RNA–Protein interactions for RNA: ENST00000481655.2

CTCFL-210, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 1,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-210ENST00000481655 ZNF738Q8NE65 137 aa11.17□□□□□ -0.62
CTCFL-210ENST00000481655 MED9Q9NWA0 146 aa11.17□□□□□ -0.62
CTCFL-210ENST00000481655 RAB19A4D1S5 217 aa11.16□□□□□ -0.62
CTCFL-210ENST00000481655 K7EQM0 130 aa11.16□□□□□ -0.62
CTCFL-210ENST00000481655 BEAN1Q3B7T3 259 aa11.16□□□□□ -0.62
CTCFL-210ENST00000481655 ZNF506Q5JVG8 444 aa11.16□□□□□ -0.62
CTCFL-210ENST00000481655 HIST1H2BAQ96A08 127 aa11.16□□□□□ -0.62
CTCFL-210ENST00000481655 RPUSD4Q96CM3 377 aaKnown RBP11.16□□□□□ -0.62
CTCFL-210ENST00000481655 FAM110AQ9BQ89 295 aa11.16□□□□□ -0.62
CTCFL-210ENST00000481655 SMDT1Q9H4I9 107 aa11.16□□□□□ -0.62
CTCFL-210ENST00000481655 NOTCH3Q9UM47 2321 aa11.16□□□□□ -0.62
CTCFL-210ENST00000481655 SERTM2A0A1B0GWG4 89 aa11.15□□□□□ -0.62
CTCFL-210ENST00000481655 OR11H12B2RN74 326 aa11.15□□□□□ -0.62
CTCFL-210ENST00000481655 M0R3E3 92 aa11.15□□□□□ -0.62
CTCFL-210ENST00000481655 ATP5G3P48201 142 aa11.15□□□□□ -0.62
CTCFL-210ENST00000481655 FAM24BQ8N5W8 94 aa11.15□□□□□ -0.62
CTCFL-210ENST00000481655 EPDR1Q9UM22 224 aa11.15□□□□□ -0.62
CTCFL-210ENST00000481655 CMYA5Q8N3K9 4069 aa11.15□□□□□ -0.62
CTCFL-210ENST00000481655 LINC00862A6NCI5 91 aa11.14□□□□□ -0.63
CTCFL-210ENST00000481655 NDUFS6O75380 124 aaKnown RBP11.14□□□□□ -0.63
CTCFL-210ENST00000481655 DEFB131AP59861 70 aa11.14□□□□□ -0.63
CTCFL-210ENST00000481655 CD81P60033 236 aa11.14□□□□□ -0.63
CTCFL-210ENST00000481655 EBLN2Q6P2I7 272 aa11.14□□□□□ -0.63
CTCFL-210ENST00000481655 CCDC28AQ8IWP9 274 aa11.14□□□□□ -0.63
CTCFL-210ENST00000481655 RARRES2Q99969 163 aa11.14□□□□□ -0.63
CTCFL-210ENST00000481655 ATG101Q9BSB4 218 aa11.14□□□□□ -0.63
CTCFL-210ENST00000481655 MAP6D1Q9H9H5 199 aa11.14□□□□□ -0.63
CTCFL-210ENST00000481655 RPH3ALQ9UNE2 315 aa11.14□□□□□ -0.63
CTCFL-210ENST00000481655 DIRC3C9JPN6 131 aa11.14□□□□□ -0.63
CTCFL-210ENST00000481655 PEX7O00628 323 aa11.14□□□□□ -0.63
CTCFL-210ENST00000481655 TCRAP04437 139 aa11.14□□□□□ -0.63
CTCFL-210ENST00000481655 HLA-DMBP28068 263 aa11.14□□□□□ -0.63
CTCFL-210ENST00000481655 COMMD7Q86VX2 200 aa11.14□□□□□ -0.63
CTCFL-210ENST00000481655 OR10J6PQ8NGY7 276 aa11.14□□□□□ -0.63
CTCFL-210ENST00000481655 C20orf173Q96LM9 149 aa11.14□□□□□ -0.63
CTCFL-210ENST00000481655 FBLL1A6NHQ2 334 aaKnown RBP11.13□□□□□ -0.63
CTCFL-210ENST00000481655 EGFEM1PQ0D2K5 195 aa11.13□□□□□ -0.63
CTCFL-210ENST00000481655 SAMD5Q5TGI4 173 aa11.13□□□□□ -0.63
CTCFL-210ENST00000481655 FOXI2Q6ZQN5 318 aa11.13□□□□□ -0.63
CTCFL-210ENST00000481655 CYB561D1Q8N8Q1 229 aa11.13□□□□□ -0.63
CTCFL-210ENST00000481655 ZNF705FA8MVS1 300 aaPredicted RBP11.12□□□□□ -0.63
CTCFL-210ENST00000481655 TMEM250H0YL14 139 aa11.12□□□□□ -0.63
CTCFL-210ENST00000481655 CNN1P51911 297 aaKnown RBP11.12□□□□□ -0.63
CTCFL-210ENST00000481655 NDUFA5Q16718 116 aa11.12□□□□□ -0.63
CTCFL-210ENST00000481655 ODF3L2Q3SX64 289 aa11.12□□□□□ -0.63
CTCFL-210ENST00000481655 UQCC3Q6UW78 93 aa11.12□□□□□ -0.63
CTCFL-210ENST00000481655 TREM1Q9NP99 234 aa11.12□□□□□ -0.63
CTCFL-210ENST00000481655 RBAKDNA6NC62 111 aa11.11□□□□□ -0.63
CTCFL-210ENST00000481655 G3V4G9 280 aa11.11□□□□□ -0.63
CTCFL-210ENST00000481655 DUSP14O95147 198 aaKnown RBP11.11□□□□□ -0.63
CTCFL-210ENST00000481655 S100A9P06702 114 aaKnown RBP11.11□□□□□ -0.63
CTCFL-210ENST00000481655 CD7P09564 240 aa11.11□□□□□ -0.63
CTCFL-210ENST00000481655 AKR1C3P42330 323 aa11.11□□□□□ -0.63
CTCFL-210ENST00000481655 GNG5P63218 68 aa11.11□□□□□ -0.63
CTCFL-210ENST00000481655 GOLT1AQ6ZVE7 132 aa11.11□□□□□ -0.63
CTCFL-210ENST00000481655 OR8A1Q8NGG7 326 aa11.11□□□□□ -0.63
CTCFL-210ENST00000481655 C11orf52Q96A22 123 aa11.11□□□□□ -0.63
CTCFL-210ENST00000481655 SCO2A0A1W2PP80 73 aa11.1□□□□□ -0.63
CTCFL-210ENST00000481655 PRAC2D3DTV9 90 aa11.1□□□□□ -0.63
CTCFL-210ENST00000481655 UBE2G1P62253 170 aa11.1□□□□□ -0.63
CTCFL-210ENST00000481655 HIST1H1AQ02539 215 aaPredicted RBP11.1□□□□□ -0.63
CTCFL-210ENST00000481655 TMEM78Q5T7P6 136 aa11.1□□□□□ -0.63
CTCFL-210ENST00000481655 SAV1Q9H4B6 383 aaPredicted RBP11.1□□□□□ -0.63
CTCFL-210ENST00000481655 IGKV2-40A0A087WW87 121 aaPredicted RBP11.09□□□□□ -0.63
CTCFL-210ENST00000481655 IGKV2D-40P01614 121 aaPredicted RBP11.09□□□□□ -0.63
CTCFL-210ENST00000481655 ACTL10Q5JWF8 245 aa11.09□□□□□ -0.63
CTCFL-210ENST00000481655 APRG1Q8IVJ8 170 aa11.09□□□□□ -0.63
CTCFL-210ENST00000481655 STHQ8IWL8 128 aa11.09□□□□□ -0.63
CTCFL-210ENST00000481655 EIF4E3Q8N5X7 224 aaKnown RBP11.09□□□□□ -0.63
CTCFL-210ENST00000481655 TMEM75Q8N9X5 138 aa11.09□□□□□ -0.63
CTCFL-210ENST00000481655 SLC35B3Q9H1N7 401 aa11.09□□□□□ -0.63
CTCFL-210ENST00000481655 PPP1R14DQ9NXH3 145 aa11.09□□□□□ -0.63
CTCFL-210ENST00000481655 A0A0J9YX75 114 aa11.09□□□□□ -0.63
CTCFL-210ENST00000481655 HLA-DRB4P13762 266 aa11.09□□□□□ -0.63
CTCFL-210ENST00000481655 CEBPGP53567 150 aa11.09□□□□□ -0.63
CTCFL-210ENST00000481655 FMC1Q96HJ9 113 aa11.09□□□□□ -0.63
CTCFL-210ENST00000481655 LINC00477Q96M19 166 aa11.09□□□□□ -0.63
CTCFL-210ENST00000481655 HLA-DRB4X5D2U9 266 aa11.09□□□□□ -0.63
CTCFL-210ENST00000481655 PKD1L1Q8TDX9 2849 aa11.08□□□□□ -0.64
CTCFL-210ENST00000481655 F6UB75 175 aa11.08□□□□□ -0.64
CTCFL-210ENST00000481655 SRP19P09132 144 aaKnown RBP11.08□□□□□ -0.64
CTCFL-210ENST00000481655 SRSF3P84103 164 aaKnown RBP11.08□□□□□ -0.64
CTCFL-210ENST00000481655 C9orf47Q6ZRZ4 202 aa11.08□□□□□ -0.64
CTCFL-210ENST00000481655 C2CD4CQ8TF44 421 aa11.08□□□□□ -0.64
CTCFL-210ENST00000481655 PRR25Q96S07 402 aa11.08□□□□□ -0.64
CTCFL-210ENST00000481655 NDFIP1Q9BT67 221 aa11.08□□□□□ -0.64
CTCFL-210ENST00000481655 KNCNA6PVL3 124 aa11.07□□□□□ -0.64
CTCFL-210ENST00000481655 NPIPB6E9PJ23 425 aa11.07□□□□□ -0.64
CTCFL-210ENST00000481655 RPL35P42766 123 aaKnown RBP11.07□□□□□ -0.64
CTCFL-210ENST00000481655 KRTAP10-11P60412 298 aa11.07□□□□□ -0.64
CTCFL-210ENST00000481655 FLI1Q01543 452 aaPredicted RBP11.07□□□□□ -0.64
CTCFL-210ENST00000481655 TMEM183BQ1AE95 376 aa11.07□□□□□ -0.64
CTCFL-210ENST00000481655 OR4B1Q8NGF8 309 aa11.07□□□□□ -0.64
CTCFL-210ENST00000481655 VGLL1Q99990 258 aa11.07□□□□□ -0.64
CTCFL-210ENST00000481655 C19orf73Q9NVV2 129 aa11.07□□□□□ -0.64
CTCFL-210ENST00000481655 KLF12Q9Y4X4 402 aa11.07□□□□□ -0.64
CTCFL-210ENST00000481655 MGAM2Q2M2H8 2515 aa11.07□□□□□ -0.64
CTCFL-210ENST00000481655 H3BMM0 161 aa11.06□□□□□ -0.64
CTCFL-210ENST00000481655 ZNF705DP0CH99 300 aaPredicted RBP11.06□□□□□ -0.64
CTCFL-210ENST00000481655 ZNF705BP0CI00 300 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms