RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 NCR2O95944 276 aa10.5□□□□□ -0.73
HMGN1-216ENST00000486741 FRMD6-AS1P0C7T7 363 aa10.5□□□□□ -0.73
HMGN1-216ENST00000486741 EBLN2Q6P2I7 272 aa10.5□□□□□ -0.73
HMGN1-216ENST00000486741 C12orf54Q6X4T0 127 aa10.5□□□□□ -0.73
HMGN1-216ENST00000486741 NDUFS8O00217 210 aa10.49□□□□□ -0.73
HMGN1-216ENST00000486741 TOMM40O96008 361 aa10.49□□□□□ -0.73
HMGN1-216ENST00000486741 IGLV2-23P01705 113 aa10.49□□□□□ -0.73
HMGN1-216ENST00000486741 TMEM70Q9BUB7 260 aa10.49□□□□□ -0.73
HMGN1-216ENST00000486741 MEGF9Q9H1U4 602 aa10.49□□□□□ -0.73
HMGN1-216ENST00000486741 ZNF462Q96JM2 2506 aa10.49□□□□□ -0.73
HMGN1-216ENST00000486741 A6NDN8 102 aa10.49□□□□□ -0.73
HMGN1-216ENST00000486741 Q8N7P7 452 aa10.49□□□□□ -0.73
HMGN1-216ENST00000486741 OR10AG1Q8NH19 301 aa10.49□□□□□ -0.73
HMGN1-216ENST00000486741 A0A1W2PRX2 142 aa10.49□□□□□ -0.73
HMGN1-216ENST00000486741 RNASE4P34096 147 aaKnown RBP10.49□□□□□ -0.73
HMGN1-216ENST00000486741 LY96Q9Y6Y9 160 aa10.49□□□□□ -0.73
HMGN1-216ENST00000486741 ZNF292O60281 2723 aa10.49□□□□□ -0.73
HMGN1-216ENST00000486741 A0A0G2JLM5 398 aa10.48□□□□□ -0.73
HMGN1-216ENST00000486741 A0A1B0GV72 72 aa10.48□□□□□ -0.73
HMGN1-216ENST00000486741 F2Z2F3 143 aa10.48□□□□□ -0.73
HMGN1-216ENST00000486741 EVI2AP22794 236 aa10.48□□□□□ -0.73
HMGN1-216ENST00000486741 PRDM13Q9H4Q3 707 aa10.48□□□□□ -0.73
HMGN1-216ENST00000486741 PCSK5Q92824 1860 aa10.48□□□□□ -0.73
HMGN1-216ENST00000486741 HLA-DMBP28068 263 aa10.48□□□□□ -0.73
HMGN1-216ENST00000486741 SLC25A34Q6PIV7 304 aa10.48□□□□□ -0.73
HMGN1-216ENST00000486741 LYZL1Q6UWQ5 148 aa10.48□□□□□ -0.73
HMGN1-216ENST00000486741 Q86TA4 180 aa10.48□□□□□ -0.73
HMGN1-216ENST00000486741 MAP1LC3AQ9H492 121 aa10.48□□□□□ -0.73
HMGN1-216ENST00000486741 RPS20P60866 119 aaKnown RBP10.48□□□□□ -0.73
HMGN1-216ENST00000486741 C8orf49Q96NF6 230 aa10.48□□□□□ -0.73
HMGN1-216ENST00000486741 OR4C46A6NHA9 309 aa10.47□□□□□ -0.73
HMGN1-216ENST00000486741 B4DSR2 109 aa10.47□□□□□ -0.73
HMGN1-216ENST00000486741 RNF223E7ERA6 249 aa10.47□□□□□ -0.73
HMGN1-216ENST00000486741 C1orf194Q5T5A4 169 aa10.47□□□□□ -0.73
HMGN1-216ENST00000486741 JKAMPQ9P055 326 aa10.47□□□□□ -0.73
HMGN1-216ENST00000486741 IGKV1-17P01599 117 aa10.47□□□□□ -0.73
HMGN1-216ENST00000486741 ARMS2P0C7Q2 107 aa10.47□□□□□ -0.73
HMGN1-216ENST00000486741 SLAQ13239 276 aa10.47□□□□□ -0.73
HMGN1-216ENST00000486741 PSG3Q16557 428 aa10.47□□□□□ -0.73
HMGN1-216ENST00000486741 ZNF491Q8N8L2 437 aa10.47□□□□□ -0.73
HMGN1-216ENST00000486741 THAP8Q8NA92 274 aa10.47□□□□□ -0.73
HMGN1-216ENST00000486741 MYOZ3Q8TDC0 251 aa10.47□□□□□ -0.73
HMGN1-216ENST00000486741 C11orf52Q96A22 123 aa10.47□□□□□ -0.73
HMGN1-216ENST00000486741 TRBV19A0A075B6N1 114 aa10.47□□□□□ -0.73
HMGN1-216ENST00000486741 IGHV4-61A0A0C4DH41 118 aa10.47□□□□□ -0.73
HMGN1-216ENST00000486741 NPFFR1Q9GZQ6 430 aa10.47□□□□□ -0.73
HMGN1-216ENST00000486741 CENPEQ02224 2701 aa10.46□□□□□ -0.73
HMGN1-216ENST00000486741 JMJD1CQ15652 2540 aa10.46□□□□□ -0.73
HMGN1-216ENST00000486741 USP34Q70CQ2 3546 aa10.46□□□□□ -0.74
HMGN1-216ENST00000486741 SMKR1H3BMG3 65 aa10.46□□□□□ -0.74
HMGN1-216ENST00000486741 HOXB4P17483 251 aaPredicted RBP10.46□□□□□ -0.74
HMGN1-216ENST00000486741 SIGLEC15Q6ZMC9 328 aa10.46□□□□□ -0.74
HMGN1-216ENST00000486741 ORMDL3Q8N138 153 aa10.46□□□□□ -0.74
HMGN1-216ENST00000486741 MTORP42345 2549 aa10.46□□□□□ -0.74
HMGN1-216ENST00000486741 BOD1L1Q8NFC6 3051 aa10.46□□□□□ -0.74
HMGN1-216ENST00000486741 SAMD13Q5VXD3 122 aa10.46□□□□□ -0.74
HMGN1-216ENST00000486741 FAM159AQ6UWV7 190 aa10.46□□□□□ -0.74
HMGN1-216ENST00000486741 OR4X2Q8NGF9 303 aa10.46□□□□□ -0.74
HMGN1-216ENST00000486741 ITLN2Q8WWU7 325 aaPredicted RBP10.46□□□□□ -0.74
HMGN1-216ENST00000486741 FAM167A-AS1Q96KT0 104 aa10.46□□□□□ -0.74
HMGN1-216ENST00000486741 C19orf84I3L1E1 186 aa10.45□□□□□ -0.74
HMGN1-216ENST00000486741 SH2D1AO60880 128 aa10.45□□□□□ -0.74
HMGN1-216ENST00000486741 MSMBP08118 114 aa10.45□□□□□ -0.74
HMGN1-216ENST00000486741 SCGB1C2P0DMR2 95 aa10.45□□□□□ -0.74
HMGN1-216ENST00000486741 SMAGPQ0VAQ4 97 aa10.45□□□□□ -0.74
HMGN1-216ENST00000486741 NACAE9PAV3 2078 aa10.45□□□□□ -0.74
HMGN1-216ENST00000486741 C8orf31Q8N9H6 132 aa10.45□□□□□ -0.74
HMGN1-216ENST00000486741 IGHV1-69DA0A0B4J2H0 117 aa10.45□□□□□ -0.74
HMGN1-216ENST00000486741 K7EIM0 57 aa10.45□□□□□ -0.74
HMGN1-216ENST00000486741 OVOL3O00110 214 aa10.45□□□□□ -0.74
HMGN1-216ENST00000486741 IGHV1-69P01742 117 aa10.45□□□□□ -0.74
HMGN1-216ENST00000486741 SP5Q6BEB4 398 aaPredicted RBP10.45□□□□□ -0.74
HMGN1-216ENST00000486741 C7orf71A4D174 169 aa10.44□□□□□ -0.74
HMGN1-216ENST00000486741 OR11H6Q8NGC7 330 aa10.44□□□□□ -0.74
HMGN1-216ENST00000486741 SLC50A1Q9BRV3 221 aa10.44□□□□□ -0.74
HMGN1-216ENST00000486741 D6R8Y8 96 aa10.44□□□□□ -0.74
HMGN1-216ENST00000486741 H3BVH4 76 aa10.44□□□□□ -0.74
HMGN1-216ENST00000486741 IGHV4-39P01824 125 aa10.44□□□□□ -0.74
HMGN1-216ENST00000486741 AMN1Q8IY45 258 aa10.44□□□□□ -0.74
HMGN1-216ENST00000486741 TMEM213A2RRL7 107 aa10.44□□□□□ -0.74
HMGN1-216ENST00000486741 NUPR1O60356 82 aa10.44□□□□□ -0.74
HMGN1-216ENST00000486741 TYMSP04818 313 aa10.44□□□□□ -0.74
HMGN1-216ENST00000486741 C3orf79P0CE67 100 aa10.44□□□□□ -0.74
HMGN1-216ENST00000486741 FABP2P12104 132 aa10.44□□□□□ -0.74
HMGN1-216ENST00000486741 HIVEP2P31629 2446 aa10.44□□□□□ -0.74
HMGN1-216ENST00000486741 ZNF688P0C7X2 276 aa10.44□□□□□ -0.74
HMGN1-216ENST00000486741 TMEM75Q8N9X5 138 aa10.44□□□□□ -0.74
HMGN1-216ENST00000486741 ZNF503Q96F45 646 aa10.44□□□□□ -0.74
HMGN1-216ENST00000486741 SOX21Q9Y651 276 aaPredicted RBP10.44□□□□□ -0.74
HMGN1-216ENST00000486741 TEX22C9J3V5 150 aa10.43□□□□□ -0.74
HMGN1-216ENST00000486741 OR10J3Q5JRS4 329 aa10.43□□□□□ -0.74
HMGN1-216ENST00000486741 FRYQ5TBA9 3013 aa10.43□□□□□ -0.74
HMGN1-216ENST00000486741 I3L2K1 104 aa10.43□□□□□ -0.74
HMGN1-216ENST00000486741 SNRPD3P62318 126 aaKnown RBP10.43□□□□□ -0.74
HMGN1-216ENST00000486741 NAA38Q9BRA0 125 aaKnown RBP10.43□□□□□ -0.74
HMGN1-216ENST00000486741 BEX4Q9NWD9 120 aaPredicted RBP10.43□□□□□ -0.74
HMGN1-216ENST00000486741 PEF1Q9UBV8 284 aaKnown RBP10.43□□□□□ -0.74
HMGN1-216ENST00000486741 PRSS46E5RG02 174 aa10.43□□□□□ -0.74
HMGN1-216ENST00000486741 GCSHP23434 173 aa10.43□□□□□ -0.74
HMGN1-216ENST00000486741 YPEL3P61236 119 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms