RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 PARD6GQ9BYG4 376 aaPredicted RBP12.62□□□□□ -0.39
COL6A1-204ENST00000486023 BLNKQ8WV28 456 aa12.61□□□□□ -0.39
COL6A1-204ENST00000486023 ZNF586Q9NXT0 402 aa12.61□□□□□ -0.39
COL6A1-204ENST00000486023 MPDU1O75352 247 aa12.6□□□□□ -0.39
COL6A1-204ENST00000486023 PYYP10082 97 aa12.6□□□□□ -0.39
COL6A1-204ENST00000486023 AZU1P20160 251 aa12.6□□□□□ -0.39
COL6A1-204ENST00000486023 SAT2Q96F10 170 aaPredicted RBP12.6□□□□□ -0.39
COL6A1-204ENST00000486023 RNF126Q9BV68 326 aa12.6□□□□□ -0.39
COL6A1-204ENST00000486023 SMIM3Q9BZL3 60 aa12.6□□□□□ -0.39
COL6A1-204ENST00000486023 TIMM9Q9Y5J7 89 aa12.6□□□□□ -0.39
COL6A1-204ENST00000486023 DAD1P61803 113 aa12.59□□□□□ -0.39
COL6A1-204ENST00000486023 KIR3DS1Q14943 382 aa12.59□□□□□ -0.39
COL6A1-204ENST00000486023 FCN2Q15485 313 aa12.59□□□□□ -0.39
COL6A1-204ENST00000486023 GUK1Q16774 197 aa12.59□□□□□ -0.39
COL6A1-204ENST00000486023 NDUFAF3Q9BU61 184 aa12.59□□□□□ -0.39
COL6A1-204ENST00000486023 MPC2O95563 127 aa12.58□□□□□ -0.4
COL6A1-204ENST00000486023 DEFB130BP0DP73 79 aa12.58□□□□□ -0.4
COL6A1-204ENST00000486023 DEFB130AP0DP74 79 aa12.58□□□□□ -0.4
COL6A1-204ENST00000486023 CDKN1BP46527 198 aa12.58□□□□□ -0.4
COL6A1-204ENST00000486023 MIR17HGQ75NE6 70 aa12.58□□□□□ -0.4
COL6A1-204ENST00000486023 CHAC2Q8WUX2 184 aa12.58□□□□□ -0.4
COL6A1-204ENST00000486023 WDR61Q9GZS3 305 aaKnown RBP12.58□□□□□ -0.4
COL6A1-204ENST00000486023 TEX48A0A1B0GUV7 120 aa12.57□□□□□ -0.4
COL6A1-204ENST00000486023 KMT2AQ03164 3969 aa12.56□□□□□ -0.4
COL6A1-204ENST00000486023 TRBV19A0A075B6N1 114 aa12.56□□□□□ -0.4
COL6A1-204ENST00000486023 C17orf112F2Z3M2 114 aa12.56□□□□□ -0.4
COL6A1-204ENST00000486023 M0R3E3 92 aa12.56□□□□□ -0.4
COL6A1-204ENST00000486023 PET100P0DJ07 73 aa12.56□□□□□ -0.4
COL6A1-204ENST00000486023 HIST1H1EP10412 219 aaKnown RBP12.56□□□□□ -0.4
COL6A1-204ENST00000486023 EXOC3-AS1Q8N2X6 119 aa12.56□□□□□ -0.4
COL6A1-204ENST00000486023 SCGB1C1Q8TD33 95 aa12.56□□□□□ -0.4
COL6A1-204ENST00000486023 MBD2Q9UBB5 411 aa12.56□□□□□ -0.4
COL6A1-204ENST00000486023 ALG5Q9Y673 324 aa12.56□□□□□ -0.4
COL6A1-204ENST00000486023 CT45A10P0DMU9 189 aa12.55□□□□□ -0.4
COL6A1-204ENST00000486023 RPL12P30050 165 aaKnown RBP12.55□□□□□ -0.4
COL6A1-204ENST00000486023 TSPOP30536 169 aa12.55□□□□□ -0.4
COL6A1-204ENST00000486023 ERCC8Q13216 396 aa12.55□□□□□ -0.4
COL6A1-204ENST00000486023 TMEM256Q8N2U0 113 aa12.55□□□□□ -0.4
COL6A1-204ENST00000486023 ATP5SQ99766 215 aa12.55□□□□□ -0.4
COL6A1-204ENST00000486023 SLC25A2Q9BXI2 301 aa12.55□□□□□ -0.4
COL6A1-204ENST00000486023 TMEM14CQ9P0S9 112 aa12.55□□□□□ -0.4
COL6A1-204ENST00000486023 HSPB11Q9Y547 144 aa12.55□□□□□ -0.4
COL6A1-204ENST00000486023 IFNA5P01569 189 aa12.54□□□□□ -0.4
COL6A1-204ENST00000486023 OR10J4P0C629 311 aa12.54□□□□□ -0.4
COL6A1-204ENST00000486023 TAS2R60P59551 318 aa12.54□□□□□ -0.4
COL6A1-204ENST00000486023 GFI1BQ5VTD9 330 aa12.54□□□□□ -0.4
COL6A1-204ENST00000486023 FAM122CQ6P4D5 195 aa12.54□□□□□ -0.4
COL6A1-204ENST00000486023 OR51M1Q9H341 326 aa12.54□□□□□ -0.4
COL6A1-204ENST00000486023 AAMDCQ9H7C9 122 aa12.54□□□□□ -0.4
COL6A1-204ENST00000486023 KCNIP2Q9NS61 270 aa12.54□□□□□ -0.4
COL6A1-204ENST00000486023 DNAH10Q8IVF4 4471 aa12.54□□□□□ -0.4
COL6A1-204ENST00000486023 TRAV12-3A0A0B4J271 114 aa12.53□□□□□ -0.4
COL6A1-204ENST00000486023 NDUFB4O95168 129 aa12.53□□□□□ -0.4
COL6A1-204ENST00000486023 LEPP41159 167 aa12.53□□□□□ -0.4
COL6A1-204ENST00000486023 ICAM4Q14773 271 aa12.53□□□□□ -0.4
COL6A1-204ENST00000486023 FFAR4Q5NUL3 377 aa12.53□□□□□ -0.4
COL6A1-204ENST00000486023 LYRM9A8MSI8 78 aa12.52□□□□□ -0.41
COL6A1-204ENST00000486023 NPIPB6E9PJ23 425 aa12.52□□□□□ -0.41
COL6A1-204ENST00000486023 H7BYZ3 331 aa12.52□□□□□ -0.41
COL6A1-204ENST00000486023 ZNF253O75346 499 aa12.52□□□□□ -0.41
COL6A1-204ENST00000486023 EIF3GO75821 320 aaKnown RBP eCLIP12.52□□□□□ -0.41
COL6A1-204ENST00000486023 P0DMU3 169 aa12.52□□□□□ -0.41
COL6A1-204ENST00000486023 FAM231AP0DMU4 169 aa12.52□□□□□ -0.41
COL6A1-204ENST00000486023 FAM231CP0DMU5 169 aa12.52□□□□□ -0.41
COL6A1-204ENST00000486023 OXA1LQ15070 435 aa12.52□□□□□ -0.41
COL6A1-204ENST00000486023 TMEM88Q6PEY1 159 aa12.52□□□□□ -0.41
COL6A1-204ENST00000486023 UBE2DNLQ8IWF7 75 aa12.52□□□□□ -0.41
COL6A1-204ENST00000486023 CCDC28AQ8IWP9 274 aa12.52□□□□□ -0.41
COL6A1-204ENST00000486023 C16orf74Q96GX8 76 aa12.52□□□□□ -0.41
COL6A1-204ENST00000486023 FAM167A-AS1Q96KT0 104 aa12.52□□□□□ -0.41
COL6A1-204ENST00000486023 PAXXQ9BUH6 204 aa12.52□□□□□ -0.41
COL6A1-204ENST00000486023 NOP10Q9NPE3 64 aaKnown RBP12.52□□□□□ -0.41
COL6A1-204ENST00000486023 FUT9Q9Y231 359 aa12.52□□□□□ -0.41
COL6A1-204ENST00000486023 F5H768 121 aa12.51□□□□□ -0.41
COL6A1-204ENST00000486023 OR7C2O60412 319 aa12.51□□□□□ -0.41
COL6A1-204ENST00000486023 NBEAP1P0C6P0 100 aa12.51□□□□□ -0.41
COL6A1-204ENST00000486023 RNF141Q8WVD5 230 aa12.51□□□□□ -0.41
COL6A1-204ENST00000486023 MED28Q9H204 178 aa12.51□□□□□ -0.41
COL6A1-204ENST00000486023 WFDC1Q9HC57 220 aa12.51□□□□□ -0.41
COL6A1-204ENST00000486023 IGKV2-40A0A087WW87 121 aaPredicted RBP12.5□□□□□ -0.41
COL6A1-204ENST00000486023 M0R2N4 97 aa12.5□□□□□ -0.41
COL6A1-204ENST00000486023 IGKV2D-40P01614 121 aaPredicted RBP12.5□□□□□ -0.41
COL6A1-204ENST00000486023 PDE6HQ13956 83 aa12.5□□□□□ -0.41
COL6A1-204ENST00000486023 MRPL53Q96EL3 112 aaKnown RBP12.5□□□□□ -0.41
COL6A1-204ENST00000486023 MRPL32Q9BYC8 188 aaKnown RBP12.5□□□□□ -0.41
COL6A1-204ENST00000486023 AGPAT4-IT1Q9H0P7 198 aa12.5□□□□□ -0.41
COL6A1-204ENST00000486023 PRELID1Q9Y255 219 aa12.5□□□□□ -0.41
COL6A1-204ENST00000486023 TIMM8BQ9Y5J9 83 aaPredicted RBP12.5□□□□□ -0.41
COL6A1-204ENST00000486023 BIRC6Q9NR09 4857 aa12.49□□□□□ -0.41
COL6A1-204ENST00000486023 PLAC8L1A1L4L8 177 aa12.49□□□□□ -0.41
COL6A1-204ENST00000486023 PTTG1O95997 202 aa12.49□□□□□ -0.41
COL6A1-204ENST00000486023 RNASE4P34096 147 aaKnown RBP12.49□□□□□ -0.41
COL6A1-204ENST00000486023 RANP62826 216 aaKnown RBP12.49□□□□□ -0.41
COL6A1-204ENST00000486023 POM121L12Q8N7R1 296 aa12.49□□□□□ -0.41
COL6A1-204ENST00000486023 ZNF493Q6ZR52 646 aa12.48□□□□□ -0.41
COL6A1-204ENST00000486023 TMEM263Q8WUH6 116 aaKnown RBP12.48□□□□□ -0.41
COL6A1-204ENST00000486023 FXYD5Q96DB9 178 aa12.48□□□□□ -0.41
COL6A1-204ENST00000486023 PHYHIPLQ96FC7 376 aa12.48□□□□□ -0.41
COL6A1-204ENST00000486023 FAM210BQ96KR6 192 aa12.48□□□□□ -0.41
COL6A1-204ENST00000486023 C20orf144Q9BQM9 153 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms