RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 COL8A2P25067 703 aa8.16□□□□□ -1.1
PRPF4B-206ENST00000481109 PLNP26678 52 aa8.16□□□□□ -1.1
PRPF4B-206ENST00000481109 PSMB8P28062 276 aa8.16□□□□□ -1.1
PRPF4B-206ENST00000481109 LINC00322Q6ZN03 302 aaPredicted RBP8.16□□□□□ -1.1
PRPF4B-206ENST00000481109 MAFAQ8NHW3 353 aaPredicted RBP8.16□□□□□ -1.1
PRPF4B-206ENST00000481109 FAM167A-AS1Q96KT0 104 aa8.16□□□□□ -1.1
PRPF4B-206ENST00000481109 SPAG17Q6Q759 2223 aa8.16□□□□□ -1.1
PRPF4B-206ENST00000481109 TEX49A0A1B0GTD5 131 aa8.15□□□□□ -1.1
PRPF4B-206ENST00000481109 H0YGG7 62 aa8.15□□□□□ -1.1
PRPF4B-206ENST00000481109 PRSS1P07477 247 aa8.15□□□□□ -1.1
PRPF4B-206ENST00000481109 COX6A1P12074 109 aa8.15□□□□□ -1.1
PRPF4B-206ENST00000481109 HIST1H4AP62805 103 aaKnown RBP8.15□□□□□ -1.1
PRPF4B-206ENST00000481109 FLVCR1-AS1Q8TAF5 88 aa8.15□□□□□ -1.1
PRPF4B-206ENST00000481109 FAM173AQ9BQD7 235 aa8.15□□□□□ -1.1
PRPF4B-206ENST00000481109 COL5A1P20908 1838 aaPredicted RBP8.15□□□□□ -1.1
PRPF4B-206ENST00000481109 A0A1W2PRX2 142 aa8.15□□□□□ -1.1
PRPF4B-206ENST00000481109 hADV29S1A0JD25 119 aa8.15□□□□□ -1.1
PRPF4B-206ENST00000481109 EPM2AB3EWF7 344 aa8.15□□□□□ -1.1
PRPF4B-206ENST00000481109 D6R8Y8 96 aa8.15□□□□□ -1.1
PRPF4B-206ENST00000481109 H0YIG0 161 aa8.15□□□□□ -1.1
PRPF4B-206ENST00000481109 DUTP33316 252 aaKnown RBP8.15□□□□□ -1.1
PRPF4B-206ENST00000481109 SPINK9Q5DT21 86 aa8.15□□□□□ -1.1
PRPF4B-206ENST00000481109 KLF13Q9Y2Y9 288 aaPredicted RBP8.15□□□□□ -1.1
PRPF4B-206ENST00000481109 TRIOO75962 3097 aa8.14□□□□□ -1.11
PRPF4B-206ENST00000481109 LOC389332A0A1B0GUA5 103 aa8.14□□□□□ -1.11
PRPF4B-206ENST00000481109 ZNF785A8K8V0 405 aa8.14□□□□□ -1.11
PRPF4B-206ENST00000481109 CRYGSP22914 178 aa8.14□□□□□ -1.11
PRPF4B-206ENST00000481109 ATXN8Q156A1 80 aa8.14□□□□□ -1.11
PRPF4B-206ENST00000481109 LINC01620Q4KN68 170 aa8.14□□□□□ -1.11
PRPF4B-206ENST00000481109 Q6ZT83 130 aa8.14□□□□□ -1.11
PRPF4B-206ENST00000481109 C5orf38Q86SI9 138 aa8.14□□□□□ -1.11
PRPF4B-206ENST00000481109 LINC00643Q86TS7 51 aa8.14□□□□□ -1.11
PRPF4B-206ENST00000481109 MKXQ8IYA7 352 aa8.14□□□□□ -1.11
PRPF4B-206ENST00000481109 RTL8AQ9BWD3 113 aa8.14□□□□□ -1.11
PRPF4B-206ENST00000481109 NXT2Q9NPJ8 142 aaKnown RBP8.14□□□□□ -1.11
PRPF4B-206ENST00000481109 FAM236DA0A1B0GTK5 79 aa8.14□□□□□ -1.11
PRPF4B-206ENST00000481109 NDUFC2-KCTD14E9PQ53 114 aa8.14□□□□□ -1.11
PRPF4B-206ENST00000481109 FAM236CP0DP71 79 aa8.14□□□□□ -1.11
PRPF4B-206ENST00000481109 BRWD1-AS2P59051 145 aa8.14□□□□□ -1.11
PRPF4B-206ENST00000481109 MDS2Q8NDY4 140 aa8.14□□□□□ -1.11
PRPF4B-206ENST00000481109 DSCR8Q96T75 97 aa8.14□□□□□ -1.11
PRPF4B-206ENST00000481109 DYSFO75923 2080 aa8.14□□□□□ -1.11
PRPF4B-206ENST00000481109 F5P12259 2224 aa8.14□□□□□ -1.11
PRPF4B-206ENST00000481109 A0A0U1RRA0 63 aa8.13□□□□□ -1.11
PRPF4B-206ENST00000481109 A0A1W2PP55 124 aa8.13□□□□□ -1.11
PRPF4B-206ENST00000481109 H3BT86 120 aa8.13□□□□□ -1.11
PRPF4B-206ENST00000481109 SRSF9Q13242 221 aaKnown RBP eCLIP8.13□□□□□ -1.11
PRPF4B-206ENST00000481109 C10orf128Q5T292 105 aa8.13□□□□□ -1.11
PRPF4B-206ENST00000481109 FAM104BQ5XKR9 115 aa8.13□□□□□ -1.11
PRPF4B-206ENST00000481109 SFTA2Q6UW10 78 aa8.13□□□□□ -1.11
PRPF4B-206ENST00000481109 MBD3L2Q8NHZ7 208 aaPredicted RBP8.13□□□□□ -1.11
PRPF4B-206ENST00000481109 FOXC2Q99958 501 aa8.13□□□□□ -1.11
PRPF4B-206ENST00000481109 TRAV40A0A0B4J280 105 aa8.13□□□□□ -1.11
PRPF4B-206ENST00000481109 INS-IGF2F8WCM5 200 aa8.13□□□□□ -1.11
PRPF4B-206ENST00000481109 ARMS2P0C7Q2 107 aa8.13□□□□□ -1.11
PRPF4B-206ENST00000481109 CRIP2P52943 208 aaPredicted RBP8.13□□□□□ -1.11
PRPF4B-206ENST00000481109 ZNF784Q8NCA9 323 aaPredicted RBP8.13□□□□□ -1.11
PRPF4B-206ENST00000481109 PRO1854Q9UHT4 67 aa8.13□□□□□ -1.11
PRPF4B-206ENST00000481109 C17orf98A8MV24 154 aa8.12□□□□□ -1.11
PRPF4B-206ENST00000481109 MDP1Q86V88 176 aa8.12□□□□□ -1.11
PRPF4B-206ENST00000481109 NABP1Q96AH0 204 aa8.12□□□□□ -1.11
PRPF4B-206ENST00000481109 SCNM1Q9BWG6 230 aa8.12□□□□□ -1.11
PRPF4B-206ENST00000481109 SDIM1Q6ZPB5 146 aa8.12□□□□□ -1.11
PRPF4B-206ENST00000481109 APRG1Q8IVJ8 170 aa8.12□□□□□ -1.11
PRPF4B-206ENST00000481109 PRUNE2Q8WUY3 3088 aa8.12□□□□□ -1.11
PRPF4B-206ENST00000481109 A0A1W2PPC4 97 aa8.11□□□□□ -1.11
PRPF4B-206ENST00000481109 SLC25A16P16260 332 aa8.11□□□□□ -1.11
PRPF4B-206ENST00000481109 NXPH1P58417 271 aa8.11□□□□□ -1.11
PRPF4B-206ENST00000481109 UPK3BQ9BT76 320 aa8.11□□□□□ -1.11
PRPF4B-206ENST00000481109 PAXXQ9BUH6 204 aa8.11□□□□□ -1.11
PRPF4B-206ENST00000481109 MRPL35Q9NZE8 188 aaKnown RBP8.11□□□□□ -1.11
PRPF4B-206ENST00000481109 TRBV6-1A0A0K0K1D8 114 aa8.11□□□□□ -1.11
PRPF4B-206ENST00000481109 NBL1P41271 181 aa8.11□□□□□ -1.11
PRPF4B-206ENST00000481109 Q8N8P6 123 aa8.11□□□□□ -1.11
PRPF4B-206ENST00000481109 DPH3P1Q9H4G8 78 aa8.11□□□□□ -1.11
PRPF4B-206ENST00000481109 MUC22E2RYF6 1773 aaPredicted RBP8.1□□□□□ -1.11
PRPF4B-206ENST00000481109 TMEM178BH3BS89 294 aa8.1□□□□□ -1.11
PRPF4B-206ENST00000481109 HSPB6O14558 160 aa8.1□□□□□ -1.11
PRPF4B-206ENST00000481109 ZNF883P0CG24 379 aa8.1□□□□□ -1.11
PRPF4B-206ENST00000481109 CFC1BP0CG36 223 aa8.1□□□□□ -1.11
PRPF4B-206ENST00000481109 CFC1P0CG37 223 aa8.1□□□□□ -1.11
PRPF4B-206ENST00000481109 CCL4L1Q8NHW4 92 aa8.1□□□□□ -1.11
PRPF4B-206ENST00000481109 METTL26Q96S19 204 aa8.1□□□□□ -1.11
PRPF4B-206ENST00000481109 A0A0G2JNJ9 132 aa8.1□□□□□ -1.11
PRPF4B-206ENST00000481109 LEPP41159 167 aa8.1□□□□□ -1.11
PRPF4B-206ENST00000481109 FXYD7P58549 80 aa8.1□□□□□ -1.11
PRPF4B-206ENST00000481109 CCL8P80075 99 aa8.1□□□□□ -1.11
PRPF4B-206ENST00000481109 FAM27E3Q08E93 113 aa8.1□□□□□ -1.11
PRPF4B-206ENST00000481109 ZNF714Q96N38 554 aa8.1□□□□□ -1.11
PRPF4B-206ENST00000481109 TPSG1Q9NRR2 321 aa8.1□□□□□ -1.11
PRPF4B-206ENST00000481109 Q9UFV3 132 aa8.1□□□□□ -1.11
PRPF4B-206ENST00000481109 ARHGEF17Q96PE2 2063 aaPredicted RBP8.09□□□□□ -1.11
PRPF4B-206ENST00000481109 TRAV12-1A0A0B4J245 112 aa8.09□□□□□ -1.11
PRPF4B-206ENST00000481109 ZNF561-AS1K7EIQ3 104 aa8.09□□□□□ -1.11
PRPF4B-206ENST00000481109 ELANEP08246 267 aa8.09□□□□□ -1.11
PRPF4B-206ENST00000481109 LINC00311Q8N616 119 aa8.09□□□□□ -1.11
PRPF4B-206ENST00000481109 NEXN-AS1Q8NBZ9 246 aa8.09□□□□□ -1.11
PRPF4B-206ENST00000481109 FXYD5Q96DB9 178 aa8.09□□□□□ -1.11
PRPF4B-206ENST00000481109 RPUSD1Q9UJJ7 312 aaKnown RBP8.09□□□□□ -1.11
PRPF4B-206ENST00000481109 ADAMTS20P59510 1910 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms