RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.28□□□□□ -1.24
CTSA-208ENST00000485627 OR11H1Q8NG94 326 aa7.28□□□□□ -1.24
CTSA-208ENST00000485627 GLMPQ8WWB7 406 aa7.28□□□□□ -1.24
CTSA-208ENST00000485627 FMC1Q96HJ9 113 aa7.28□□□□□ -1.24
CTSA-208ENST00000485627 RHPN1-AS1Q9BWJ2 59 aa7.28□□□□□ -1.24
CTSA-208ENST00000485627 CLEC5AQ9NY25 188 aa7.28□□□□□ -1.24
CTSA-208ENST00000485627 SMAD5-AS1Q9Y6J3 95 aa7.28□□□□□ -1.24
CTSA-208ENST00000485627 LY96Q9Y6Y9 160 aa7.28□□□□□ -1.24
CTSA-208ENST00000485627 A0A087WWC5 75 aa7.27□□□□□ -1.25
CTSA-208ENST00000485627 A0A1B0GUS0 222 aa7.27□□□□□ -1.25
CTSA-208ENST00000485627 SERTM2A0A1B0GWG4 89 aa7.27□□□□□ -1.25
CTSA-208ENST00000485627 A0A1W2PRX2 142 aa7.27□□□□□ -1.25
CTSA-208ENST00000485627 MGST1P10620 155 aaKnown RBP7.27□□□□□ -1.25
CTSA-208ENST00000485627 CD28P10747 220 aa7.27□□□□□ -1.25
CTSA-208ENST00000485627 TMEM183BQ1AE95 376 aa7.27□□□□□ -1.25
CTSA-208ENST00000485627 CENPWQ5EE01 88 aa7.27□□□□□ -1.25
CTSA-208ENST00000485627 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.27□□□□□ -1.25
CTSA-208ENST00000485627 C18orf65Q6ZTR6 163 aa7.27□□□□□ -1.25
CTSA-208ENST00000485627 GOLT1AQ6ZVE7 132 aa7.27□□□□□ -1.25
CTSA-208ENST00000485627 LINC01551Q86U37 167 aa7.27□□□□□ -1.25
CTSA-208ENST00000485627 BAGE2Q86Y30 109 aa7.27□□□□□ -1.25
CTSA-208ENST00000485627 C16orf92Q96LL3 132 aa7.27□□□□□ -1.25
CTSA-208ENST00000485627 CTDSP1Q9GZU7 261 aa7.27□□□□□ -1.25
CTSA-208ENST00000485627 ZNF331Q9NQX6 463 aaPredicted RBP7.27□□□□□ -1.25
CTSA-208ENST00000485627 PEMTQ9UBM1 199 aa7.27□□□□□ -1.25
CTSA-208ENST00000485627 MEGF8Q7Z7M0 2845 aa7.26□□□□□ -1.25
CTSA-208ENST00000485627 TRAV34A0A0B4J273 112 aa7.26□□□□□ -1.25
CTSA-208ENST00000485627 A8MWP6 167 aa7.26□□□□□ -1.25
CTSA-208ENST00000485627 CHEK1O14757 476 aa7.26□□□□□ -1.25
CTSA-208ENST00000485627 PPP1R2P9O14990 202 aa7.26□□□□□ -1.25
CTSA-208ENST00000485627 SLURP1P55000 103 aa7.26□□□□□ -1.25
CTSA-208ENST00000485627 KLF5Q13887 457 aaPredicted RBP7.26□□□□□ -1.25
CTSA-208ENST00000485627 DEFB136Q30KP8 78 aa7.26□□□□□ -1.25
CTSA-208ENST00000485627 RNF212Q495C1 297 aa7.26□□□□□ -1.25
CTSA-208ENST00000485627 SAMD13Q5VXD3 122 aa7.26□□□□□ -1.25
CTSA-208ENST00000485627 TMEM88Q6PEY1 159 aa7.26□□□□□ -1.25
CTSA-208ENST00000485627 C8orf86Q6ZUL3 223 aa7.26□□□□□ -1.25
CTSA-208ENST00000485627 TCF24Q7RTU0 167 aa7.26□□□□□ -1.25
CTSA-208ENST00000485627 OCC1Q8TAD7 63 aa7.26□□□□□ -1.25
CTSA-208ENST00000485627 WIPF2Q8TF74 440 aaPredicted RBP7.26□□□□□ -1.25
CTSA-208ENST00000485627 LINC00479Q96M42 142 aa7.26□□□□□ -1.25
CTSA-208ENST00000485627 CITED2Q99967 270 aaPredicted RBP7.26□□□□□ -1.25
CTSA-208ENST00000485627 BIN3Q9NQY0 253 aa7.26□□□□□ -1.25
CTSA-208ENST00000485627 AURKAIP1Q9NWT8 199 aaPredicted RBP7.26□□□□□ -1.25
CTSA-208ENST00000485627 TRBV20OR9-2A0A075B6H5 130 aa7.25□□□□□ -1.25
CTSA-208ENST00000485627 TMEM213A2RRL7 107 aa7.25□□□□□ -1.25
CTSA-208ENST00000485627 PGPEP1LA6NFU8 196 aa7.25□□□□□ -1.25
CTSA-208ENST00000485627 FBLL1A6NHQ2 334 aaKnown RBP7.25□□□□□ -1.25
CTSA-208ENST00000485627 DIRC3C9JPN6 131 aa7.25□□□□□ -1.25
CTSA-208ENST00000485627 H7BYZ3 331 aa7.25□□□□□ -1.25
CTSA-208ENST00000485627 M0R3E3 92 aa7.25□□□□□ -1.25
CTSA-208ENST00000485627 DNASE2O00115 360 aaPredicted RBP7.25□□□□□ -1.25
CTSA-208ENST00000485627 ISLRO14498 428 aa7.25□□□□□ -1.25
CTSA-208ENST00000485627 ID1P41134 155 aa7.25□□□□□ -1.25
CTSA-208ENST00000485627 PROK1P58294 105 aa7.25□□□□□ -1.25
CTSA-208ENST00000485627 CBLN2Q8IUK8 224 aa7.25□□□□□ -1.25
CTSA-208ENST00000485627 C15orf54Q8N8G6 183 aa7.25□□□□□ -1.25
CTSA-208ENST00000485627 TMEM75Q8N9X5 138 aa7.25□□□□□ -1.25
CTSA-208ENST00000485627 ISOC2Q96AB3 205 aa7.25□□□□□ -1.25
CTSA-208ENST00000485627 MRPL53Q96EL3 112 aaKnown RBP7.25□□□□□ -1.25
CTSA-208ENST00000485627 SMIM12Q96EX1 92 aa7.25□□□□□ -1.25
CTSA-208ENST00000485627 NRN1Q9NPD7 142 aa7.25□□□□□ -1.25
CTSA-208ENST00000485627 KLF12Q9Y4X4 402 aa7.25□□□□□ -1.25
CTSA-208ENST00000485627 IGKV3-7A0A075B6H7 116 aa7.24□□□□□ -1.25
CTSA-208ENST00000485627 CXorf65A6NEN9 183 aa7.24□□□□□ -1.25
CTSA-208ENST00000485627 C2orf70A6NJV1 201 aa7.24□□□□□ -1.25
CTSA-208ENST00000485627 CCL24O00175 119 aa7.24□□□□□ -1.25
CTSA-208ENST00000485627 TSPAN4O14817 238 aa7.24□□□□□ -1.25
CTSA-208ENST00000485627 CBLN1P23435 193 aa7.24□□□□□ -1.25
CTSA-208ENST00000485627 S100PP25815 95 aa7.24□□□□□ -1.25
CTSA-208ENST00000485627 ERVFC1-1P60608 527 aa7.24□□□□□ -1.25
CTSA-208ENST00000485627 PAFAH1B2P68402 229 aa7.24□□□□□ -1.25
CTSA-208ENST00000485627 FLI1Q01543 452 aaPredicted RBP7.24□□□□□ -1.25
CTSA-208ENST00000485627 FOXL1Q12952 345 aa7.24□□□□□ -1.25
CTSA-208ENST00000485627 PSG3Q16557 428 aa7.24□□□□□ -1.25
CTSA-208ENST00000485627 IGFL4Q6B9Z1 124 aa7.24□□□□□ -1.25
CTSA-208ENST00000485627 LCN12Q6JVE5 192 aa7.24□□□□□ -1.25
CTSA-208ENST00000485627 PRNTQ86SH4 94 aa7.24□□□□□ -1.25
CTSA-208ENST00000485627 OR10G8Q8NGN5 311 aa7.24□□□□□ -1.25
CTSA-208ENST00000485627 OR9G4Q8NGQ1 327 aa7.24□□□□□ -1.25
CTSA-208ENST00000485627 DYNLRB2Q8TF09 96 aa7.24□□□□□ -1.25
CTSA-208ENST00000485627 SFRP2Q96HF1 295 aa7.24□□□□□ -1.25
CTSA-208ENST00000485627 SGK494Q96LW2 274 aa7.24□□□□□ -1.25
CTSA-208ENST00000485627 IGF2BP2-AS1Q96M15 143 aa7.24□□□□□ -1.25
CTSA-208ENST00000485627 DUX3Q96PT4 197 aa7.24□□□□□ -1.25
CTSA-208ENST00000485627 TUBA4BQ9H853 241 aa7.24□□□□□ -1.25
CTSA-208ENST00000485627 TMEM242Q9NWH2 141 aa7.24□□□□□ -1.25
CTSA-208ENST00000485627 PSG8Q9UQ74 426 aa7.24□□□□□ -1.25
CTSA-208ENST00000485627 ZFP30Q9Y2G7 519 aa7.24□□□□□ -1.25
CTSA-208ENST00000485627 IGKV2-40A0A087WW87 121 aaPredicted RBP7.23□□□□□ -1.25
CTSA-208ENST00000485627 TRBV6-1A0A0K0K1D8 114 aa7.23□□□□□ -1.25
CTSA-208ENST00000485627 LTAP01374 205 aa7.23□□□□□ -1.25
CTSA-208ENST00000485627 IGKV2D-40P01614 121 aaPredicted RBP7.23□□□□□ -1.25
CTSA-208ENST00000485627 FOLR2P14207 255 aa7.23□□□□□ -1.25
CTSA-208ENST00000485627 HLA-DMBP28068 263 aa7.23□□□□□ -1.25
CTSA-208ENST00000485627 NSUN5P1Q3KNT7 163 aa7.23□□□□□ -1.25
CTSA-208ENST00000485627 PRR27Q6MZM9 219 aa7.23□□□□□ -1.25
CTSA-208ENST00000485627 KCNIP4Q6PIL6 250 aa7.23□□□□□ -1.25
CTSA-208ENST00000485627 Q86TA4 180 aa7.23□□□□□ -1.25
CTSA-208ENST00000485627 WFDC3Q8IUB2 231 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms