RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 HAGHQ16775 308 aa8.98□□□□□ -0.97
TRA2B-212ENST00000480461 KHDC3LQ587J8 217 aa8.98□□□□□ -0.97
TRA2B-212ENST00000480461 ACTL10Q5JWF8 245 aa8.98□□□□□ -0.97
TRA2B-212ENST00000480461 LCN15Q6UWW0 184 aa8.98□□□□□ -0.97
TRA2B-212ENST00000480461 TRPT1Q86TN4 253 aaKnown RBP8.98□□□□□ -0.97
TRA2B-212ENST00000480461 LRRC20Q8TCA0 184 aa8.98□□□□□ -0.97
TRA2B-212ENST00000480461 SAV1Q9H4B6 383 aaPredicted RBP8.98□□□□□ -0.97
TRA2B-212ENST00000480461 HYDINQ4G0P3 5121 aa8.98□□□□□ -0.97
TRA2B-212ENST00000480461 AGRNO00468 2067 aa8.97□□□□□ -0.97
TRA2B-212ENST00000480461 A0A0J9YX75 114 aa8.97□□□□□ -0.97
TRA2B-212ENST00000480461 CTXND1A0A1B0GTU2 59 aa8.97□□□□□ -0.97
TRA2B-212ENST00000480461 M0R3E3 92 aa8.97□□□□□ -0.97
TRA2B-212ENST00000480461 ZNF253O75346 499 aa8.97□□□□□ -0.97
TRA2B-212ENST00000480461 GCHFRP30047 84 aa8.97□□□□□ -0.97
TRA2B-212ENST00000480461 FGF8P55075 233 aaPredicted RBP8.97□□□□□ -0.97
TRA2B-212ENST00000480461 TAS2R45P59539 299 aa8.97□□□□□ -0.97
TRA2B-212ENST00000480461 RANP62826 216 aaKnown RBP8.97□□□□□ -0.97
TRA2B-212ENST00000480461 EIF5AP63241 154 aaKnown RBP8.97□□□□□ -0.97
TRA2B-212ENST00000480461 PQLC2Q6ZP29 291 aa8.97□□□□□ -0.97
TRA2B-212ENST00000480461 MBD3L1Q8WWY6 194 aa8.97□□□□□ -0.97
TRA2B-212ENST00000480461 SLC50A1Q9BRV3 221 aa8.97□□□□□ -0.97
TRA2B-212ENST00000480461 LOC102724200A0A096LPH7 203 aaPredicted RBP8.96□□□□□ -0.98
TRA2B-212ENST00000480461 UMAD1C9J7I0 102 aa8.96□□□□□ -0.98
TRA2B-212ENST00000480461 IGKV3-20P01619 116 aa8.96□□□□□ -0.98
TRA2B-212ENST00000480461 UBE2L3P68036 154 aaKnown RBP8.96□□□□□ -0.98
TRA2B-212ENST00000480461 PDE6HQ13956 83 aa8.96□□□□□ -0.98
TRA2B-212ENST00000480461 ICAM4Q14773 271 aa8.96□□□□□ -0.98
TRA2B-212ENST00000480461 FAM74A1Q5RGS3 127 aa8.96□□□□□ -0.98
TRA2B-212ENST00000480461 SAMD13Q5VXD3 122 aa8.96□□□□□ -0.98
TRA2B-212ENST00000480461 FOXI2Q6ZQN5 318 aa8.96□□□□□ -0.98
TRA2B-212ENST00000480461 FAM213BQ8TBF2 198 aa8.96□□□□□ -0.98
TRA2B-212ENST00000480461 RPUSD4Q96CM3 377 aaKnown RBP8.96□□□□□ -0.98
TRA2B-212ENST00000480461 A8MTW9 85 aa8.95□□□□□ -0.98
TRA2B-212ENST00000480461 CXorf1O96002 111 aa8.95□□□□□ -0.98
TRA2B-212ENST00000480461 HLA-DRB4P13762 266 aa8.95□□□□□ -0.98
TRA2B-212ENST00000480461 SULT1A2P50226 295 aa8.95□□□□□ -0.98
TRA2B-212ENST00000480461 CCL20P78556 96 aa8.95□□□□□ -0.98
TRA2B-212ENST00000480461 AMTNQ6UX39 209 aa8.95□□□□□ -0.98
TRA2B-212ENST00000480461 ZNF738Q8NE65 137 aa8.95□□□□□ -0.98
TRA2B-212ENST00000480461 Q9H3A6 140 aa8.95□□□□□ -0.98
TRA2B-212ENST00000480461 HLA-DRB4X5D2U9 266 aa8.95□□□□□ -0.98
TRA2B-212ENST00000480461 MAP1LC3B2A6NCE7 125 aa8.94□□□□□ -0.98
TRA2B-212ENST00000480461 CNN1P51911 297 aaKnown RBP8.94□□□□□ -0.98
TRA2B-212ENST00000480461 PSG9Q00887 426 aa8.94□□□□□ -0.98
TRA2B-212ENST00000480461 ALKAL2Q6UX46 152 aa8.94□□□□□ -0.98
TRA2B-212ENST00000480461 STHQ8IWL8 128 aa8.94□□□□□ -0.98
TRA2B-212ENST00000480461 OR8A1Q8NGG7 326 aa8.94□□□□□ -0.98
TRA2B-212ENST00000480461 SFT2D1Q8WV19 159 aa8.94□□□□□ -0.98
TRA2B-212ENST00000480461 MAP1LC3BQ9GZQ8 125 aa8.94□□□□□ -0.98
TRA2B-212ENST00000480461 CSTL1Q9H114 145 aa8.94□□□□□ -0.98
TRA2B-212ENST00000480461 YTHDF2Q9Y5A9 579 aaKnown RBP8.94□□□□□ -0.98
TRA2B-212ENST00000480461 PGPA6NDG6 321 aa8.93□□□□□ -0.98
TRA2B-212ENST00000480461 C4BPBP20851 252 aa8.93□□□□□ -0.98
TRA2B-212ENST00000480461 FXYD7P58549 80 aa8.93□□□□□ -0.98
TRA2B-212ENST00000480461 ERCC8Q13216 396 aa8.93□□□□□ -0.98
TRA2B-212ENST00000480461 DPPA3Q6W0C5 159 aa8.93□□□□□ -0.98
TRA2B-212ENST00000480461 LYPD1Q8N2G4 141 aa8.93□□□□□ -0.98
TRA2B-212ENST00000480461 OR4B1Q8NGF8 309 aa8.93□□□□□ -0.98
TRA2B-212ENST00000480461 CLUHP3Q96NS8 147 aa8.93□□□□□ -0.98
TRA2B-212ENST00000480461 TM2D3Q9BRN9 247 aa8.93□□□□□ -0.98
TRA2B-212ENST00000480461 SLC35B3Q9H1N7 401 aa8.93□□□□□ -0.98
TRA2B-212ENST00000480461 RETNQ9HD89 108 aa8.93□□□□□ -0.98
TRA2B-212ENST00000480461 KIR2DL5BA0A0G2JN68 375 aa8.92□□□□□ -0.98
TRA2B-212ENST00000480461 KIR2DL5BA0A0G2JPC4 375 aa8.92□□□□□ -0.98
TRA2B-212ENST00000480461 A0A1B0GV50 99 aa8.92□□□□□ -0.98
TRA2B-212ENST00000480461 H2AFB1P0C5Y9 115 aa8.92□□□□□ -0.98
TRA2B-212ENST00000480461 CT45A10P0DMU9 189 aa8.92□□□□□ -0.98
TRA2B-212ENST00000480461 EIF5AL1Q6IS14 154 aaKnown RBP8.92□□□□□ -0.98
TRA2B-212ENST00000480461 EBLN2Q6P2I7 272 aa8.92□□□□□ -0.98
TRA2B-212ENST00000480461 KIR2DL5AQ8N109 375 aa8.92□□□□□ -0.98
TRA2B-212ENST00000480461 CSNK1G2-AS1Q8NCQ2 148 aa8.92□□□□□ -0.98
TRA2B-212ENST00000480461 KIR2DL5BQ8NHK3 375 aa8.92□□□□□ -0.98
TRA2B-212ENST00000480461 MRPL53Q96EL3 112 aaKnown RBP8.92□□□□□ -0.98
TRA2B-212ENST00000480461 RCHY1Q96PM5 261 aa8.92□□□□□ -0.98
TRA2B-212ENST00000480461 VGLL1Q99990 258 aa8.92□□□□□ -0.98
TRA2B-212ENST00000480461 AGPAT4-IT1Q9H0P7 198 aa8.92□□□□□ -0.98
TRA2B-212ENST00000480461 OTORQ9NRC9 128 aa8.92□□□□□ -0.98
TRA2B-212ENST00000480461 CLEC5AQ9NY25 188 aa8.92□□□□□ -0.98
TRA2B-212ENST00000480461 PRELID1Q9Y255 219 aa8.92□□□□□ -0.98
TRA2B-212ENST00000480461 IGKV2-40A0A087WW87 121 aaPredicted RBP8.91□□□□□ -0.98
TRA2B-212ENST00000480461 TRAV1-1A0A0B4J248 108 aa8.91□□□□□ -0.98
TRA2B-212ENST00000480461 GGTLC3B5MD39 225 aa8.91□□□□□ -0.98
TRA2B-212ENST00000480461 NPIPB6E9PJ23 425 aa8.91□□□□□ -0.98
TRA2B-212ENST00000480461 IGKV2D-40P01614 121 aaPredicted RBP8.91□□□□□ -0.98
TRA2B-212ENST00000480461 RAB5CP51148 216 aa8.91□□□□□ -0.98
TRA2B-212ENST00000480461 UBE2G2P60604 165 aa8.91□□□□□ -0.98
TRA2B-212ENST00000480461 SUMO1P63165 101 aaKnown RBP8.91□□□□□ -0.98
TRA2B-212ENST00000480461 HIST1H1AQ02539 215 aaPredicted RBP8.91□□□□□ -0.98
TRA2B-212ENST00000480461 KIR3DS1Q14943 382 aa8.91□□□□□ -0.98
TRA2B-212ENST00000480461 IQCF2Q8IXL9 164 aa8.91□□□□□ -0.98
TRA2B-212ENST00000480461 OVOL2Q9BRP0 275 aa8.91□□□□□ -0.98
TRA2B-212ENST00000480461 AAMDCQ9H7C9 122 aa8.91□□□□□ -0.98
TRA2B-212ENST00000480461 TMEM167BQ9NRX6 74 aa8.91□□□□□ -0.98
TRA2B-212ENST00000480461 A0A1W2PRE2 83 aa8.9□□□□□ -0.98
TRA2B-212ENST00000480461 FAM74A7A6NL05 159 aa8.9□□□□□ -0.98
TRA2B-212ENST00000480461 DIRC3C9JPN6 131 aa8.9□□□□□ -0.98
TRA2B-212ENST00000480461 CRXO43186 299 aaPredicted RBP8.9□□□□□ -0.98
TRA2B-212ENST00000480461 APOC4P55056 127 aa8.9□□□□□ -0.98
TRA2B-212ENST00000480461 GNG5P63218 68 aa8.9□□□□□ -0.98
TRA2B-212ENST00000480461 ZFAND6Q6FIF0 208 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms