RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 SURF2Q15527 256 aaPredicted RBP2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 NMSQ5H8A3 153 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 FAM78BQ5VT40 261 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 EBLN2Q6P2I7 272 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 KRTAP11-1Q8IUC1 163 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 LGI3Q8N145 548 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 C6orf223Q8N319 242 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 TMEM229BQ8NBD8 167 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 OR4D10Q8NGI6 311 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 OR13C8Q8NGS7 320 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 ZNRF2Q8NHG8 242 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 COQ8AQ8NI60 647 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 LHFPL5Q8TAF8 219 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 MARCH1Q8TCQ1 289 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 ACY3Q96HD9 319 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 IGF2BP2-AS1Q96M15 143 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 LINC00052Q96N35 136 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 ATG101Q9BSB4 218 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 RTBDNQ9BSG5 229 aaPredicted RBP2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 MAGT1Q9H0U3 335 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 SLC35B3Q9H1N7 401 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 NAA60Q9H7X0 242 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 VCX3AQ9NNX9 186 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 RPRMQ9NS64 109 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 GPR132Q9UNW8 380 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 C14orf166Q9Y224 244 aaKnown RBP2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 TMEM56-RWDD3S4R434 201 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 DMBT1Q9UGM3 2413 aaPredicted RBP2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 HSPG2P98160 4391 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 IGKV1D-37A0A075B6S9 117 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 A0A087WXM4 84 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 A0A1B0GVG6 124 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 CRYM-AS1A6NIL9 109 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 ZFP92A6NM28 416 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 LYRM9A8MSI8 78 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 FAM25AB3EWG3 89 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 FAM25CB3EWG5 89 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 FAM25GB3EWG6 89 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 F6UB75 175 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 GABARAPH6UMI1 98 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 DUSP14O95147 198 aaKnown RBP2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 GABARAPO95166 117 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 CFDP00746 253 aaPredicted RBP2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 SULT1A3P0DMM9 295 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 SULT1A4P0DMN0 295 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 TSPOP30536 169 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 MEOX2P50222 304 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 CCR6P51684 374 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 CCL18P55774 89 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 VBP1P61758 197 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 NCS1P62166 190 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 ZNF90Q03938 601 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 GAMTQ14353 236 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 MEF2DQ14814 521 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 SCGB2B2Q4G0G5 96 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 GPR107Q5VW38 600 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 STEAP1BQ6NZ63 245 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 AMTNQ6UX39 209 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 GPR141Q7Z602 305 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 OR8I2Q8N0Y5 310 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 OR4D5Q8NGN0 318 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 DTD1Q8TEA8 209 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 AP3S1Q92572 193 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 IL22RA2Q969J5 263 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 PPP1R14BQ96C90 147 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 TMEM208Q9BTX3 173 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 PBDC1Q9BVG4 233 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 FUNDC2Q9BWH2 189 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 DOK5Q9P104 306 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 EXTL2Q9UBQ6 330 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 KCNIP3Q9Y2W7 256 aa2.73□□□□□ -1.97
SNRNP40-205ENST00000486941 A0A0B4J2A0 478 aa2.72□□□□□ -1.97
SNRNP40-205ENST00000486941 PIGBOS1A0A0B4J2F0 54 aa2.72□□□□□ -1.97
SNRNP40-205ENST00000486941 ZNF98A6NK75 572 aa2.72□□□□□ -1.97
SNRNP40-205ENST00000486941 ZNF705GA8MUZ8 300 aaPredicted RBP2.72□□□□□ -1.97
SNRNP40-205ENST00000486941 DISC1C4P0D8 188 aa2.72□□□□□ -1.97
SNRNP40-205ENST00000486941 F5H768 121 aa2.72□□□□□ -1.97
SNRNP40-205ENST00000486941 CRXO43186 299 aaPredicted RBP2.72□□□□□ -1.97
SNRNP40-205ENST00000486941 INSP01308 110 aa2.72□□□□□ -1.97
SNRNP40-205ENST00000486941 ATP5G1P05496 136 aa2.72□□□□□ -1.97
SNRNP40-205ENST00000486941 DEFB130BP0DP73 79 aa2.72□□□□□ -1.97
SNRNP40-205ENST00000486941 DEFB130AP0DP74 79 aa2.72□□□□□ -1.97
SNRNP40-205ENST00000486941 S100A7P31151 101 aa2.72□□□□□ -1.97
SNRNP40-205ENST00000486941 GALR1P47211 349 aa2.72□□□□□ -1.97
SNRNP40-205ENST00000486941 ATP5G3P48201 142 aa2.72□□□□□ -1.97
SNRNP40-205ENST00000486941 LYZP61626 148 aa2.72□□□□□ -1.97
SNRNP40-205ENST00000486941 RAB11AP62491 216 aa2.72□□□□□ -1.97
SNRNP40-205ENST00000486941 MRPS10P82664 201 aaKnown RBP2.72□□□□□ -1.97
SNRNP40-205ENST00000486941 OR2F1Q13607 317 aa2.72□□□□□ -1.97
SNRNP40-205ENST00000486941 SMCO1Q147U7 214 aa2.72□□□□□ -1.97
SNRNP40-205ENST00000486941 TMEM256Q8N2U0 113 aa2.72□□□□□ -1.97
SNRNP40-205ENST00000486941 THAP8Q8NA92 274 aa2.72□□□□□ -1.97
SNRNP40-205ENST00000486941 OR11H7Q8NGC8 314 aa2.72□□□□□ -1.97
SNRNP40-205ENST00000486941 OR1B1Q8NGR6 318 aa2.72□□□□□ -1.97
SNRNP40-205ENST00000486941 SLC35E1Q96K37 410 aa2.72□□□□□ -1.97
SNRNP40-205ENST00000486941 GPR82Q96P67 336 aa2.72□□□□□ -1.97
SNRNP40-205ENST00000486941 SCGB3A2Q96PL1 93 aa2.72□□□□□ -1.97
SNRNP40-205ENST00000486941 TRGV9Q99603 122 aa2.72□□□□□ -1.97
SNRNP40-205ENST00000486941 PRRT1Q99946 306 aa2.72□□□□□ -1.97
SNRNP40-205ENST00000486941 RSG1Q9BU20 258 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms