RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 EBLN2Q6P2I7 272 aa9.12□□□□□ -0.95
SHROOM3-205ENST00000481002 TRPT1Q86TN4 253 aaKnown RBP9.12□□□□□ -0.95
SHROOM3-205ENST00000481002 STHQ8IWL8 128 aa9.12□□□□□ -0.95
SHROOM3-205ENST00000481002 EXOC3-AS1Q8N2X6 119 aa9.12□□□□□ -0.95
SHROOM3-205ENST00000481002 RPUSD4Q96CM3 377 aaKnown RBP9.12□□□□□ -0.95
SHROOM3-205ENST00000481002 AAMDCQ9H7C9 122 aa9.12□□□□□ -0.95
SHROOM3-205ENST00000481002 KIR2DL5BA0A0G2JN68 375 aa9.11□□□□□ -0.95
SHROOM3-205ENST00000481002 KIR2DL5BA0A0G2JPC4 375 aa9.11□□□□□ -0.95
SHROOM3-205ENST00000481002 A8MTW9 85 aa9.11□□□□□ -0.95
SHROOM3-205ENST00000481002 F6UB75 175 aa9.11□□□□□ -0.95
SHROOM3-205ENST00000481002 M0R3E3 92 aa9.11□□□□□ -0.95
SHROOM3-205ENST00000481002 FGF8P55075 233 aaPredicted RBP9.11□□□□□ -0.95
SHROOM3-205ENST00000481002 ALKAL2Q6UX46 152 aa9.11□□□□□ -0.95
SHROOM3-205ENST00000481002 KIR2DL5AQ8N109 375 aa9.11□□□□□ -0.95
SHROOM3-205ENST00000481002 OR8A1Q8NGG7 326 aa9.11□□□□□ -0.95
SHROOM3-205ENST00000481002 KIR2DL5BQ8NHK3 375 aa9.11□□□□□ -0.95
SHROOM3-205ENST00000481002 SFT2D1Q8WV19 159 aa9.11□□□□□ -0.95
SHROOM3-205ENST00000481002 B9D2Q9BPU9 175 aa9.11□□□□□ -0.95
SHROOM3-205ENST00000481002 Q9H3A6 140 aa9.11□□□□□ -0.95
SHROOM3-205ENST00000481002 TMPRSS5Q9H3S3 457 aa9.11□□□□□ -0.95
SHROOM3-205ENST00000481002 OTORQ9NRC9 128 aa9.11□□□□□ -0.95
SHROOM3-205ENST00000481002 COL7A1Q02388 2944 aa9.11□□□□□ -0.95
SHROOM3-205ENST00000481002 TRAV1-1A0A0B4J248 108 aa9.1□□□□□ -0.95
SHROOM3-205ENST00000481002 PGPA6NDG6 321 aa9.1□□□□□ -0.95
SHROOM3-205ENST00000481002 PRAC2D3DTV9 90 aa9.1□□□□□ -0.95
SHROOM3-205ENST00000481002 DUSP14O95147 198 aaKnown RBP9.1□□□□□ -0.95
SHROOM3-205ENST00000481002 RPL35AP18077 110 aaKnown RBP9.1□□□□□ -0.95
SHROOM3-205ENST00000481002 HAGHQ16775 308 aa9.1□□□□□ -0.95
SHROOM3-205ENST00000481002 FAM74A1Q5RGS3 127 aa9.1□□□□□ -0.95
SHROOM3-205ENST00000481002 ARL6IP6Q8N6S5 226 aa9.1□□□□□ -0.95
SHROOM3-205ENST00000481002 PRKDCP78527 4128 aaKnown RBP9.1□□□□□ -0.95
SHROOM3-205ENST00000481002 A0A1W2PRE2 83 aa9.09□□□□□ -0.95
SHROOM3-205ENST00000481002 UBE2CO00762 179 aa9.09□□□□□ -0.95
SHROOM3-205ENST00000481002 ZNF705DP0CH99 300 aaPredicted RBP9.09□□□□□ -0.95
SHROOM3-205ENST00000481002 ZNF705BP0CI00 300 aaPredicted RBP9.09□□□□□ -0.95
SHROOM3-205ENST00000481002 APOC4P55056 127 aa9.09□□□□□ -0.95
SHROOM3-205ENST00000481002 SBSPONQ8IVN8 264 aa9.09□□□□□ -0.95
SHROOM3-205ENST00000481002 IQCF2Q8IXL9 164 aa9.09□□□□□ -0.95
SHROOM3-205ENST00000481002 CSTL1Q9H114 145 aa9.09□□□□□ -0.95
SHROOM3-205ENST00000481002 ZNF705EA8MWA4 302 aaPredicted RBP9.08□□□□□ -0.96
SHROOM3-205ENST00000481002 HBE1P02100 147 aa9.08□□□□□ -0.96
SHROOM3-205ENST00000481002 GIG44P09565 113 aaPredicted RBP9.08□□□□□ -0.96
SHROOM3-205ENST00000481002 CNN1P51911 297 aaKnown RBP9.08□□□□□ -0.96
SHROOM3-205ENST00000481002 MORN3Q6PF18 240 aaPredicted RBP9.08□□□□□ -0.96
SHROOM3-205ENST00000481002 TEX261Q6UWH6 196 aa9.08□□□□□ -0.96
SHROOM3-205ENST00000481002 OR4B1Q8NGF8 309 aa9.08□□□□□ -0.96
SHROOM3-205ENST00000481002 OR10J6PQ8NGY7 276 aa9.08□□□□□ -0.96
SHROOM3-205ENST00000481002 RXFP4Q8TDU9 374 aa9.08□□□□□ -0.96
SHROOM3-205ENST00000481002 NKX6-2Q9C056 277 aaPredicted RBP9.08□□□□□ -0.96
SHROOM3-205ENST00000481002 ARL2-SNX15V9GYD0 113 aa9.08□□□□□ -0.96
SHROOM3-205ENST00000481002 FAM74A7A6NL05 159 aa9.07□□□□□ -0.96
SHROOM3-205ENST00000481002 NPIPB6E9PJ23 425 aa9.07□□□□□ -0.96
SHROOM3-205ENST00000481002 TEX46H3BTG2 121 aa9.07□□□□□ -0.96
SHROOM3-205ENST00000481002 PRB4P10163 310 aaPredicted RBP9.07□□□□□ -0.96
SHROOM3-205ENST00000481002 CSN1S1P47710 185 aa9.07□□□□□ -0.96
SHROOM3-205ENST00000481002 PPT1P50897 306 aa9.07□□□□□ -0.96
SHROOM3-205ENST00000481002 NUTF2P61970 127 aaKnown RBP9.07□□□□□ -0.96
SHROOM3-205ENST00000481002 SUMO1P63165 101 aaKnown RBP9.07□□□□□ -0.96
SHROOM3-205ENST00000481002 BLOC1S1P78537 153 aa9.07□□□□□ -0.96
SHROOM3-205ENST00000481002 HIST1H1AQ02539 215 aaPredicted RBP9.07□□□□□ -0.96
SHROOM3-205ENST00000481002 AMTNQ6UX39 209 aa9.07□□□□□ -0.96
SHROOM3-205ENST00000481002 LINC00477Q96M19 166 aa9.07□□□□□ -0.96
SHROOM3-205ENST00000481002 ASCL2Q99929 193 aa9.07□□□□□ -0.96
SHROOM3-205ENST00000481002 TM2D3Q9BRN9 247 aa9.07□□□□□ -0.96
SHROOM3-205ENST00000481002 YTHDF2Q9Y5A9 579 aaKnown RBP9.07□□□□□ -0.96
SHROOM3-205ENST00000481002 TGP01266 2768 aa9.07□□□□□ -0.96
SHROOM3-205ENST00000481002 RBAKDNA6NC62 111 aa9.06□□□□□ -0.96
SHROOM3-205ENST00000481002 GGTLC3B5MD39 225 aa9.06□□□□□ -0.96
SHROOM3-205ENST00000481002 DIRC3C9JPN6 131 aa9.06□□□□□ -0.96
SHROOM3-205ENST00000481002 IGKV3-20P01619 116 aa9.06□□□□□ -0.96
SHROOM3-205ENST00000481002 SLC25A5P05141 298 aaKnown RBP9.06□□□□□ -0.96
SHROOM3-205ENST00000481002 NHLRC4P0CG21 123 aaPredicted RBP9.06□□□□□ -0.96
SHROOM3-205ENST00000481002 CCL20P78556 96 aa9.06□□□□□ -0.96
SHROOM3-205ENST00000481002 PMS2P11Q13670 270 aa9.06□□□□□ -0.96
SHROOM3-205ENST00000481002 C9orf47Q6ZRZ4 202 aa9.06□□□□□ -0.96
SHROOM3-205ENST00000481002 Q6ZWC4 215 aa9.06□□□□□ -0.96
SHROOM3-205ENST00000481002 C5orf17Q8NAS9 161 aa9.06□□□□□ -0.96
SHROOM3-205ENST00000481002 ZNF680Q8NEM1 530 aa9.06□□□□□ -0.96
SHROOM3-205ENST00000481002 CMTM2Q8TAZ6 248 aa9.06□□□□□ -0.96
SHROOM3-205ENST00000481002 TENM3Q9P273 2699 aa9.06□□□□□ -0.96
SHROOM3-205ENST00000481002 IGKV2-40A0A087WW87 121 aaPredicted RBP9.05□□□□□ -0.96
SHROOM3-205ENST00000481002 A0A1B0GV50 99 aa9.05□□□□□ -0.96
SHROOM3-205ENST00000481002 IGKV2D-40P01614 121 aaPredicted RBP9.05□□□□□ -0.96
SHROOM3-205ENST00000481002 CT45A10P0DMU9 189 aa9.05□□□□□ -0.96
SHROOM3-205ENST00000481002 UBE2G2P60604 165 aa9.05□□□□□ -0.96
SHROOM3-205ENST00000481002 ERCC8Q13216 396 aa9.05□□□□□ -0.96
SHROOM3-205ENST00000481002 CCDC28AQ8IWP9 274 aa9.05□□□□□ -0.96
SHROOM3-205ENST00000481002 LYPD6BQ8NI32 183 aa9.05□□□□□ -0.96
SHROOM3-205ENST00000481002 VGLL1Q99990 258 aa9.05□□□□□ -0.96
SHROOM3-205ENST00000481002 C1QTNF4Q9BXJ3 329 aa9.05□□□□□ -0.96
SHROOM3-205ENST00000481002 AGPAT4-IT1Q9H0P7 198 aa9.05□□□□□ -0.96
SHROOM3-205ENST00000481002 SLC35B3Q9H1N7 401 aa9.05□□□□□ -0.96
SHROOM3-205ENST00000481002 PPP1R14DQ9NXH3 145 aa9.05□□□□□ -0.96
SHROOM3-205ENST00000481002 EPDR1Q9UM22 224 aa9.05□□□□□ -0.96
SHROOM3-205ENST00000481002 DNAH9Q9NYC9 4486 aa9.05□□□□□ -0.96
SHROOM3-205ENST00000481002 SERTM2A0A1B0GWG4 89 aa9.04□□□□□ -0.96
SHROOM3-205ENST00000481002 PAGE4O60829 102 aa9.04□□□□□ -0.96
SHROOM3-205ENST00000481002 CA1P00915 261 aaPredicted RBP9.04□□□□□ -0.96
SHROOM3-205ENST00000481002 IFNA7P01567 189 aa9.04□□□□□ -0.96
SHROOM3-205ENST00000481002 AMBPP02760 352 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms