RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 SAMD5Q5TGI4 173 aa11.34□□□□□ -0.59
COL9A2-207ENST00000482722 LGALS9CQ6DKI2 356 aa11.34□□□□□ -0.59
COL9A2-207ENST00000482722 CLUHP3Q96NS8 147 aa11.34□□□□□ -0.59
COL9A2-207ENST00000482722 THBDP07204 575 aa11.33□□□□□ -0.6
COL9A2-207ENST00000482722 RIGQ13278 110 aa11.33□□□□□ -0.6
COL9A2-207ENST00000482722 TEX36Q5VZQ5 186 aa11.33□□□□□ -0.6
COL9A2-207ENST00000482722 C16orf54Q6UWD8 224 aa11.33□□□□□ -0.6
COL9A2-207ENST00000482722 GOLT1AQ6ZVE7 132 aa11.33□□□□□ -0.6
COL9A2-207ENST00000482722 PPIAL4EA0A075B759 164 aa11.33□□□□□ -0.6
COL9A2-207ENST00000482722 C16orf97H3BN30 126 aa11.33□□□□□ -0.6
COL9A2-207ENST00000482722 SIVA1O15304 175 aa11.33□□□□□ -0.6
COL9A2-207ENST00000482722 IGLV2-11P01706 119 aa11.33□□□□□ -0.6
COL9A2-207ENST00000482722 PPIAL4FP0DN26 164 aa11.33□□□□□ -0.6
COL9A2-207ENST00000482722 CDSNQ15517 529 aa11.33□□□□□ -0.6
COL9A2-207ENST00000482722 OR4C13Q8NGP0 309 aa11.33□□□□□ -0.6
COL9A2-207ENST00000482722 SIGLEC8Q9NYZ4 499 aa11.33□□□□□ -0.6
COL9A2-207ENST00000482722 FCGR2BP31994 310 aaPredicted RBP11.32□□□□□ -0.6
COL9A2-207ENST00000482722 SUB1P53999 127 aaKnown RBP eCLIP11.32□□□□□ -0.6
COL9A2-207ENST00000482722 INS-IGF2F8WCM5 200 aa11.32□□□□□ -0.6
COL9A2-207ENST00000482722 NDUFB3O43676 98 aa11.32□□□□□ -0.6
COL9A2-207ENST00000482722 CEACAM3P40198 252 aa11.32□□□□□ -0.6
COL9A2-207ENST00000482722 LINC01560Q8TB33 94 aa11.32□□□□□ -0.6
COL9A2-207ENST00000482722 LINC00574Q9H8X3 128 aa11.32□□□□□ -0.6
COL9A2-207ENST00000482722 FBLL1A6NHQ2 334 aaKnown RBP11.31□□□□□ -0.6
COL9A2-207ENST00000482722 D6R8Y8 96 aa11.31□□□□□ -0.6
COL9A2-207ENST00000482722 SIGMAR1Q99720 223 aa11.31□□□□□ -0.6
COL9A2-207ENST00000482722 ZNF207O43670 478 aaKnown RBP11.31□□□□□ -0.6
COL9A2-207ENST00000482722 SVIPQ8NHG7 77 aa11.31□□□□□ -0.6
COL9A2-207ENST00000482722 TMEM167AQ8TBQ9 72 aa11.31□□□□□ -0.6
COL9A2-207ENST00000482722 C18orf15Q96N68 181 aa11.31□□□□□ -0.6
COL9A2-207ENST00000482722 SERTM2A0A1B0GWG4 89 aa11.3□□□□□ -0.6
COL9A2-207ENST00000482722 SMIM13P0DJ93 91 aa11.3□□□□□ -0.6
COL9A2-207ENST00000482722 LYZP61626 148 aa11.3□□□□□ -0.6
COL9A2-207ENST00000482722 PSG3Q16557 428 aa11.3□□□□□ -0.6
COL9A2-207ENST00000482722 ZNF414Q96IQ9 312 aa11.3□□□□□ -0.6
COL9A2-207ENST00000482722 CELSR2Q9HCU4 2923 aa11.3□□□□□ -0.6
COL9A2-207ENST00000482722 FAM90A27PA6NNH2 459 aa11.3□□□□□ -0.6
COL9A2-207ENST00000482722 K7ERJ3 54 aa11.3□□□□□ -0.6
COL9A2-207ENST00000482722 GCSHP23434 173 aa11.3□□□□□ -0.6
COL9A2-207ENST00000482722 FXYD2P54710 66 aa11.3□□□□□ -0.6
COL9A2-207ENST00000482722 GATD1Q8NB37 220 aa11.3□□□□□ -0.6
COL9A2-207ENST00000482722 DYNLRB1Q9NP97 96 aa11.3□□□□□ -0.6
COL9A2-207ENST00000482722 CTSZQ9UBR2 303 aa11.3□□□□□ -0.6
COL9A2-207ENST00000482722 LYNX1G3V0Z9 82 aa11.3□□□□□ -0.6
COL9A2-207ENST00000482722 TMEM178BH3BS89 294 aa11.3□□□□□ -0.6
COL9A2-207ENST00000482722 NDUFS8O00217 210 aa11.3□□□□□ -0.6
COL9A2-207ENST00000482722 IGLV2-23P01705 113 aa11.3□□□□□ -0.6
COL9A2-207ENST00000482722 LYNX1P0DP58 116 aa11.3□□□□□ -0.6
COL9A2-207ENST00000482722 CNTFRP26992 372 aa11.3□□□□□ -0.6
COL9A2-207ENST00000482722 WFDC3Q8IUB2 231 aa11.3□□□□□ -0.6
COL9A2-207ENST00000482722 TSSC4Q9Y5U2 329 aaPredicted RBP11.3□□□□□ -0.6
COL9A2-207ENST00000482722 C3orf36Q3SXR2 165 aa11.29□□□□□ -0.6
COL9A2-207ENST00000482722 Q5PR19 223 aa11.29□□□□□ -0.6
COL9A2-207ENST00000482722 IGFBPL1Q8WX77 278 aa11.29□□□□□ -0.6
COL9A2-207ENST00000482722 C17orf77Q96MU5 243 aa11.29□□□□□ -0.6
COL9A2-207ENST00000482722 OTORQ9NRC9 128 aa11.29□□□□□ -0.6
COL9A2-207ENST00000482722 DKK2Q9UBU2 259 aa11.29□□□□□ -0.6
COL9A2-207ENST00000482722 TMEM189A5PLL7 270 aa11.29□□□□□ -0.6
COL9A2-207ENST00000482722 SCGB1A1P11684 91 aa11.29□□□□□ -0.6
COL9A2-207ENST00000482722 BMI1P35226 326 aa11.29□□□□□ -0.6
COL9A2-207ENST00000482722 BCL6BQ8N143 479 aaPredicted RBP11.29□□□□□ -0.6
COL9A2-207ENST00000482722 NUP37Q8NFH4 326 aa11.29□□□□□ -0.6
COL9A2-207ENST00000482722 MYO18BQ8IUG5 2567 aa11.28□□□□□ -0.6
COL9A2-207ENST00000482722 A0A1W2PRD5 423 aa11.28□□□□□ -0.6
COL9A2-207ENST00000482722 A0A1W2PRF3 423 aa11.28□□□□□ -0.6
COL9A2-207ENST00000482722 A0A1W2PRM7 423 aa11.28□□□□□ -0.6
COL9A2-207ENST00000482722 LY6DQ14210 128 aa11.28□□□□□ -0.6
COL9A2-207ENST00000482722 TMEM30BQ3MIR4 351 aa11.28□□□□□ -0.6
COL9A2-207ENST00000482722 IFI27L1Q96BM0 104 aa11.28□□□□□ -0.6
COL9A2-207ENST00000482722 PRELID3AQ96N28 172 aa11.28□□□□□ -0.6
COL9A2-207ENST00000482722 TRGV9Q99603 122 aa11.28□□□□□ -0.6
COL9A2-207ENST00000482722 TTTY13Q9BZ97 58 aa11.28□□□□□ -0.6
COL9A2-207ENST00000482722 SMPXQ9UHP9 88 aa11.28□□□□□ -0.6
COL9A2-207ENST00000482722 TMSB15BA0A087X1C1 80 aa11.28□□□□□ -0.6
COL9A2-207ENST00000482722 VMA21Q3ZAQ7 101 aa11.28□□□□□ -0.6
COL9A2-207ENST00000482722 MSRB2Q9Y3D2 182 aa11.28□□□□□ -0.6
COL9A2-207ENST00000482722 TMEM213A2RRL7 107 aa11.27□□□□□ -0.6
COL9A2-207ENST00000482722 GAGE12HA6NDE8 117 aa11.27□□□□□ -0.6
COL9A2-207ENST00000482722 HBDP02042 147 aa11.27□□□□□ -0.6
COL9A2-207ENST00000482722 AMN1Q8IY45 258 aa11.27□□□□□ -0.6
COL9A2-207ENST00000482722 C8orf46Q8TAG6 207 aa11.27□□□□□ -0.6
COL9A2-207ENST00000482722 VGLL1Q99990 258 aa11.27□□□□□ -0.6
COL9A2-207ENST00000482722 CRYGCP07315 174 aa11.27□□□□□ -0.61
COL9A2-207ENST00000482722 HOXB4P17483 251 aaPredicted RBP11.27□□□□□ -0.61
COL9A2-207ENST00000482722 CRIP1P50238 77 aa11.27□□□□□ -0.61
COL9A2-207ENST00000482722 IGKV2D-26A0A0A0MRZ7 120 aa11.26□□□□□ -0.61
COL9A2-207ENST00000482722 LY6HO94772 140 aa11.26□□□□□ -0.61
COL9A2-207ENST00000482722 LOXP28300 417 aaPredicted RBP11.26□□□□□ -0.61
COL9A2-207ENST00000482722 CD300EQ496F6 205 aaPredicted RBP11.26□□□□□ -0.61
COL9A2-207ENST00000482722 IGSF10Q6WRI0 2623 aa11.26□□□□□ -0.61
COL9A2-207ENST00000482722 A0A1B0GW15 77 aa11.26□□□□□ -0.61
COL9A2-207ENST00000482722 WFDC2Q14508 124 aa11.26□□□□□ -0.61
COL9A2-207ENST00000482722 MRGPRG-AS1Q2M3A8 158 aa11.26□□□□□ -0.61
COL9A2-207ENST00000482722 HIGD1AQ9Y241 93 aa11.26□□□□□ -0.61
COL9A2-207ENST00000482722 A0A1B0GV72 72 aa11.26□□□□□ -0.61
COL9A2-207ENST00000482722 K7EMI3 77 aa11.26□□□□□ -0.61
COL9A2-207ENST00000482722 NDUFS7O75251 213 aa11.26□□□□□ -0.61
COL9A2-207ENST00000482722 PAX8Q06710 450 aa11.26□□□□□ -0.61
COL9A2-207ENST00000482722 ZNF493Q6ZR52 646 aa11.26□□□□□ -0.61
COL9A2-207ENST00000482722 ATP6V0BQ99437 205 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms