RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 BAALC-AS2P0C853 105 aa7.1□□□□□ -1.27
GABRE-209ENST00000486255 BAALCQ8WXS3 180 aa7.1□□□□□ -1.27
GABRE-209ENST00000486255 ORMDL1Q9P0S3 153 aa7.1□□□□□ -1.27
GABRE-209ENST00000486255 MSRB2Q9Y3D2 182 aa7.1□□□□□ -1.27
GABRE-209ENST00000486255 HELZP42694 1942 aaKnown RBP7.1□□□□□ -1.27
GABRE-209ENST00000486255 TRAV26-2A0A0B4J265 109 aa7.1□□□□□ -1.27
GABRE-209ENST00000486255 IGKV1-12A0A0C4DH73 117 aa7.1□□□□□ -1.27
GABRE-209ENST00000486255 IGLC7A0M8Q6 106 aa7.1□□□□□ -1.27
GABRE-209ENST00000486255 IGKV1D-12P01611 117 aa7.1□□□□□ -1.27
GABRE-209ENST00000486255 NDUFA12Q9UI09 145 aa7.1□□□□□ -1.27
GABRE-209ENST00000486255 ARID1AO14497 2285 aa7.1□□□□□ -1.27
GABRE-209ENST00000486255 MAP1BP46821 2468 aaKnown RBP7.1□□□□□ -1.27
GABRE-209ENST00000486255 ASCC3Q8N3C0 2202 aaKnown RBP7.1□□□□□ -1.27
GABRE-209ENST00000486255 TGFBR3LH3BV60 316 aa7.1□□□□□ -1.27
GABRE-209ENST00000486255 DKK1O94907 266 aa7.1□□□□□ -1.27
GABRE-209ENST00000486255 LINC00479Q96M42 142 aa7.1□□□□□ -1.27
GABRE-209ENST00000486255 METRNQ9UJH8 293 aa7.1□□□□□ -1.27
GABRE-209ENST00000486255 F6UB75 175 aa7.09□□□□□ -1.27
GABRE-209ENST00000486255 IGHV1-46P01743 117 aa7.09□□□□□ -1.27
GABRE-209ENST00000486255 FLVCR1-AS1Q8TAF5 88 aa7.09□□□□□ -1.27
GABRE-209ENST00000486255 BRK1Q8WUW1 75 aa7.09□□□□□ -1.27
GABRE-209ENST00000486255 RNF5Q99942 180 aa7.09□□□□□ -1.27
GABRE-209ENST00000486255 WIPF3A6NGB9 483 aa7.09□□□□□ -1.27
GABRE-209ENST00000486255 ATOX1O00244 68 aa7.09□□□□□ -1.27
GABRE-209ENST00000486255 NPYP01303 97 aa7.09□□□□□ -1.27
GABRE-209ENST00000486255 PFN1P07737 140 aaKnown RBP7.09□□□□□ -1.27
GABRE-209ENST00000486255 IGHV1-8P0DP01 117 aa7.09□□□□□ -1.27
GABRE-209ENST00000486255 FOXF2Q12947 444 aa7.09□□□□□ -1.27
GABRE-209ENST00000486255 C11orf44Q8N8P7 122 aa7.09□□□□□ -1.27
GABRE-209ENST00000486255 SHANK2-AS3Q9BTD1 123 aa7.09□□□□□ -1.27
GABRE-209ENST00000486255 A0A0B4J2C4 111 aa7.09□□□□□ -1.27
GABRE-209ENST00000486255 NXPH4O95158 308 aa7.09□□□□□ -1.27
GABRE-209ENST00000486255 TMEM219Q86XT9 240 aa7.09□□□□□ -1.27
GABRE-209ENST00000486255 MYLKQ15746 1914 aa7.09□□□□□ -1.27
GABRE-209ENST00000486255 ANAPC1Q9H1A4 1944 aa7.09□□□□□ -1.27
GABRE-209ENST00000486255 AMTNQ6UX39 209 aa7.09□□□□□ -1.28
GABRE-209ENST00000486255 RP1L1Q8IWN7 2480 aaPredicted RBP7.09□□□□□ -1.28
GABRE-209ENST00000486255 IGKV1-27A0A075B6S5 117 aa7.08□□□□□ -1.28
GABRE-209ENST00000486255 LYNX1G3V0Z9 82 aa7.08□□□□□ -1.28
GABRE-209ENST00000486255 LYNX1P0DP58 116 aa7.08□□□□□ -1.28
GABRE-209ENST00000486255 MRPL14Q6P1L8 145 aaKnown RBP7.08□□□□□ -1.28
GABRE-209ENST00000486255 HS3ST6Q96QI5 342 aa7.08□□□□□ -1.28
GABRE-209ENST00000486255 IGHV2-5P01817 119 aa7.08□□□□□ -1.28
GABRE-209ENST00000486255 KLF5Q13887 457 aaPredicted RBP7.08□□□□□ -1.28
GABRE-209ENST00000486255 CD177Q8N6Q3 437 aa7.08□□□□□ -1.28
GABRE-209ENST00000486255 MESP1Q9BRJ9 268 aa7.08□□□□□ -1.28
GABRE-209ENST00000486255 SMIM2Q9BVW6 85 aa7.08□□□□□ -1.28
GABRE-209ENST00000486255 SIGLEC8Q9NYZ4 499 aa7.08□□□□□ -1.28
GABRE-209ENST00000486255 PLXNA2O75051 1894 aa7.08□□□□□ -1.28
GABRE-209ENST00000486255 IGHV3-16A0A0C4DH30 117 aa7.08□□□□□ -1.28
GABRE-209ENST00000486255 C9JQL5 133 aa7.08□□□□□ -1.28
GABRE-209ENST00000486255 CCL25O15444 150 aa7.08□□□□□ -1.28
GABRE-209ENST00000486255 A0A1B0GX51 115 aa7.08□□□□□ -1.28
GABRE-209ENST00000486255 RNASE2P10153 161 aaKnown RBP7.08□□□□□ -1.28
GABRE-209ENST00000486255 SP5Q6BEB4 398 aaPredicted RBP7.08□□□□□ -1.28
GABRE-209ENST00000486255 M0R1W7 72 aa7.07□□□□□ -1.28
GABRE-209ENST00000486255 ZNF883P0CG24 379 aa7.07□□□□□ -1.28
GABRE-209ENST00000486255 CRYGSP22914 178 aa7.07□□□□□ -1.28
GABRE-209ENST00000486255 PSMB8P28062 276 aa7.07□□□□□ -1.28
GABRE-209ENST00000486255 PDE6HQ13956 83 aa7.07□□□□□ -1.28
GABRE-209ENST00000486255 USMG5Q96IX5 58 aa7.07□□□□□ -1.28
GABRE-209ENST00000486255 MRPL35Q9NZE8 188 aaKnown RBP7.07□□□□□ -1.28
GABRE-209ENST00000486255 LINC00473A8K010 186 aa7.07□□□□□ -1.28
GABRE-209ENST00000486255 CRYGCP07315 174 aa7.07□□□□□ -1.28
GABRE-209ENST00000486255 V9GYV3 84 aa7.07□□□□□ -1.28
GABRE-209ENST00000486255 CFHR3Q02985 330 aa7.07□□□□□ -1.28
GABRE-209ENST00000486255 MINOS1Q5TGZ0 78 aa7.07□□□□□ -1.28
GABRE-209ENST00000486255 DEFB105AQ8NG35 78 aa7.07□□□□□ -1.28
GABRE-209ENST00000486255 MINOS1-NBL1R4GNA1 71 aa7.07□□□□□ -1.28
GABRE-209ENST00000486255 TRAV12-2A0A075B6T6 113 aa7.07□□□□□ -1.28
GABRE-209ENST00000486255 CFPP27918 469 aa7.07□□□□□ -1.28
GABRE-209ENST00000486255 RNASE6Q93091 150 aaKnown RBP7.07□□□□□ -1.28
GABRE-209ENST00000486255 CYYR1Q96J86 154 aa7.07□□□□□ -1.28
GABRE-209ENST00000486255 KIAA1671Q9BY89 1806 aa7.07□□□□□ -1.28
GABRE-209ENST00000486255 J3QQQ9 107 aa7.07□□□□□ -1.28
GABRE-209ENST00000486255 RHODO00212 210 aa7.07□□□□□ -1.28
GABRE-209ENST00000486255 C10orf91Q5T1B1 145 aa7.07□□□□□ -1.28
GABRE-209ENST00000486255 BUB1B-PAK6H3BSN5 160 aa7.06□□□□□ -1.28
GABRE-209ENST00000486255 NTN3O00634 580 aaPredicted RBP7.06□□□□□ -1.28
GABRE-209ENST00000486255 CFC1BP0CG36 223 aa7.06□□□□□ -1.28
GABRE-209ENST00000486255 CFC1P0CG37 223 aa7.06□□□□□ -1.28
GABRE-209ENST00000486255 HERVK_113P63121 156 aa7.06□□□□□ -1.28
GABRE-209ENST00000486255 MRPL23Q16540 153 aaKnown RBP7.06□□□□□ -1.28
GABRE-209ENST00000486255 ZCCHC24Q8N2G6 241 aaKnown RBP7.06□□□□□ -1.28
GABRE-209ENST00000486255 NDUFS7O75251 213 aa7.06□□□□□ -1.28
GABRE-209ENST00000486255 RHPN1-AS1Q9BWJ2 59 aa7.06□□□□□ -1.28
GABRE-209ENST00000486255 KLK9Q9UKQ9 250 aa7.06□□□□□ -1.28
GABRE-209ENST00000486255 KNL1Q8NG31 2342 aa7.06□□□□□ -1.28
GABRE-209ENST00000486255 DOCK6Q96HP0 2047 aa7.06□□□□□ -1.28
GABRE-209ENST00000486255 TRBV6-6A0A0A6YYG2 114 aa7.06□□□□□ -1.28
GABRE-209ENST00000486255 IGHV3-38A0A0C4DH36 116 aa7.06□□□□□ -1.28
GABRE-209ENST00000486255 FAM236AA0A1B0GUQ0 79 aa7.06□□□□□ -1.28
GABRE-209ENST00000486255 FAM236BA0A1B0GV22 79 aa7.06□□□□□ -1.28
GABRE-209ENST00000486255 YPEL3P61236 119 aaPredicted RBP7.06□□□□□ -1.28
GABRE-209ENST00000486255 VWC2Q2TAL6 325 aa7.06□□□□□ -1.28
GABRE-209ENST00000486255 DKK2Q9UBU2 259 aa7.06□□□□□ -1.28
GABRE-209ENST00000486255 A0A0G2JRQ6 117 aa7.06□□□□□ -1.28
GABRE-209ENST00000486255 DEFB130BP0DP73 79 aa7.06□□□□□ -1.28
GABRE-209ENST00000486255 DEFB130AP0DP74 79 aa7.06□□□□□ -1.28
GABRE-209ENST00000486255 VOPP1Q96AW1 172 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms