RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 S100A7P31151 101 aa9.66□□□□□ -0.86
VARS-226ENST00000483275 FUSP35637 526 aaKnown RBP eCLIP9.66□□□□□ -0.86
VARS-226ENST00000483275 PATE2Q6UY27 113 aa9.66□□□□□ -0.86
VARS-226ENST00000483275 RNASE8Q8TDE3 154 aaKnown RBP9.66□□□□□ -0.86
VARS-226ENST00000483275 TIMM8BQ9Y5J9 83 aaPredicted RBP9.66□□□□□ -0.86
VARS-226ENST00000483275 A0A087X0K7 114 aa9.65□□□□□ -0.86
VARS-226ENST00000483275 GAGE12BA1L429 117 aa9.65□□□□□ -0.86
VARS-226ENST00000483275 PMS2P5A8MQ11 134 aa9.65□□□□□ -0.86
VARS-226ENST00000483275 K7EPK0 472 aa9.65□□□□□ -0.86
VARS-226ENST00000483275 SLC17A3O00476 420 aa9.65□□□□□ -0.86
VARS-226ENST00000483275 SSNA1O43805 119 aa9.65□□□□□ -0.86
VARS-226ENST00000483275 GAGE7O76087 117 aa9.65□□□□□ -0.86
VARS-226ENST00000483275 GAGE12FP0CL80 117 aa9.65□□□□□ -0.86
VARS-226ENST00000483275 GAGE12GP0CL81 117 aa9.65□□□□□ -0.86
VARS-226ENST00000483275 GAGE12IP0CL82 117 aa9.65□□□□□ -0.86
VARS-226ENST00000483275 CAV2P51636 162 aa9.65□□□□□ -0.86
VARS-226ENST00000483275 B2MP61769 119 aa9.65□□□□□ -0.86
VARS-226ENST00000483275 TMEM14EPQ6UXP3 125 aa9.65□□□□□ -0.86
VARS-226ENST00000483275 TMEM256Q8N2U0 113 aa9.65□□□□□ -0.86
VARS-226ENST00000483275 GNPNAT1Q96EK6 184 aaPredicted RBP9.65□□□□□ -0.86
VARS-226ENST00000483275 MARVELD1Q9BSK0 173 aa9.65□□□□□ -0.86
VARS-226ENST00000483275 SCRT2Q9NQ03 307 aa9.65□□□□□ -0.86
VARS-226ENST00000483275 DNAH5Q8TE73 4624 aa9.65□□□□□ -0.87
VARS-226ENST00000483275 C7orf66A4D0T2 115 aa9.64□□□□□ -0.87
VARS-226ENST00000483275 MRPS12O15235 138 aaKnown RBP9.64□□□□□ -0.87
VARS-226ENST00000483275 RLN2P04090 185 aa9.64□□□□□ -0.87
VARS-226ENST00000483275 CDKN1BP46527 198 aa9.64□□□□□ -0.87
VARS-226ENST00000483275 GFI1BQ5VTD9 330 aa9.64□□□□□ -0.87
VARS-226ENST00000483275 MORN5Q5VZ52 161 aa9.64□□□□□ -0.87
VARS-226ENST00000483275 Q8N1X5 172 aa9.64□□□□□ -0.87
VARS-226ENST00000483275 TMEM263Q8WUH6 116 aaKnown RBP9.64□□□□□ -0.87
VARS-226ENST00000483275 Q9H8V8 135 aa9.64□□□□□ -0.87
VARS-226ENST00000483275 NPVFQ9HCQ7 196 aa9.64□□□□□ -0.87
VARS-226ENST00000483275 CYCSP99999 105 aaKnown RBP9.63□□□□□ -0.87
VARS-226ENST00000483275 RAB32Q13637 225 aa9.63□□□□□ -0.87
VARS-226ENST00000483275 ARV1Q9H2C2 271 aa9.63□□□□□ -0.87
VARS-226ENST00000483275 TMPRSS5Q9H3S3 457 aa9.63□□□□□ -0.87
VARS-226ENST00000483275 FNDC10F2Z333 226 aa9.62□□□□□ -0.87
VARS-226ENST00000483275 M6PRP20645 277 aa9.62□□□□□ -0.87
VARS-226ENST00000483275 PLP1P60201 277 aa9.62□□□□□ -0.87
VARS-226ENST00000483275 ESRGQ1W209 222 aa9.62□□□□□ -0.87
VARS-226ENST00000483275 TEPPQ6URK8 271 aa9.62□□□□□ -0.87
VARS-226ENST00000483275 S100A7AQ86SG5 101 aa9.62□□□□□ -0.87
VARS-226ENST00000483275 STX12Q86Y82 276 aa9.62□□□□□ -0.87
VARS-226ENST00000483275 GGACTQ9BVM4 153 aa9.62□□□□□ -0.87
VARS-226ENST00000483275 Q9H3A6 140 aa9.62□□□□□ -0.87
VARS-226ENST00000483275 ZNF331Q9NQX6 463 aaPredicted RBP9.62□□□□□ -0.87
VARS-226ENST00000483275 ZNF586Q9NXT0 402 aa9.62□□□□□ -0.87
VARS-226ENST00000483275 DMBT1Q9UGM3 2413 aaPredicted RBP9.61□□□□□ -0.87
VARS-226ENST00000483275 FAM24AA6NFZ4 105 aa9.61□□□□□ -0.87
VARS-226ENST00000483275 H7BYZ3 331 aa9.61□□□□□ -0.87
VARS-226ENST00000483275 SIX6O95475 246 aa9.61□□□□□ -0.87
VARS-226ENST00000483275 PTTG1O95997 202 aa9.61□□□□□ -0.87
VARS-226ENST00000483275 SELENOTP62341 195 aa9.61□□□□□ -0.87
VARS-226ENST00000483275 HBG1P69891 147 aa9.61□□□□□ -0.87
VARS-226ENST00000483275 HBG2P69892 147 aa9.61□□□□□ -0.87
VARS-226ENST00000483275 ARL16Q0P5N6 197 aa9.61□□□□□ -0.87
VARS-226ENST00000483275 ZNF493Q6ZR52 646 aa9.61□□□□□ -0.87
VARS-226ENST00000483275 LINC00305Q7Z4B0 112 aa9.61□□□□□ -0.87
VARS-226ENST00000483275 OR10J6PQ8NGY7 276 aa9.61□□□□□ -0.87
VARS-226ENST00000483275 RXFP4Q8TDU9 374 aa9.61□□□□□ -0.87
VARS-226ENST00000483275 NMES1Q9C002 83 aa9.61□□□□□ -0.87
VARS-226ENST00000483275 HERC1Q15751 4861 aa9.61□□□□□ -0.87
VARS-226ENST00000483275 TRAV12-3A0A0B4J271 114 aa9.6□□□□□ -0.87
VARS-226ENST00000483275 RAB31Q13636 194 aa9.6□□□□□ -0.87
VARS-226ENST00000483275 LRRC37A5PQ49AS3 106 aa9.6□□□□□ -0.87
VARS-226ENST00000483275 TTC32Q5I0X7 151 aa9.6□□□□□ -0.87
VARS-226ENST00000483275 LCN15Q6UWW0 184 aa9.6□□□□□ -0.87
VARS-226ENST00000483275 Q6ZTI0 123 aa9.6□□□□□ -0.87
VARS-226ENST00000483275 LINC00612Q8N6U2 182 aa9.6□□□□□ -0.87
VARS-226ENST00000483275 LYRM2Q9NU23 88 aaPredicted RBP9.6□□□□□ -0.87
VARS-226ENST00000483275 TRAV5A0A0B4J249 113 aa9.59□□□□□ -0.87
VARS-226ENST00000483275 E5RGE8 158 aa9.59□□□□□ -0.87
VARS-226ENST00000483275 H3BQ15 152 aa9.59□□□□□ -0.87
VARS-226ENST00000483275 AGPAT2O15120 278 aa9.59□□□□□ -0.87
VARS-226ENST00000483275 COX7A2P2O60397 106 aa9.59□□□□□ -0.87
VARS-226ENST00000483275 CST7O76096 145 aa9.59□□□□□ -0.87
VARS-226ENST00000483275 PET100P0DJ07 73 aa9.59□□□□□ -0.87
VARS-226ENST00000483275 S100A11P31949 105 aa9.59□□□□□ -0.87
VARS-226ENST00000483275 SULT1A1P50225 295 aa9.59□□□□□ -0.87
VARS-226ENST00000483275 LINC00315P59091 139 aa9.59□□□□□ -0.87
VARS-226ENST00000483275 IL15RAQ13261 267 aa9.59□□□□□ -0.87
VARS-226ENST00000483275 OPCMLQ14982 345 aa9.59□□□□□ -0.87
VARS-226ENST00000483275 ZNF546Q86UE3 836 aa9.59□□□□□ -0.87
VARS-226ENST00000483275 MGST2Q99735 147 aa9.59□□□□□ -0.87
VARS-226ENST00000483275 SLC25A31Q9H0C2 315 aa9.59□□□□□ -0.87
VARS-226ENST00000483275 MRPS16Q9Y3D3 137 aaKnown RBP9.59□□□□□ -0.87
VARS-226ENST00000483275 SNURFLB1AK76 121 aa9.58□□□□□ -0.88
VARS-226ENST00000483275 CT45A10P0DMU9 189 aa9.58□□□□□ -0.88
VARS-226ENST00000483275 ATP6V1FQ16864 119 aa9.58□□□□□ -0.88
VARS-226ENST00000483275 CCDC28AQ8IWP9 274 aa9.58□□□□□ -0.88
VARS-226ENST00000483275 TMEM252Q8N6L7 170 aa9.58□□□□□ -0.88
VARS-226ENST00000483275 TMEM37Q8WXS4 190 aa9.58□□□□□ -0.88
VARS-226ENST00000483275 SLC50A1Q9BRV3 221 aa9.58□□□□□ -0.88
VARS-226ENST00000483275 UQCC1Q9NVA1 299 aa9.58□□□□□ -0.88
VARS-226ENST00000483275 RNF24Q9Y225 148 aa9.58□□□□□ -0.88
VARS-226ENST00000483275 IGLC2P0DOY2 106 aa9.57□□□□□ -0.88
VARS-226ENST00000483275 CXCL2P19875 107 aa9.57□□□□□ -0.88
VARS-226ENST00000483275 BAXQ07812 192 aa9.57□□□□□ -0.88
VARS-226ENST00000483275 PXDC1Q5TGL8 231 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms