RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 PLECQ15149 4684 aaKnown RBP12.89□□□□□ -0.35
SREBF1-213ENST00000485080 ZNF705FA8MVS1 300 aaPredicted RBP12.88□□□□□ -0.35
SREBF1-213ENST00000485080 ZNF705DP0CH99 300 aaPredicted RBP12.88□□□□□ -0.35
SREBF1-213ENST00000485080 ZNF705BP0CI00 300 aaPredicted RBP12.88□□□□□ -0.35
SREBF1-213ENST00000485080 HIST1H1AQ02539 215 aaPredicted RBP12.88□□□□□ -0.35
SREBF1-213ENST00000485080 CASC10Q5T4H9 136 aa12.88□□□□□ -0.35
SREBF1-213ENST00000485080 PQLC2Q6ZP29 291 aa12.88□□□□□ -0.35
SREBF1-213ENST00000485080 LYPD1Q8N2G4 141 aa12.88□□□□□ -0.35
SREBF1-213ENST00000485080 IGF2BP2-AS1Q96M15 143 aa12.88□□□□□ -0.35
SREBF1-213ENST00000485080 SMIM9A6NGZ8 99 aa12.87□□□□□ -0.35
SREBF1-213ENST00000485080 SMLR1H3BR10 107 aa12.87□□□□□ -0.35
SREBF1-213ENST00000485080 OR7C2O60412 319 aa12.87□□□□□ -0.35
SREBF1-213ENST00000485080 RAB2AP61019 212 aa12.87□□□□□ -0.35
SREBF1-213ENST00000485080 KCNRGQ8N5I3 272 aa12.87□□□□□ -0.35
SREBF1-213ENST00000485080 RPP25LQ8N5L8 163 aaKnown RBP12.87□□□□□ -0.35
SREBF1-213ENST00000485080 OR11H4Q8NGC9 324 aa12.87□□□□□ -0.35
SREBF1-213ENST00000485080 OR10G4Q8NGN3 311 aa12.87□□□□□ -0.35
SREBF1-213ENST00000485080 OR10G9Q8NGN4 311 aa12.87□□□□□ -0.35
SREBF1-213ENST00000485080 OR10G7Q8NGN6 311 aa12.87□□□□□ -0.35
SREBF1-213ENST00000485080 OR10J6PQ8NGY7 276 aa12.87□□□□□ -0.35
SREBF1-213ENST00000485080 CYTL1Q9NRR1 136 aa12.87□□□□□ -0.35
SREBF1-213ENST00000485080 A0A1W2PPV4 95 aa12.86□□□□□ -0.35
SREBF1-213ENST00000485080 PRAC2D3DTV9 90 aa12.86□□□□□ -0.35
SREBF1-213ENST00000485080 BOLA2-SMG1P6H3BVE0 249 aa12.86□□□□□ -0.35
SREBF1-213ENST00000485080 BLNKQ8WV28 456 aa12.86□□□□□ -0.35
SREBF1-213ENST00000485080 ODF3Q96PU9 254 aa12.86□□□□□ -0.35
SREBF1-213ENST00000485080 AAMDCQ9H7C9 122 aa12.86□□□□□ -0.35
SREBF1-213ENST00000485080 IGHV4-28A0A0C4DH34 117 aa12.85□□□□□ -0.35
SREBF1-213ENST00000485080 A0A0D9SG52 128 aa12.85□□□□□ -0.35
SREBF1-213ENST00000485080 NPIPB6E9PJ23 425 aa12.85□□□□□ -0.35
SREBF1-213ENST00000485080 CRXO43186 299 aaPredicted RBP12.85□□□□□ -0.35
SREBF1-213ENST00000485080 OR10J4P0C629 311 aa12.85□□□□□ -0.35
SREBF1-213ENST00000485080 FXYD7P58549 80 aa12.85□□□□□ -0.35
SREBF1-213ENST00000485080 UBE2L3P68036 154 aaKnown RBP12.85□□□□□ -0.35
SREBF1-213ENST00000485080 C1orf158Q8N1D5 194 aa12.85□□□□□ -0.35
SREBF1-213ENST00000485080 ST6GAL2Q96JF0 529 aa12.85□□□□□ -0.35
SREBF1-213ENST00000485080 LYSTQ99698 3801 aa12.85□□□□□ -0.35
SREBF1-213ENST00000485080 SH3BGRL3Q9H299 93 aa12.85□□□□□ -0.35
SREBF1-213ENST00000485080 GOLT1BQ9Y3E0 138 aa12.85□□□□□ -0.35
SREBF1-213ENST00000485080 SACSQ9NZJ4 4579 aa12.85□□□□□ -0.35
SREBF1-213ENST00000485080 M0R3E3 92 aa12.84□□□□□ -0.35
SREBF1-213ENST00000485080 STAG3L2P0CL84 134 aa12.84□□□□□ -0.35
SREBF1-213ENST00000485080 STAG3L3P0CL85 134 aa12.84□□□□□ -0.35
SREBF1-213ENST00000485080 RBMY1A1P0DJD3 496 aaKnown RBP12.84□□□□□ -0.35
SREBF1-213ENST00000485080 RBMY1CP0DJD4 496 aa12.84□□□□□ -0.35
SREBF1-213ENST00000485080 CDC34P49427 236 aaPredicted RBP12.84□□□□□ -0.35
SREBF1-213ENST00000485080 RBMY1FQ15415 496 aaKnown RBP12.84□□□□□ -0.35
SREBF1-213ENST00000485080 FAM122CQ6P4D5 195 aa12.84□□□□□ -0.35
SREBF1-213ENST00000485080 TCTE3Q8IZS6 198 aa12.84□□□□□ -0.35
SREBF1-213ENST00000485080 INSP01308 110 aa12.83□□□□□ -0.36
SREBF1-213ENST00000485080 CDKN1BP46527 198 aa12.83□□□□□ -0.36
SREBF1-213ENST00000485080 ICAM4Q14773 271 aa12.83□□□□□ -0.36
SREBF1-213ENST00000485080 SPINK13Q1W4C9 94 aa12.83□□□□□ -0.36
SREBF1-213ENST00000485080 EXOC3-AS1Q8N2X6 119 aa12.83□□□□□ -0.36
SREBF1-213ENST00000485080 ARL6IP6Q8N6S5 226 aa12.83□□□□□ -0.36
SREBF1-213ENST00000485080 SUN5Q8TC36 379 aa12.83□□□□□ -0.36
SREBF1-213ENST00000485080 PHYHIPLQ96FC7 376 aa12.83□□□□□ -0.36
SREBF1-213ENST00000485080 ARPC5LQ9BPX5 153 aa12.83□□□□□ -0.36
SREBF1-213ENST00000485080 M0R2Z0 102 aa12.82□□□□□ -0.36
SREBF1-213ENST00000485080 TSPOP30536 169 aa12.82□□□□□ -0.36
SREBF1-213ENST00000485080 C9orf47Q6ZRZ4 202 aa12.82□□□□□ -0.36
SREBF1-213ENST00000485080 RAB24Q969Q5 203 aa12.82□□□□□ -0.36
SREBF1-213ENST00000485080 LINC00477Q96M19 166 aa12.82□□□□□ -0.36
SREBF1-213ENST00000485080 PPP1R14DQ9NXH3 145 aa12.82□□□□□ -0.36
SREBF1-213ENST00000485080 DNAH1Q9P2D7 4330 aa12.82□□□□□ -0.36
SREBF1-213ENST00000485080 TMEM189A5PLL7 270 aa12.81□□□□□ -0.36
SREBF1-213ENST00000485080 CT45A10P0DMU9 189 aa12.81□□□□□ -0.36
SREBF1-213ENST00000485080 TMEM256Q8N2U0 113 aa12.81□□□□□ -0.36
SREBF1-213ENST00000485080 C20orf144Q9BQM9 153 aa12.81□□□□□ -0.36
SREBF1-213ENST00000485080 ACTR3CQ9C0K3 210 aaPredicted RBP12.81□□□□□ -0.36
SREBF1-213ENST00000485080 SLC25A5P05141 298 aaKnown RBP12.8□□□□□ -0.36
SREBF1-213ENST00000485080 RANP62826 216 aaKnown RBP12.8□□□□□ -0.36
SREBF1-213ENST00000485080 ZFAND6Q6FIF0 208 aa12.8□□□□□ -0.36
SREBF1-213ENST00000485080 C11orf45Q8TAV5 145 aa12.8□□□□□ -0.36
SREBF1-213ENST00000485080 FAM19A4Q96LR4 140 aa12.8□□□□□ -0.36
SREBF1-213ENST00000485080 Q9H3A6 140 aa12.8□□□□□ -0.36
SREBF1-213ENST00000485080 OTORQ9NRC9 128 aa12.8□□□□□ -0.36
SREBF1-213ENST00000485080 TRBV7-9A0A0J9YWB2 115 aa12.79□□□□□ -0.36
SREBF1-213ENST00000485080 RBAKDNA6NC62 111 aa12.79□□□□□ -0.36
SREBF1-213ENST00000485080 DEFB4AO15263 64 aa12.79□□□□□ -0.36
SREBF1-213ENST00000485080 BCL2L11O43521 198 aa12.79□□□□□ -0.36
SREBF1-213ENST00000485080 EIF3GO75821 320 aaKnown RBP eCLIP12.79□□□□□ -0.36
SREBF1-213ENST00000485080 HBE1P02100 147 aa12.79□□□□□ -0.36
SREBF1-213ENST00000485080 NMBP08949 121 aa12.79□□□□□ -0.36
SREBF1-213ENST00000485080 ARL14EPLP0DKL9 152 aa12.79□□□□□ -0.36
SREBF1-213ENST00000485080 BAP18Q8IXM2 172 aa12.79□□□□□ -0.36
SREBF1-213ENST00000485080 RXFP4Q8TDU9 374 aa12.79□□□□□ -0.36
SREBF1-213ENST00000485080 AGPAT4-IT1Q9H0P7 198 aa12.79□□□□□ -0.36
SREBF1-213ENST00000485080 KANTRA0A1W2PQU2 76 aa12.78□□□□□ -0.36
SREBF1-213ENST00000485080 CXorf1O96002 111 aa12.78□□□□□ -0.36
SREBF1-213ENST00000485080 PRB4P10163 310 aaPredicted RBP12.78□□□□□ -0.36
SREBF1-213ENST00000485080 CRISP2P16562 243 aa12.78□□□□□ -0.36
SREBF1-213ENST00000485080 LEPP41159 167 aa12.78□□□□□ -0.36
SREBF1-213ENST00000485080 CSN1S1P47710 185 aa12.78□□□□□ -0.36
SREBF1-213ENST00000485080 TMEM208Q9BTX3 173 aa12.78□□□□□ -0.36
SREBF1-213ENST00000485080 TMEM167BQ9NRX6 74 aa12.78□□□□□ -0.36
SREBF1-213ENST00000485080 TRAV12-2A0A075B6T6 113 aa12.77□□□□□ -0.37
SREBF1-213ENST00000485080 IGHV3OR16-12A0A075B7B8 117 aa12.77□□□□□ -0.37
SREBF1-213ENST00000485080 CTXND1A0A1B0GTU2 59 aa12.77□□□□□ -0.37
SREBF1-213ENST00000485080 NUPR2A6NF83 97 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms