RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 SSBP2P81877 361 aaPredicted RBP15.11■□□□□ 0.01
CCM2-214ENST00000481194 ARL6IP6Q8N6S5 226 aa15.1■□□□□ 0.01
CCM2-214ENST00000481194 RPLP1P05386 114 aaKnown RBP15.1■□□□□ 0.01
CCM2-214ENST00000481194 BLCAPP62952 87 aa15.1■□□□□ 0.01
CCM2-214ENST00000481194 FOLR2P14207 255 aa15.1■□□□□ 0.01
CCM2-214ENST00000481194 LINC01549A6NIU2 74 aa15.09■□□□□ 0.01
CCM2-214ENST00000481194 Q6YL49 198 aa15.09■□□□□ 0.01
CCM2-214ENST00000481194 OR10J3Q5JRS4 329 aa15.09■□□□□ 0.01
CCM2-214ENST00000481194 DEFB131AP59861 70 aa15.09■□□□□ 0.01
CCM2-214ENST00000481194 ZNF414Q96IQ9 312 aa15.09■□□□□ 0.01
CCM2-214ENST00000481194 RBAKDNA6NC62 111 aa15.08■□□□□ 0.01
CCM2-214ENST00000481194 M0R3E3 92 aa15.08■□□□□ 0.01
CCM2-214ENST00000481194 HOXD3P31249 432 aaPredicted RBP15.08■□□□□ 0.01
CCM2-214ENST00000481194 Q71RC1 249 aaPredicted RBP15.08■□□□□ 0.01
CCM2-214ENST00000481194 GGTLC3B5MD39 225 aa15.08■□□□□ 0
CCM2-214ENST00000481194 Q8TAT8 98 aa15.08■□□□□ 0
CCM2-214ENST00000481194 ATP5LO75964 103 aa15.08■□□□□ 0
CCM2-214ENST00000481194 BRWD1-AS2P59051 145 aa15.08■□□□□ 0
CCM2-214ENST00000481194 FAM231DQ6ZW35 169 aa15.08■□□□□ 0
CCM2-214ENST00000481194 IFITM10A6NMD0 228 aa15.07■□□□□ 0
CCM2-214ENST00000481194 K7EMT4 169 aa15.07■□□□□ 0
CCM2-214ENST00000481194 CRYGBP07316 175 aa15.07■□□□□ 0
CCM2-214ENST00000481194 ST20Q9HBF5 79 aa15.07■□□□□ 0
CCM2-214ENST00000481194 WI2-2373I1.2A0A1W2PRP0 233 aa15.07■□□□□ 0
CCM2-214ENST00000481194 NXT2Q9NPJ8 142 aaKnown RBP15.07■□□□□ 0
CCM2-214ENST00000481194 CTSGP08311 255 aa15.07■□□□□ 0
CCM2-214ENST00000481194 H3BVH4 76 aa15.07■□□□□ 0
CCM2-214ENST00000481194 IGKV1-17P01599 117 aa15.07■□□□□ 0
CCM2-214ENST00000481194 IGFL4Q6B9Z1 124 aa15.07■□□□□ 0
CCM2-214ENST00000481194 APOHP02749 345 aaPredicted RBP15.06■□□□□ 0
CCM2-214ENST00000481194 CCL24O00175 119 aa15.06■□□□□ 0
CCM2-214ENST00000481194 PFN1P07737 140 aaKnown RBP15.06■□□□□ 0
CCM2-214ENST00000481194 FOXA3P55318 350 aaPredicted RBP15.06■□□□□ 0
CCM2-214ENST00000481194 PSMB2P49721 201 aa15.06■□□□□ 0
CCM2-214ENST00000481194 RCHY1Q96PM5 261 aa15.06■□□□□ 0
CCM2-214ENST00000481194 TRAV8-1A0A0A6YYK1 113 aa15.06■□□□□ 0
CCM2-214ENST00000481194 IGF1P05019 195 aa15.05■□□□□ 0
CCM2-214ENST00000481194 TRAV12-3A0A0B4J271 114 aa15.05■□□□□ -0
CCM2-214ENST00000481194 SRSF9Q13242 221 aaKnown RBP eCLIP15.05■□□□□ -0
CCM2-214ENST00000481194 ERCC8Q13216 396 aa15.05■□□□□ -0
CCM2-214ENST00000481194 TMEM101Q96IK0 257 aa15.05■□□□□ -0
CCM2-214ENST00000481194 LENEPQ9Y5L5 61 aa15.05■□□□□ -0
CCM2-214ENST00000481194 RNF182Q8N6D2 247 aa15.05■□□□□ -0
CCM2-214ENST00000481194 WFDC11Q8NEX6 87 aa15.05■□□□□ -0
CCM2-214ENST00000481194 TMEM95Q3KNT9 176 aa15.04■□□□□ -0
CCM2-214ENST00000481194 C19orf54Q5BKX5 351 aa15.04■□□□□ -0
CCM2-214ENST00000481194 C10orf91Q5T1B1 145 aa15.04■□□□□ -0
CCM2-214ENST00000481194 LYZL1Q6UWQ5 148 aa15.04■□□□□ -0
CCM2-214ENST00000481194 C4orf3Q8WVX3 66 aa15.04■□□□□ -0
CCM2-214ENST00000481194 ADMP35318 185 aa15.04■□□□□ -0
CCM2-214ENST00000481194 ADCYAP1P18509 176 aa15.04■□□□□ -0
CCM2-214ENST00000481194 BCL6BQ8N143 479 aaPredicted RBP15.04■□□□□ -0
CCM2-214ENST00000481194 MUC21A0A0G2JKD1 596 aa15.04■□□□□ -0
CCM2-214ENST00000481194 MUC21A0A140T8X8 626 aa15.04■□□□□ -0
CCM2-214ENST00000481194 GPHB5Q86YW7 130 aa15.04■□□□□ -0
CCM2-214ENST00000481194 CHCHD1Q96BP2 118 aaKnown RBP15.03■□□□□ -0
CCM2-214ENST00000481194 PAM16Q9Y3D7 125 aa15.03■□□□□ -0
CCM2-214ENST00000481194 CIDEAO60543 219 aa15.03■□□□□ -0
CCM2-214ENST00000481194 C5orf52A6NGY3 159 aa15.03■□□□□ -0
CCM2-214ENST00000481194 FOXI2Q6ZQN5 318 aa15.03■□□□□ -0
CCM2-214ENST00000481194 NUP35Q8NFH5 326 aa15.03■□□□□ -0
CCM2-214ENST00000481194 DNAH12Q6ZR08 3092 aa15.03■□□□□ -0
CCM2-214ENST00000481194 DNAJC9-AS1A6NH13 148 aa15.03■□□□□ -0
CCM2-214ENST00000481194 CA1P00915 261 aaPredicted RBP15.03■□□□□ -0
CCM2-214ENST00000481194 DPH3P1Q9H4G8 78 aa15.03■□□□□ -0
CCM2-214ENST00000481194 C7orf71A4D174 169 aa15.02■□□□□ -0
CCM2-214ENST00000481194 PAX2Q02962 417 aa15.02■□□□□ -0
CCM2-214ENST00000481194 LINC01559Q495D7 138 aa15.02■□□□□ -0
CCM2-214ENST00000481194 DYNAPQ8N1N2 210 aa15.02■□□□□ -0
CCM2-214ENST00000481194 PRR25Q96S07 402 aa15.02■□□□□ -0
CCM2-214ENST00000481194 CLPSL1A2RUU4 121 aa15.02□□□□□ -0.01
CCM2-214ENST00000481194 COLCA2A8K830 154 aa15.02□□□□□ -0.01
CCM2-214ENST00000481194 GP9P14770 177 aa15.02□□□□□ -0.01
CCM2-214ENST00000481194 C1orf229Q6ZS94 237 aaPredicted RBP15.02□□□□□ -0.01
CCM2-214ENST00000481194 NCOR2Q9Y618 2525 aa15.02□□□□□ -0.01
CCM2-214ENST00000481194 ORMDL2Q53FV1 153 aa15.02□□□□□ -0.01
CCM2-214ENST00000481194 C16orf54Q6UWD8 224 aa15.02□□□□□ -0.01
CCM2-214ENST00000481194 TMEM70Q9BUB7 260 aa15.02□□□□□ -0.01
CCM2-214ENST00000481194 SHANK1Q9Y566 2161 aa15.02□□□□□ -0.01
CCM2-214ENST00000481194 CHD3Q12873 2000 aaKnown RBP15.01□□□□□ -0.01
CCM2-214ENST00000481194 UTF1Q5T230 341 aa15.01□□□□□ -0.01
CCM2-214ENST00000481194 PLCE1Q9P212 2302 aa15.01□□□□□ -0.01
CCM2-214ENST00000481194 SRSF1Q07955 248 aaKnown RBP eCLIP15.01□□□□□ -0.01
CCM2-214ENST00000481194 LAMTOR2Q9Y2Q5 125 aa15.01□□□□□ -0.01
CCM2-214ENST00000481194 MYCNOSP40205 109 aa15.01□□□□□ -0.01
CCM2-214ENST00000481194 FANCD2OSQ96PS1 177 aa15.01□□□□□ -0.01
CCM2-214ENST00000481194 SPAG8Q99932 426 aaPredicted RBP15.01□□□□□ -0.01
CCM2-214ENST00000481194 E7EUB6 86 aa15□□□□□ -0.01
CCM2-214ENST00000481194 RPL35AP18077 110 aaKnown RBP15□□□□□ -0.01
CCM2-214ENST00000481194 C9JQL5 133 aa15□□□□□ -0.01
CCM2-214ENST00000481194 OR9G4Q8NGQ1 327 aa15□□□□□ -0.01
CCM2-214ENST00000481194 WFDC12Q8WWY7 111 aa15□□□□□ -0.01
CCM2-214ENST00000481194 VWC2LB2RUY7 222 aa15□□□□□ -0.01
CCM2-214ENST00000481194 LINC00479Q96M42 142 aa15□□□□□ -0.01
CCM2-214ENST00000481194 IGHG4P01861 327 aa15□□□□□ -0.01
CCM2-214ENST00000481194 PPIFP30405 207 aaKnown RBP15□□□□□ -0.01
CCM2-214ENST00000481194 SSBP4Q9BWG4 385 aaPredicted RBP15□□□□□ -0.01
CCM2-214ENST00000481194 SELENOKQ9Y6D0 94 aa15□□□□□ -0.01
CCM2-214ENST00000481194 TRGV4A0A0C4DH28 118 aa14.99□□□□□ -0.01
CCM2-214ENST00000481194 GZMBP10144 247 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms