RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 FCN3O75636 299 aa7.65□□□□□ -1.19
GARNL3-216ENST00000481242 IGKV1-16P04430 117 aa7.65□□□□□ -1.19
GARNL3-216ENST00000481242 FAM90A2PQ658T7 463 aa7.65□□□□□ -1.19
GARNL3-216ENST00000481242 TEX43Q6ZNM6 134 aa7.65□□□□□ -1.19
GARNL3-216ENST00000481242 TMEM14BQ9NUH8 114 aa7.65□□□□□ -1.19
GARNL3-216ENST00000481242 TECTAO75443 2155 aa7.65□□□□□ -1.19
GARNL3-216ENST00000481242 TRGV1A0A0A0MS02 117 aa7.64□□□□□ -1.19
GARNL3-216ENST00000481242 TRAV5A0A0B4J249 113 aa7.64□□□□□ -1.19
GARNL3-216ENST00000481242 TRBV7-9A0A0J9YWB2 115 aa7.64□□□□□ -1.19
GARNL3-216ENST00000481242 VCYO14598 125 aa7.64□□□□□ -1.19
GARNL3-216ENST00000481242 ATP6V0E1O15342 81 aa7.64□□□□□ -1.19
GARNL3-216ENST00000481242 DPM2O94777 84 aa7.64□□□□□ -1.19
GARNL3-216ENST00000481242 NDUFA4O00483 81 aa7.64□□□□□ -1.19
GARNL3-216ENST00000481242 RNASE8Q8TDE3 154 aaKnown RBP7.64□□□□□ -1.19
GARNL3-216ENST00000481242 SHANK1Q9Y566 2161 aa7.64□□□□□ -1.19
GARNL3-216ENST00000481242 MYLKQ15746 1914 aa7.64□□□□□ -1.19
GARNL3-216ENST00000481242 NTF4P34130 210 aa7.64□□□□□ -1.19
GARNL3-216ENST00000481242 SPATA31B1PQ5VZV4 182 aa7.64□□□□□ -1.19
GARNL3-216ENST00000481242 RNF138Q8WVD3 245 aa7.64□□□□□ -1.19
GARNL3-216ENST00000481242 MRPL27Q9P0M9 148 aaKnown RBP7.64□□□□□ -1.19
GARNL3-216ENST00000481242 ANAPC1Q9H1A4 1944 aa7.64□□□□□ -1.19
GARNL3-216ENST00000481242 IGKV2-40A0A087WW87 121 aaPredicted RBP7.64□□□□□ -1.19
GARNL3-216ENST00000481242 WISP1O95388 367 aa7.64□□□□□ -1.19
GARNL3-216ENST00000481242 IGKV2D-40P01614 121 aaPredicted RBP7.64□□□□□ -1.19
GARNL3-216ENST00000481242 NDUFA4L2Q9NRX3 87 aa7.64□□□□□ -1.19
GARNL3-216ENST00000481242 LHFPL4Q7Z7J7 247 aa7.63□□□□□ -1.19
GARNL3-216ENST00000481242 FANCMQ8IYD8 2048 aa7.63□□□□□ -1.19
GARNL3-216ENST00000481242 NOTCH4Q99466 2003 aa7.63□□□□□ -1.19
GARNL3-216ENST00000481242 NUP210Q8TEM1 1887 aaPredicted RBP7.63□□□□□ -1.19
GARNL3-216ENST00000481242 IGLC2P0DOY2 106 aa7.63□□□□□ -1.19
GARNL3-216ENST00000481242 IGLC3P0DOY3 106 aa7.63□□□□□ -1.19
GARNL3-216ENST00000481242 Q0VG73 95 aa7.63□□□□□ -1.19
GARNL3-216ENST00000481242 SLC25A2Q9BXI2 301 aa7.63□□□□□ -1.19
GARNL3-216ENST00000481242 GAGE12HA6NDE8 117 aa7.63□□□□□ -1.19
GARNL3-216ENST00000481242 F8W1H4 67 aa7.63□□□□□ -1.19
GARNL3-216ENST00000481242 AZU1P20160 251 aa7.63□□□□□ -1.19
GARNL3-216ENST00000481242 EXOC3-AS1Q8N2X6 119 aa7.63□□□□□ -1.19
GARNL3-216ENST00000481242 RNASE1P07998 156 aaKnown RBP7.63□□□□□ -1.19
GARNL3-216ENST00000481242 APOC4P55056 127 aa7.63□□□□□ -1.19
GARNL3-216ENST00000481242 SSBP2P81877 361 aaPredicted RBP7.63□□□□□ -1.19
GARNL3-216ENST00000481242 PLXNA2O75051 1894 aa7.62□□□□□ -1.19
GARNL3-216ENST00000481242 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.62□□□□□ -1.19
GARNL3-216ENST00000481242 DEFB131AP59861 70 aa7.62□□□□□ -1.19
GARNL3-216ENST00000481242 RUSC1-AS1Q66K80 236 aa7.62□□□□□ -1.19
GARNL3-216ENST00000481242 TRAV12-3A0A0B4J271 114 aa7.62□□□□□ -1.19
GARNL3-216ENST00000481242 GAGE12JA6NER3 117 aa7.62□□□□□ -1.19
GARNL3-216ENST00000481242 PGPEP1LA6NFU8 196 aa7.62□□□□□ -1.19
GARNL3-216ENST00000481242 GAGE7O76087 117 aa7.62□□□□□ -1.19
GARNL3-216ENST00000481242 GAGE12FP0CL80 117 aa7.62□□□□□ -1.19
GARNL3-216ENST00000481242 GAGE12GP0CL81 117 aa7.62□□□□□ -1.19
GARNL3-216ENST00000481242 GAGE12IP0CL82 117 aa7.62□□□□□ -1.19
GARNL3-216ENST00000481242 RPL35AP18077 110 aaKnown RBP7.62□□□□□ -1.19
GARNL3-216ENST00000481242 ADMP35318 185 aa7.62□□□□□ -1.19
GARNL3-216ENST00000481242 GAGE4Q13068 117 aa7.62□□□□□ -1.19
GARNL3-216ENST00000481242 LAGE3Q14657 143 aa7.62□□□□□ -1.19
GARNL3-216ENST00000481242 DAZAP2Q15038 168 aaPredicted RBP7.62□□□□□ -1.19
GARNL3-216ENST00000481242 MST1LQ2TV78 715 aa7.62□□□□□ -1.19
GARNL3-216ENST00000481242 ZNF876PQ49A33 203 aa7.62□□□□□ -1.19
GARNL3-216ENST00000481242 ATOH7Q8N100 152 aa7.62□□□□□ -1.19
GARNL3-216ENST00000481242 DEFB113Q30KQ7 82 aa7.62□□□□□ -1.19
GARNL3-216ENST00000481242 IFI27L1Q96BM0 104 aa7.62□□□□□ -1.19
GARNL3-216ENST00000481242 HEATR5AQ86XA9 2040 aa7.62□□□□□ -1.19
GARNL3-216ENST00000481242 FAM231BA6NCW3 169 aa7.62□□□□□ -1.19
GARNL3-216ENST00000481242 K7EP34 96 aa7.62□□□□□ -1.19
GARNL3-216ENST00000481242 CCL25O15444 150 aa7.62□□□□□ -1.19
GARNL3-216ENST00000481242 NDPQ00604 133 aa7.62□□□□□ -1.19
GARNL3-216ENST00000481242 C17orf58Q2M2W7 97 aa7.62□□□□□ -1.19
GARNL3-216ENST00000481242 VOPP1Q96AW1 172 aa7.62□□□□□ -1.19
GARNL3-216ENST00000481242 C1orf147Q96MC9 270 aaPredicted RBP7.62□□□□□ -1.19
GARNL3-216ENST00000481242 TMEM126AQ9H061 195 aa7.62□□□□□ -1.19
GARNL3-216ENST00000481242 PPIFP30405 207 aaKnown RBP7.61□□□□□ -1.19
GARNL3-216ENST00000481242 IGKV1-6A0A0C4DH72 117 aa7.61□□□□□ -1.19
GARNL3-216ENST00000481242 VSIRQ9H7M9 311 aa7.61□□□□□ -1.19
GARNL3-216ENST00000481242 DKK4Q9UBT3 224 aa7.61□□□□□ -1.19
GARNL3-216ENST00000481242 HIVEP2P31629 2446 aa7.61□□□□□ -1.19
GARNL3-216ENST00000481242 C9orf118A6NHY6 69 aa7.61□□□□□ -1.19
GARNL3-216ENST00000481242 A8MWV9 139 aa7.61□□□□□ -1.19
GARNL3-216ENST00000481242 TSPAN13O95857 204 aa7.61□□□□□ -1.19
GARNL3-216ENST00000481242 RNF144BQ7Z419 303 aa7.61□□□□□ -1.19
GARNL3-216ENST00000481242 Q8NFD4 153 aa7.61□□□□□ -1.19
GARNL3-216ENST00000481242 PLEKHB2Q96CS7 222 aa7.61□□□□□ -1.19
GARNL3-216ENST00000481242 SHISA9B4DS77 424 aa7.61□□□□□ -1.19
GARNL3-216ENST00000481242 VPREB3Q9UKI3 123 aa7.61□□□□□ -1.19
GARNL3-216ENST00000481242 IGLV3-1P01715 115 aa7.6□□□□□ -1.19
GARNL3-216ENST00000481242 TCTEX1D4Q5JR98 221 aa7.6□□□□□ -1.19
GARNL3-216ENST00000481242 RASL10AQ92737 203 aa7.6□□□□□ -1.19
GARNL3-216ENST00000481242 GFRA4Q9GZZ7 299 aa7.6□□□□□ -1.19
GARNL3-216ENST00000481242 SH2D1AO60880 128 aa7.6□□□□□ -1.19
GARNL3-216ENST00000481242 NDUFA3O95167 84 aa7.6□□□□□ -1.19
GARNL3-216ENST00000481242 ZNF479Q96JC4 524 aa7.6□□□□□ -1.19
GARNL3-216ENST00000481242 MPV17L2Q567V2 206 aa7.6□□□□□ -1.19
GARNL3-216ENST00000481242 LYZL1Q6UWQ5 148 aa7.6□□□□□ -1.19
GARNL3-216ENST00000481242 Q6ZRM9 215 aa7.6□□□□□ -1.19
GARNL3-216ENST00000481242 IL17RELQ6ZVW7 336 aa7.6□□□□□ -1.19
GARNL3-216ENST00000481242 WT1P19544 449 aaPredicted RBP7.59□□□□□ -1.19
GARNL3-216ENST00000481242 WDR86Q86TI4 376 aa7.59□□□□□ -1.19
GARNL3-216ENST00000481242 SONP18583 2426 aaKnown RBP7.59□□□□□ -1.19
GARNL3-216ENST00000481242 C15orf65H3BRN8 121 aa7.59□□□□□ -1.19
GARNL3-216ENST00000481242 PSCAO43653 123 aa7.59□□□□□ -1.19
GARNL3-216ENST00000481242 DKK1O94907 266 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms