ -1.74
SF1-217ENST00000486960 HYLS1Q96M11 299 aa4.16□□□□□ -1.74
SF1-217ENST00000486960 CIB3Q96Q77 187 aaPredicted RBP4.16□□□□□ -1.74
SF1-217ENST00000486960 TMEM243Q9BU79 118 aa4.16□□□□□ -1.74
SF1-217ENST00000486960 VAMP8Q9BV40 100 aa4.16□□□□□ -1.74
SF1-217ENST00000486960 REG4Q9BYZ8 158 aa4.16□□□□□ -1.74
SF1-217ENST00000486960 BANF2Q9H503 90 aa4.16□□□□□ -1.74
SF1-217ENST00000486960 FKBP11Q9NYL4 201 aa4.16□□□□□ -1.74
SF1-217ENST00000486960 PYGO1Q9Y3Y4 419 aa4.16□□□□□ -1.74
SF1-217ENST00000486960 ARHGAP21Q5T5U3 1957 aa4.16□□□□□ -1.74
SF1-217ENST00000486960 ALMS1Q8TCU4 4167 aa4.15□□□□□ -1.75
SF1-217ENST00000486960 TRBV20OR9-2A0A075B6H5 130 aa4.15□□□□□ -1.75
SF1-217ENST00000486960 IGLV3-12A0A075B6K2 115 aa4.15□□□□□ -1.75
SF1-217ENST00000486960 TRAV27A0A087WT01 109 aa4.15□□□□□ -1.75
SF1-217ENST00000486960 IGHV3-38A0A0C4DH36 116 aa4.15□□□□□ -1.75
SF1-217ENST00000486960 HLA-DQB1P01920 261 aa4.15□□□□□ -1.75
SF1-217ENST00000486960 ZNF138P52744 262 aa4.15□□□□□ -1.75
SF1-217ENST00000486960 FUT5Q11128 374 aa4.15□□□□□ -1.75
SF1-217ENST00000486960 KIAA0087Q14695 138 aa4.15□□□□□ -1.75
SF1-217ENST00000486960 WDR38Q5JTN6 314 aa4.15□□□□□ -1.75
SF1-217ENST00000486960 ZNF880Q6PDB4 577 aa4.15□□□□□ -1.75
SF1-217ENST00000486960 MORN3Q6PF18 240 aaPredicted RBP4.15□□□□□ -1.75
SF1-217ENST00000486960 AMTNQ6UX39 209 aa4.15□□□□□ -1.75
SF1-217ENST00000486960 PRNTQ86SH4 94 aa4.15□□□□□ -1.75
SF1-217ENST00000486960 RPS19BP1Q86WX3 136 aaKnown RBP4.15□□□□□ -1.75
SF1-217ENST00000486960 BRK1Q8WUW1 75 aa4.15□□□□□ -1.75
SF1-217ENST00000486960 MAL2Q969L2 176 aa4.15□□□□□ -1.75
SF1-217ENST00000486960 TOMM6Q96B49 74 aa4.15□□□□□ -1.75
SF1-217ENST00000486960 LYZL4Q96KX0 146 aa4.15□□□□□ -1.75
SF1-217ENST00000486960 ERMAPQ96PL5 475 aaPredicted RBP4.15□□□□□ -1.75
SF1-217ENST00000486960 KRTAP4-5Q9BYR2 181 aa4.15□□□□□ -1.75
SF1-217ENST00000486960 ZNF443Q9Y2A4 671 aaPredicted RBP4.15□□□□□ -1.75
SF1-217ENST00000486960 NUP214P35658 2090 aaPredicted RBP4.15□□□□□ -1.75
SF1-217ENST00000486960 PKHD1P08F94 4074 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms