RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 OR10G9Q8NGN4 311 aa11.81□□□□□ -0.52
COL2A1-206ENST00000483376 OR10G7Q8NGN6 311 aa11.81□□□□□ -0.52
COL2A1-206ENST00000483376 ODF3Q96PU9 254 aa11.81□□□□□ -0.52
COL2A1-206ENST00000483376 SLC35B3Q9H1N7 401 aa11.81□□□□□ -0.52
COL2A1-206ENST00000483376 AAMDCQ9H7C9 122 aa11.81□□□□□ -0.52
COL2A1-206ENST00000483376 XCL2Q9UBD3 114 aa11.81□□□□□ -0.52
COL2A1-206ENST00000483376 X6R8D5 127 aa11.81□□□□□ -0.52
COL2A1-206ENST00000483376 ZNF705FA8MVS1 300 aaPredicted RBP11.8□□□□□ -0.52
COL2A1-206ENST00000483376 IGKV3-20P01619 116 aa11.8□□□□□ -0.52
COL2A1-206ENST00000483376 ZNF705DP0CH99 300 aaPredicted RBP11.8□□□□□ -0.52
COL2A1-206ENST00000483376 ZNF705BP0CI00 300 aaPredicted RBP11.8□□□□□ -0.52
COL2A1-206ENST00000483376 HIST1H1AQ02539 215 aaPredicted RBP11.8□□□□□ -0.52
COL2A1-206ENST00000483376 IGF2BP2-AS1Q96M15 143 aa11.8□□□□□ -0.52
COL2A1-206ENST00000483376 ARPC5LQ9BPX5 153 aa11.8□□□□□ -0.52
COL2A1-206ENST00000483376 SH3BGRL3Q9H299 93 aa11.8□□□□□ -0.52
COL2A1-206ENST00000483376 CSMD3Q7Z407 3707 aa11.8□□□□□ -0.52
COL2A1-206ENST00000483376 A0A0J9YWU9 116 aa11.79□□□□□ -0.52
COL2A1-206ENST00000483376 SMIM9A6NGZ8 99 aa11.79□□□□□ -0.52
COL2A1-206ENST00000483376 NPIPB6E9PJ23 425 aa11.79□□□□□ -0.52
COL2A1-206ENST00000483376 BOLA2-SMG1P6H3BVE0 249 aa11.79□□□□□ -0.52
COL2A1-206ENST00000483376 STAG3L2P0CL84 134 aa11.79□□□□□ -0.52
COL2A1-206ENST00000483376 STAG3L3P0CL85 134 aa11.79□□□□□ -0.52
COL2A1-206ENST00000483376 CDC34P49427 236 aaPredicted RBP11.79□□□□□ -0.52
COL2A1-206ENST00000483376 UBE2L3P68036 154 aaKnown RBP11.79□□□□□ -0.52
COL2A1-206ENST00000483376 OR10J6PQ8NGY7 276 aa11.79□□□□□ -0.52
COL2A1-206ENST00000483376 SUN5Q8TC36 379 aa11.79□□□□□ -0.52
COL2A1-206ENST00000483376 BLNKQ8WV28 456 aa11.79□□□□□ -0.52
COL2A1-206ENST00000483376 STARD9Q9P2P6 4700 aa11.79□□□□□ -0.52
COL2A1-206ENST00000483376 PRAC2D3DTV9 90 aa11.78□□□□□ -0.52
COL2A1-206ENST00000483376 CRXO43186 299 aaPredicted RBP11.78□□□□□ -0.52
COL2A1-206ENST00000483376 OR10J4P0C629 311 aa11.78□□□□□ -0.52
COL2A1-206ENST00000483376 FAM122CQ6P4D5 195 aa11.78□□□□□ -0.52
COL2A1-206ENST00000483376 ARL6IP6Q8N6S5 226 aa11.78□□□□□ -0.52
COL2A1-206ENST00000483376 M0R3E3 92 aa11.77□□□□□ -0.53
COL2A1-206ENST00000483376 EXOC3-AS1Q8N2X6 119 aa11.77□□□□□ -0.53
COL2A1-206ENST00000483376 RAB24Q969Q5 203 aa11.77□□□□□ -0.53
COL2A1-206ENST00000483376 PHYHIPLQ96FC7 376 aa11.77□□□□□ -0.53
COL2A1-206ENST00000483376 ACTR3CQ9C0K3 210 aaPredicted RBP11.77□□□□□ -0.53
COL2A1-206ENST00000483376 GOLT1BQ9Y3E0 138 aa11.77□□□□□ -0.53
COL2A1-206ENST00000483376 BCL2L11O43521 198 aa11.76□□□□□ -0.53
COL2A1-206ENST00000483376 INSP01308 110 aa11.76□□□□□ -0.53
COL2A1-206ENST00000483376 CDKN1BP46527 198 aa11.76□□□□□ -0.53
COL2A1-206ENST00000483376 FXYD7P58549 80 aa11.76□□□□□ -0.53
COL2A1-206ENST00000483376 ICAM4Q14773 271 aa11.76□□□□□ -0.53
COL2A1-206ENST00000483376 CASC10Q5T4H9 136 aa11.76□□□□□ -0.53
COL2A1-206ENST00000483376 C9orf47Q6ZRZ4 202 aa11.76□□□□□ -0.53
COL2A1-206ENST00000483376 C1orf158Q8N1D5 194 aa11.76□□□□□ -0.53
COL2A1-206ENST00000483376 LINC00477Q96M19 166 aa11.76□□□□□ -0.53
COL2A1-206ENST00000483376 C20orf144Q9BQM9 153 aa11.76□□□□□ -0.53
COL2A1-206ENST00000483376 DYNC2H1Q8NCM8 4307 aaKnown RBP11.76□□□□□ -0.53
COL2A1-206ENST00000483376 IGHV4-28A0A0C4DH34 117 aa11.75□□□□□ -0.53
COL2A1-206ENST00000483376 TRBV7-9A0A0J9YWB2 115 aa11.75□□□□□ -0.53
COL2A1-206ENST00000483376 KANTRA0A1W2PQU2 76 aa11.75□□□□□ -0.53
COL2A1-206ENST00000483376 RBAKDNA6NC62 111 aa11.75□□□□□ -0.53
COL2A1-206ENST00000483376 M0R2Z0 102 aa11.75□□□□□ -0.53
COL2A1-206ENST00000483376 C1QBP02746 253 aa11.75□□□□□ -0.53
COL2A1-206ENST00000483376 SLC25A5P05141 298 aaKnown RBP11.75□□□□□ -0.53
COL2A1-206ENST00000483376 SEC11BP0C7V7 166 aa11.75□□□□□ -0.53
COL2A1-206ENST00000483376 ARL14EPLP0DKL9 152 aa11.75□□□□□ -0.53
COL2A1-206ENST00000483376 TSPOP30536 169 aa11.75□□□□□ -0.53
COL2A1-206ENST00000483376 EIF5AP63241 154 aaKnown RBP11.75□□□□□ -0.53
COL2A1-206ENST00000483376 SPINK13Q1W4C9 94 aa11.75□□□□□ -0.53
COL2A1-206ENST00000483376 TMEM256Q8N2U0 113 aa11.75□□□□□ -0.53
COL2A1-206ENST00000483376 Q9H3A6 140 aa11.75□□□□□ -0.53
COL2A1-206ENST00000483376 OTORQ9NRC9 128 aa11.75□□□□□ -0.53
COL2A1-206ENST00000483376 CTXND1A0A1B0GTU2 59 aa11.74□□□□□ -0.53
COL2A1-206ENST00000483376 TMEM189A5PLL7 270 aa11.74□□□□□ -0.53
COL2A1-206ENST00000483376 CXorf1O96002 111 aa11.74□□□□□ -0.53
COL2A1-206ENST00000483376 NMBP08949 121 aa11.74□□□□□ -0.53
COL2A1-206ENST00000483376 RBMY1A1P0DJD3 496 aaKnown RBP11.74□□□□□ -0.53
COL2A1-206ENST00000483376 RBMY1CP0DJD4 496 aa11.74□□□□□ -0.53
COL2A1-206ENST00000483376 RANP62826 216 aaKnown RBP11.74□□□□□ -0.53
COL2A1-206ENST00000483376 RBMY1FQ15415 496 aaKnown RBP11.74□□□□□ -0.53
COL2A1-206ENST00000483376 AKR1C8PQ5T2L2 129 aa11.74□□□□□ -0.53
COL2A1-206ENST00000483376 AKAP14Q86UN6 197 aa11.74□□□□□ -0.53
COL2A1-206ENST00000483376 STOML3Q8TAV4 291 aa11.74□□□□□ -0.53
COL2A1-206ENST00000483376 RXFP4Q8TDU9 374 aa11.74□□□□□ -0.53
COL2A1-206ENST00000483376 FAM19A4Q96LR4 140 aa11.74□□□□□ -0.53
COL2A1-206ENST00000483376 HYLS1Q96M11 299 aa11.74□□□□□ -0.53
COL2A1-206ENST00000483376 TMEM167BQ9NRX6 74 aa11.74□□□□□ -0.53
COL2A1-206ENST00000483376 PPP1R14DQ9NXH3 145 aa11.74□□□□□ -0.53
COL2A1-206ENST00000483376 KMT2CQ8NEZ4 4911 aaKnown RBP11.74□□□□□ -0.53
COL2A1-206ENST00000483376 UMAD1C9J7I0 102 aa11.73□□□□□ -0.53
COL2A1-206ENST00000483376 GCHFRP30047 84 aa11.73□□□□□ -0.53
COL2A1-206ENST00000483376 LEPP41159 167 aa11.73□□□□□ -0.53
COL2A1-206ENST00000483376 CSN1S1P47710 185 aa11.73□□□□□ -0.53
COL2A1-206ENST00000483376 FAM74A1Q5RGS3 127 aa11.73□□□□□ -0.53
COL2A1-206ENST00000483376 TMUB2Q71RG4 321 aa11.73□□□□□ -0.53
COL2A1-206ENST00000483376 CT45A10P0DMU9 189 aa11.72□□□□□ -0.53
COL2A1-206ENST00000483376 CRISP2P16562 243 aa11.72□□□□□ -0.53
COL2A1-206ENST00000483376 ZNF726P1Q15940 193 aa11.72□□□□□ -0.53
COL2A1-206ENST00000483376 BAP18Q8IXM2 172 aa11.72□□□□□ -0.53
COL2A1-206ENST00000483376 TMED6Q8WW62 240 aa11.72□□□□□ -0.53
COL2A1-206ENST00000483376 ZNF471Q9BX82 626 aaPredicted RBP11.72□□□□□ -0.53
COL2A1-206ENST00000483376 AGPAT4-IT1Q9H0P7 198 aa11.72□□□□□ -0.53
COL2A1-206ENST00000483376 KLLNB2CW77 178 aa11.71□□□□□ -0.53
COL2A1-206ENST00000483376 DIRC3C9JPN6 131 aa11.71□□□□□ -0.53
COL2A1-206ENST00000483376 HMGB3O15347 200 aaKnown RBP11.71□□□□□ -0.53
COL2A1-206ENST00000483376 EIF3GO75821 320 aaKnown RBP eCLIP11.71□□□□□ -0.53
COL2A1-206ENST00000483376 HBE1P02100 147 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms