RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 CCDC32Q9BV29 185 aa9.47□□□□□ -0.89
CTDSP1-208ENST00000482272 WDR83OSQ9Y284 106 aa9.47□□□□□ -0.89
CTDSP1-208ENST00000482272 FAM240BA0A1B0GVZ2 78 aa9.46□□□□□ -0.9
CTDSP1-208ENST00000482272 H3BTX0 84 aa9.46□□□□□ -0.9
CTDSP1-208ENST00000482272 SLC17A3O00476 420 aa9.46□□□□□ -0.9
CTDSP1-208ENST00000482272 NUDT3O95989 172 aa9.46□□□□□ -0.9
CTDSP1-208ENST00000482272 IGLC2P0DOY2 106 aa9.46□□□□□ -0.9
CTDSP1-208ENST00000482272 RPL29P47914 159 aaKnown RBP9.46□□□□□ -0.9
CTDSP1-208ENST00000482272 S100A10P60903 97 aa9.46□□□□□ -0.9
CTDSP1-208ENST00000482272 HBG1P69891 147 aa9.46□□□□□ -0.9
CTDSP1-208ENST00000482272 HBG2P69892 147 aa9.46□□□□□ -0.9
CTDSP1-208ENST00000482272 KIR3DS1Q14943 382 aa9.46□□□□□ -0.9
CTDSP1-208ENST00000482272 ATP6V1FQ16864 119 aa9.46□□□□□ -0.9
CTDSP1-208ENST00000482272 C1orf134Q5TEV5 83 aa9.46□□□□□ -0.9
CTDSP1-208ENST00000482272 MZT2BQ6NZ67 158 aa9.46□□□□□ -0.9
CTDSP1-208ENST00000482272 STX12Q86Y82 276 aa9.46□□□□□ -0.9
CTDSP1-208ENST00000482272 TMEM263Q8WUH6 116 aaKnown RBP9.46□□□□□ -0.9
CTDSP1-208ENST00000482272 SAT2Q96F10 170 aaPredicted RBP9.46□□□□□ -0.9
CTDSP1-208ENST00000482272 LYRM2Q9NU23 88 aaPredicted RBP9.46□□□□□ -0.9
CTDSP1-208ENST00000482272 NACAE9PAV3 2078 aa9.46□□□□□ -0.9
CTDSP1-208ENST00000482272 KIAA1109Q2LD37 5005 aa9.45□□□□□ -0.9
CTDSP1-208ENST00000482272 TRAV5A0A0B4J249 113 aa9.45□□□□□ -0.9
CTDSP1-208ENST00000482272 PRAC2D3DTV9 90 aa9.45□□□□□ -0.9
CTDSP1-208ENST00000482272 H3BQ15 152 aa9.45□□□□□ -0.9
CTDSP1-208ENST00000482272 CCL18P55774 89 aa9.45□□□□□ -0.9
CTDSP1-208ENST00000482272 BAXQ07812 192 aa9.45□□□□□ -0.9
CTDSP1-208ENST00000482272 IL15RAQ13261 267 aa9.45□□□□□ -0.9
CTDSP1-208ENST00000482272 VWC2Q2TAL6 325 aa9.45□□□□□ -0.9
CTDSP1-208ENST00000482272 TMEM252Q8N6L7 170 aa9.45□□□□□ -0.9
CTDSP1-208ENST00000482272 RNASE8Q8TDE3 154 aaKnown RBP9.45□□□□□ -0.9
CTDSP1-208ENST00000482272 PARD6GQ9BYG4 376 aaPredicted RBP9.45□□□□□ -0.9
CTDSP1-208ENST00000482272 NOP10Q9NPE3 64 aaKnown RBP9.45□□□□□ -0.9
CTDSP1-208ENST00000482272 SLC39A9Q9NUM3 307 aa9.45□□□□□ -0.9
CTDSP1-208ENST00000482272 ZNF253O75346 499 aa9.44□□□□□ -0.9
CTDSP1-208ENST00000482272 MED14OSP0DP75 135 aa9.44□□□□□ -0.9
CTDSP1-208ENST00000482272 LEPP41159 167 aa9.44□□□□□ -0.9
CTDSP1-208ENST00000482272 RAB32Q13637 225 aa9.44□□□□□ -0.9
CTDSP1-208ENST00000482272 LINC00299Q6ZSB3 139 aa9.44□□□□□ -0.9
CTDSP1-208ENST00000482272 CHAC2Q8WUX2 184 aa9.44□□□□□ -0.9
CTDSP1-208ENST00000482272 PKHD1P08F94 4074 aa9.44□□□□□ -0.9
CTDSP1-208ENST00000482272 UBE2L5PA0A1B0GUS4 154 aa9.43□□□□□ -0.9
CTDSP1-208ENST00000482272 IGSF23A1L1A6 192 aa9.43□□□□□ -0.9
CTDSP1-208ENST00000482272 SNURFLB1AK76 121 aa9.43□□□□□ -0.9
CTDSP1-208ENST00000482272 MPDU1O75352 247 aa9.43□□□□□ -0.9
CTDSP1-208ENST00000482272 GFI1BQ5VTD9 330 aa9.43□□□□□ -0.9
CTDSP1-208ENST00000482272 ODF3Q96PU9 254 aa9.43□□□□□ -0.9
CTDSP1-208ENST00000482272 ZNF586Q9NXT0 402 aa9.43□□□□□ -0.9
CTDSP1-208ENST00000482272 J3KRW8 73 aa9.42□□□□□ -0.9
CTDSP1-208ENST00000482272 RLN2P04090 185 aa9.42□□□□□ -0.9
CTDSP1-208ENST00000482272 CT45A10P0DMU9 189 aa9.42□□□□□ -0.9
CTDSP1-208ENST00000482272 FGF7P21781 194 aa9.42□□□□□ -0.9
CTDSP1-208ENST00000482272 OR5I1Q13606 314 aa9.42□□□□□ -0.9
CTDSP1-208ENST00000482272 CLINT1Q14677 625 aa9.42□□□□□ -0.9
CTDSP1-208ENST00000482272 S100ZQ8WXG8 99 aa9.42□□□□□ -0.9
CTDSP1-208ENST00000482272 MRPL53Q96EL3 112 aaKnown RBP9.42□□□□□ -0.9
CTDSP1-208ENST00000482272 GPN1Q9HCN4 374 aaPredicted RBP9.42□□□□□ -0.9
CTDSP1-208ENST00000482272 TMEM14CQ9P0S9 112 aa9.42□□□□□ -0.9
CTDSP1-208ENST00000482272 TIMM9Q9Y5J7 89 aa9.42□□□□□ -0.9
CTDSP1-208ENST00000482272 DYNC1H1Q14204 4646 aaKnown RBP9.42□□□□□ -0.9
CTDSP1-208ENST00000482272 TRBV19A0A075B6N1 114 aa9.41□□□□□ -0.9
CTDSP1-208ENST00000482272 TRAV12-3A0A0B4J271 114 aa9.41□□□□□ -0.9
CTDSP1-208ENST00000482272 NPIPB6E9PJ23 425 aa9.41□□□□□ -0.9
CTDSP1-208ENST00000482272 HIST1H1EP10412 219 aaKnown RBP9.41□□□□□ -0.9
CTDSP1-208ENST00000482272 IFITM3Q01628 133 aa9.41□□□□□ -0.9
CTDSP1-208ENST00000482272 RNF141Q8WVD5 230 aa9.41□□□□□ -0.9
CTDSP1-208ENST00000482272 PYGO2Q9BRQ0 406 aa9.41□□□□□ -0.9
CTDSP1-208ENST00000482272 PRELID1Q9Y255 219 aa9.41□□□□□ -0.9
CTDSP1-208ENST00000482272 NBDYA0A0U1RRE5 68 aa9.4□□□□□ -0.9
CTDSP1-208ENST00000482272 SLC25A5P05141 298 aaKnown RBP9.4□□□□□ -0.9
CTDSP1-208ENST00000482272 ASAH1Q13510 395 aa9.4□□□□□ -0.9
CTDSP1-208ENST00000482272 PDE6HQ13956 83 aa9.4□□□□□ -0.9
CTDSP1-208ENST00000482272 LINC00612Q8N6U2 182 aa9.4□□□□□ -0.9
CTDSP1-208ENST00000482272 ZNRF2Q8NHG8 242 aa9.4□□□□□ -0.9
CTDSP1-208ENST00000482272 GNPNAT1Q96EK6 184 aaPredicted RBP9.4□□□□□ -0.9
CTDSP1-208ENST00000482272 LINC00477Q96M19 166 aa9.4□□□□□ -0.9
CTDSP1-208ENST00000482272 NPCDR1Q9BY65 106 aa9.4□□□□□ -0.9
CTDSP1-208ENST00000482272 SLC25A31Q9H0C2 315 aa9.4□□□□□ -0.9
CTDSP1-208ENST00000482272 AAMDCQ9H7C9 122 aa9.4□□□□□ -0.9
CTDSP1-208ENST00000482272 LINC00588Q9Y4M8 146 aa9.4□□□□□ -0.9
CTDSP1-208ENST00000482272 GAGE12BA1L429 117 aa9.39□□□□□ -0.91
CTDSP1-208ENST00000482272 E5RGE8 158 aa9.39□□□□□ -0.91
CTDSP1-208ENST00000482272 GAGE7O76087 117 aa9.39□□□□□ -0.91
CTDSP1-208ENST00000482272 SIX6O95475 246 aa9.39□□□□□ -0.91
CTDSP1-208ENST00000482272 GAGE12FP0CL80 117 aa9.39□□□□□ -0.91
CTDSP1-208ENST00000482272 GAGE12GP0CL81 117 aa9.39□□□□□ -0.91
CTDSP1-208ENST00000482272 GAGE12IP0CL82 117 aa9.39□□□□□ -0.91
CTDSP1-208ENST00000482272 NHLH2Q02577 135 aa9.39□□□□□ -0.91
CTDSP1-208ENST00000482272 GCSAMLQ5JQS6 135 aa9.39□□□□□ -0.91
CTDSP1-208ENST00000482272 ENKURQ8TC29 256 aa9.39□□□□□ -0.91
CTDSP1-208ENST00000482272 BLNKQ8WV28 456 aa9.39□□□□□ -0.91
CTDSP1-208ENST00000482272 ZNF503Q96F45 646 aa9.39□□□□□ -0.91
CTDSP1-208ENST00000482272 DNAH11Q96DT5 4516 aa9.39□□□□□ -0.91
CTDSP1-208ENST00000482272 TRAV26-1A0A087WT03 109 aa9.38□□□□□ -0.91
CTDSP1-208ENST00000482272 C7orf71A4D174 169 aa9.38□□□□□ -0.91
CTDSP1-208ENST00000482272 M0R3E3 92 aa9.38□□□□□ -0.91
CTDSP1-208ENST00000482272 NDUFB4O95168 129 aa9.38□□□□□ -0.91
CTDSP1-208ENST00000482272 PYYP10082 97 aa9.38□□□□□ -0.91
CTDSP1-208ENST00000482272 M6PRP20645 277 aa9.38□□□□□ -0.91
CTDSP1-208ENST00000482272 CYCSP99999 105 aaKnown RBP9.38□□□□□ -0.91
CTDSP1-208ENST00000482272 DAZ2Q13117 558 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms