RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 CAV2P51636 162 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 CYCSP99999 105 aaKnown RBP4.43□□□□□ -1.7
PTCD3-215ENST00000484203 ASAH1Q13510 395 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 LCN15Q6UWW0 184 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 GSG1LQ6UXU4 331 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 ZNF709Q8N972 641 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 ZNF738Q8NE65 137 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 OR1L4Q8NGR5 311 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 ARL6Q9H0F7 186 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 ARV1Q9H2C2 271 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 DNAJC4Q9NNZ3 241 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 KCNIP2Q9NS61 270 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 UQCC1Q9NVA1 299 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 PXMP4Q9Y6I8 212 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 IGHV4-4A0A075B6R2 117 aa4.42□□□□□ -1.7
PTCD3-215ENST00000484203 IGHV3OR16-12A0A075B7B8 117 aa4.42□□□□□ -1.7
PTCD3-215ENST00000484203 LYRM9A8MSI8 78 aa4.42□□□□□ -1.7
PTCD3-215ENST00000484203 AGPAT2O15120 278 aa4.42□□□□□ -1.7
PTCD3-215ENST00000484203 IGKV3-20P01619 116 aa4.42□□□□□ -1.7
PTCD3-215ENST00000484203 CXCL3P19876 107 aa4.42□□□□□ -1.7
PTCD3-215ENST00000484203 GATA2P23769 480 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-215ENST00000484203 CAMLGP49069 296 aa4.42□□□□□ -1.7
PTCD3-215ENST00000484203 CNN1P51911 297 aaKnown RBP4.42□□□□□ -1.7
PTCD3-215ENST00000484203 DEFA1P59665 94 aa4.42□□□□□ -1.7
PTCD3-215ENST00000484203 DEFA3P59666 94 aa4.42□□□□□ -1.7
PTCD3-215ENST00000484203 RRAS2P62070 204 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-215ENST00000484203 FGL1Q08830 312 aa4.42□□□□□ -1.7
PTCD3-215ENST00000484203 SLC38A11Q08AI6 406 aa4.42□□□□□ -1.7
PTCD3-215ENST00000484203 PSG3Q16557 428 aa4.42□□□□□ -1.7
PTCD3-215ENST00000484203 C10orf113Q5VZT2 155 aa4.42□□□□□ -1.7
PTCD3-215ENST00000484203 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.42□□□□□ -1.7
PTCD3-215ENST00000484203 ZNF493Q6ZR52 646 aa4.42□□□□□ -1.7
PTCD3-215ENST00000484203 Q6ZTC4 211 aa4.42□□□□□ -1.7
PTCD3-215ENST00000484203 LINC00305Q7Z4B0 112 aa4.42□□□□□ -1.7
PTCD3-215ENST00000484203 ENKURQ8TC29 256 aa4.42□□□□□ -1.7
PTCD3-215ENST00000484203 C20orf144Q9BQM9 153 aa4.42□□□□□ -1.7
PTCD3-215ENST00000484203 NIPSNAP3BQ9BS92 247 aa4.42□□□□□ -1.7
PTCD3-215ENST00000484203 SCRT1Q9BWW7 348 aa4.42□□□□□ -1.7
PTCD3-215ENST00000484203 SLC25A31Q9H0C2 315 aa4.42□□□□□ -1.7
PTCD3-215ENST00000484203 LYRM2Q9NU23 88 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-215ENST00000484203 APLNQ9ULZ1 77 aa4.42□□□□□ -1.7
PTCD3-215ENST00000484203 RCL1Q9Y2P8 373 aaKnown RBP4.42□□□□□ -1.7
PTCD3-215ENST00000484203 PLECQ15149 4684 aaKnown RBP4.42□□□□□ -1.7
PTCD3-215ENST00000484203 TRAV6A0A075B6T7 132 aa4.41□□□□□ -1.7
PTCD3-215ENST00000484203 BOLA2-SMG1P6H3BVE0 249 aa4.41□□□□□ -1.7
PTCD3-215ENST00000484203 ZNF253O75346 499 aa4.41□□□□□ -1.7
PTCD3-215ENST00000484203 PET100P0DJ07 73 aa4.41□□□□□ -1.7
PTCD3-215ENST00000484203 RPL29P47914 159 aaKnown RBP4.41□□□□□ -1.7
PTCD3-215ENST00000484203 EMP1P54849 157 aa4.41□□□□□ -1.7
PTCD3-215ENST00000484203 FAM3BP58499 235 aaPredicted RBP4.41□□□□□ -1.7
PTCD3-215ENST00000484203 TAS2R60P59551 318 aa4.41□□□□□ -1.7
PTCD3-215ENST00000484203 DAD1P61803 113 aa4.41□□□□□ -1.7
PTCD3-215ENST00000484203 RHOBP62745 196 aa4.41□□□□□ -1.7
PTCD3-215ENST00000484203 BAXQ07812 192 aa4.41□□□□□ -1.7
PTCD3-215ENST00000484203 PDE6HQ13956 83 aa4.41□□□□□ -1.7
PTCD3-215ENST00000484203 VWC2Q2TAL6 325 aa4.41□□□□□ -1.7
PTCD3-215ENST00000484203 C12orf74Q32Q52 190 aa4.41□□□□□ -1.7
PTCD3-215ENST00000484203 GDF5OSQ5U4N7 250 aa4.41□□□□□ -1.7
PTCD3-215ENST00000484203 SUMO4Q6EEV6 95 aa4.41□□□□□ -1.7
PTCD3-215ENST00000484203 TMEM182Q6ZP80 229 aaPredicted RBP4.41□□□□□ -1.7
PTCD3-215ENST00000484203 LINC00336Q6ZUF6 198 aa4.41□□□□□ -1.7
PTCD3-215ENST00000484203 OR11H7Q8NGC8 314 aa4.41□□□□□ -1.7
PTCD3-215ENST00000484203 OR8A1Q8NGG7 326 aa4.41□□□□□ -1.7
PTCD3-215ENST00000484203 OR10J6PQ8NGY7 276 aa4.41□□□□□ -1.7
PTCD3-215ENST00000484203 RPUSD4Q96CM3 377 aaKnown RBP4.41□□□□□ -1.7
PTCD3-215ENST00000484203 SLC35B3Q9H1N7 401 aa4.41□□□□□ -1.7
PTCD3-215ENST00000484203 WDR83OSQ9Y284 106 aa4.41□□□□□ -1.7
PTCD3-215ENST00000484203 LSM5Q9Y4Y9 91 aaKnown RBP4.41□□□□□ -1.7
PTCD3-215ENST00000484203 E5RGE8 158 aa4.4□□□□□ -1.71
PTCD3-215ENST00000484203 F6UB75 175 aa4.4□□□□□ -1.71
PTCD3-215ENST00000484203 H7BYZ3 331 aa4.4□□□□□ -1.71
PTCD3-215ENST00000484203 CDKN1BP46527 198 aa4.4□□□□□ -1.71
PTCD3-215ENST00000484203 TIRAPP58753 221 aa4.4□□□□□ -1.71
PTCD3-215ENST00000484203 S100A10P60903 97 aa4.4□□□□□ -1.71
PTCD3-215ENST00000484203 SUMO2P61956 95 aaKnown RBP4.4□□□□□ -1.71
PTCD3-215ENST00000484203 HIST1H1AQ02539 215 aaPredicted RBP4.4□□□□□ -1.71
PTCD3-215ENST00000484203 RNF212Q495C1 297 aa4.4□□□□□ -1.71
PTCD3-215ENST00000484203 FAM222AQ5U5X8 452 aa4.4□□□□□ -1.71
PTCD3-215ENST00000484203 AMTNQ6UX39 209 aa4.4□□□□□ -1.71
PTCD3-215ENST00000484203 NRARPQ7Z6K4 114 aa4.4□□□□□ -1.71
PTCD3-215ENST00000484203 CCDC28AQ8IWP9 274 aa4.4□□□□□ -1.71
PTCD3-215ENST00000484203 TMEM252Q8N6L7 170 aa4.4□□□□□ -1.71
PTCD3-215ENST00000484203 POM121L12Q8N7R1 296 aa4.4□□□□□ -1.71
PTCD3-215ENST00000484203 C15orf53Q8NAA6 179 aa4.4□□□□□ -1.71
PTCD3-215ENST00000484203 NTN5Q8WTR8 489 aaPredicted RBP4.4□□□□□ -1.71
PTCD3-215ENST00000484203 MRPL53Q96EL3 112 aaKnown RBP4.4□□□□□ -1.71
PTCD3-215ENST00000484203 C16orf74Q96GX8 76 aa4.4□□□□□ -1.71
PTCD3-215ENST00000484203 UHRF2Q96PU4 802 aa4.4□□□□□ -1.71
PTCD3-215ENST00000484203 ODF3Q96PU9 254 aa4.4□□□□□ -1.71
PTCD3-215ENST00000484203 LINC01587Q99440 93 aa4.4□□□□□ -1.71
PTCD3-215ENST00000484203 SEC22CQ9BRL7 303 aa4.4□□□□□ -1.71
PTCD3-215ENST00000484203 NMES1Q9C002 83 aa4.4□□□□□ -1.71
PTCD3-215ENST00000484203 ZNF331Q9NQX6 463 aaPredicted RBP4.4□□□□□ -1.71
PTCD3-215ENST00000484203 BATF3Q9NR55 127 aa4.4□□□□□ -1.71
PTCD3-215ENST00000484203 SLC39A9Q9NUM3 307 aa4.4□□□□□ -1.71
PTCD3-215ENST00000484203 PTTG2Q9NZH5 202 aa4.4□□□□□ -1.71
PTCD3-215ENST00000484203 PRELID1Q9Y255 219 aa4.4□□□□□ -1.71
PTCD3-215ENST00000484203 YTHDF2Q9Y5A9 579 aaKnown RBP4.4□□□□□ -1.71
PTCD3-215ENST00000484203 TRAV8-2A0A0B4J237 113 aa4.39□□□□□ -1.71
PTCD3-215ENST00000484203 C17orf112F2Z3M2 114 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms