RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 ZNF705FA8MVS1 300 aaPredicted RBP13.19□□□□□ -0.3
UPF3A-206ENST00000480362 PEX7O00628 323 aa13.19□□□□□ -0.3
UPF3A-206ENST00000480362 IGLV1-51P01701 117 aa13.19□□□□□ -0.3
UPF3A-206ENST00000480362 TCRAP04437 139 aa13.19□□□□□ -0.3
UPF3A-206ENST00000480362 CD33P20138 364 aa13.19□□□□□ -0.3
UPF3A-206ENST00000480362 LCN12Q6JVE5 192 aa13.19□□□□□ -0.3
UPF3A-206ENST00000480362 WFDC9Q8NEX5 89 aa13.19□□□□□ -0.3
UPF3A-206ENST00000480362 HIST1H2BAQ96A08 127 aa13.19□□□□□ -0.3
UPF3A-206ENST00000480362 RPUSD4Q96CM3 377 aaKnown RBP13.19□□□□□ -0.3
UPF3A-206ENST00000480362 C20orf173Q96LM9 149 aa13.19□□□□□ -0.3
UPF3A-206ENST00000480362 LINC00052Q96N35 136 aa13.19□□□□□ -0.3
UPF3A-206ENST00000480362 ATRQ13535 2644 aa13.19□□□□□ -0.3
UPF3A-206ENST00000480362 TRAV2A0A0B4J234 112 aa13.18□□□□□ -0.3
UPF3A-206ENST00000480362 DIRC3C9JPN6 131 aa13.18□□□□□ -0.3
UPF3A-206ENST00000480362 SOHLH1Q5JUK2 328 aa13.18□□□□□ -0.3
UPF3A-206ENST00000480362 FAM24BQ8N5W8 94 aa13.18□□□□□ -0.3
UPF3A-206ENST00000480362 OR2K2Q8NGT1 345 aa13.18□□□□□ -0.3
UPF3A-206ENST00000480362 MRPL53Q96EL3 112 aaKnown RBP13.18□□□□□ -0.3
UPF3A-206ENST00000480362 ATG101Q9BSB4 218 aa13.18□□□□□ -0.3
UPF3A-206ENST00000480362 F8W036 122 aa13.17□□□□□ -0.3
UPF3A-206ENST00000480362 ATP6V1G1O75348 118 aa13.17□□□□□ -0.3
UPF3A-206ENST00000480362 AKR1C3P42330 323 aa13.17□□□□□ -0.3
UPF3A-206ENST00000480362 GUCA2BQ16661 112 aa13.17□□□□□ -0.3
UPF3A-206ENST00000480362 ZNF674Q2M3X9 581 aa13.17□□□□□ -0.3
UPF3A-206ENST00000480362 C9orf66Q5T8R8 295 aa13.17□□□□□ -0.3
UPF3A-206ENST00000480362 GOLT1AQ6ZVE7 132 aa13.17□□□□□ -0.3
UPF3A-206ENST00000480362 ARL6IP6Q8N6S5 226 aa13.17□□□□□ -0.3
UPF3A-206ENST00000480362 C2CD4CQ8TF44 421 aa13.17□□□□□ -0.3
UPF3A-206ENST00000480362 LINC00479Q96M42 142 aa13.17□□□□□ -0.3
UPF3A-206ENST00000480362 SPAG8Q99932 426 aaPredicted RBP13.17□□□□□ -0.3
UPF3A-206ENST00000480362 DERL1Q9BUN8 251 aa13.17□□□□□ -0.3
UPF3A-206ENST00000480362 PARLQ9H300 379 aa13.17□□□□□ -0.3
UPF3A-206ENST00000480362 PRAC2D3DTV9 90 aa13.16□□□□□ -0.3
UPF3A-206ENST00000480362 ZNF688P0C7X2 276 aa13.16□□□□□ -0.3
UPF3A-206ENST00000480362 ADCYAP1P18509 176 aa13.16□□□□□ -0.3
UPF3A-206ENST00000480362 INSL3P51460 131 aa13.16□□□□□ -0.3
UPF3A-206ENST00000480362 CNN1P51911 297 aaKnown RBP13.16□□□□□ -0.3
UPF3A-206ENST00000480362 ZNF738Q8NE65 137 aa13.16□□□□□ -0.3
UPF3A-206ENST00000480362 MCRIP2Q9BUT9 160 aaKnown RBP13.16□□□□□ -0.3
UPF3A-206ENST00000480362 TRAV34A0A0B4J273 112 aa13.15□□□□□ -0.3
UPF3A-206ENST00000480362 OR4C46A6NHA9 309 aa13.15□□□□□ -0.3
UPF3A-206ENST00000480362 ZNF727A8MUV8 499 aa13.15□□□□□ -0.3
UPF3A-206ENST00000480362 KRBOX1C9JBD0 128 aa13.15□□□□□ -0.3
UPF3A-206ENST00000480362 SNRPD3P62318 126 aaKnown RBP13.15□□□□□ -0.3
UPF3A-206ENST00000480362 SGK494Q96LW2 274 aa13.15□□□□□ -0.3
UPF3A-206ENST00000480362 SEC11CQ9BY50 192 aa13.15□□□□□ -0.3
UPF3A-206ENST00000480362 ZNF256Q9Y2P7 627 aaPredicted RBP13.15□□□□□ -0.3
UPF3A-206ENST00000480362 TENM1Q9UKZ4 2725 aa13.15□□□□□ -0.3
UPF3A-206ENST00000480362 IGKV2-40A0A087WW87 121 aaPredicted RBP13.14□□□□□ -0.31
UPF3A-206ENST00000480362 K7EQM0 130 aa13.14□□□□□ -0.31
UPF3A-206ENST00000480362 IGKV2D-40P01614 121 aaPredicted RBP13.14□□□□□ -0.31
UPF3A-206ENST00000480362 RPL35P42766 123 aaKnown RBP13.14□□□□□ -0.31
UPF3A-206ENST00000480362 PSMG4Q5JS54 123 aa13.14□□□□□ -0.31
UPF3A-206ENST00000480362 SMIM7Q9BQ49 75 aa13.14□□□□□ -0.31
UPF3A-206ENST00000480362 SERTM2A0A1B0GWG4 89 aa13.13□□□□□ -0.31
UPF3A-206ENST00000480362 S100A9P06702 114 aaKnown RBP13.13□□□□□ -0.31
UPF3A-206ENST00000480362 IGLL1P15814 213 aa13.13□□□□□ -0.31
UPF3A-206ENST00000480362 TAS2R60P59551 318 aa13.13□□□□□ -0.31
UPF3A-206ENST00000480362 DEFB1P60022 68 aa13.13□□□□□ -0.31
UPF3A-206ENST00000480362 UBE2G1P62253 170 aa13.13□□□□□ -0.31
UPF3A-206ENST00000480362 TMEM183BQ1AE95 376 aa13.13□□□□□ -0.31
UPF3A-206ENST00000480362 FAM74A3Q4VXF1 159 aa13.13□□□□□ -0.31
UPF3A-206ENST00000480362 C10orf91Q5T1B1 145 aa13.13□□□□□ -0.31
UPF3A-206ENST00000480362 KLF12Q9Y4X4 402 aa13.13□□□□□ -0.31
UPF3A-206ENST00000480362 TRAV8-1A0A0A6YYK1 113 aa13.12□□□□□ -0.31
UPF3A-206ENST00000480362 TMEM75Q8N9X5 138 aa13.12□□□□□ -0.31
UPF3A-206ENST00000480362 FMC1Q96HJ9 113 aa13.12□□□□□ -0.31
UPF3A-206ENST00000480362 VGLL1Q99990 258 aa13.12□□□□□ -0.31
UPF3A-206ENST00000480362 RBAKDNA6NC62 111 aa13.11□□□□□ -0.31
UPF3A-206ENST00000480362 IGLV2-11P01706 119 aa13.11□□□□□ -0.31
UPF3A-206ENST00000480362 ZNF705DP0CH99 300 aaPredicted RBP13.11□□□□□ -0.31
UPF3A-206ENST00000480362 ZNF705BP0CI00 300 aaPredicted RBP13.11□□□□□ -0.31
UPF3A-206ENST00000480362 DEFB131AP59861 70 aa13.11□□□□□ -0.31
UPF3A-206ENST00000480362 FLI1Q01543 452 aaPredicted RBP13.11□□□□□ -0.31
UPF3A-206ENST00000480362 ERCC8Q13216 396 aa13.11□□□□□ -0.31
UPF3A-206ENST00000480362 PRNTQ86SH4 94 aa13.11□□□□□ -0.31
UPF3A-206ENST00000480362 PSG8Q9UQ74 426 aa13.11□□□□□ -0.31
UPF3A-206ENST00000480362 CARHSP1Q9Y2V2 147 aaKnown RBP13.11□□□□□ -0.31
UPF3A-206ENST00000480362 TRBV20OR9-2A0A075B6H5 130 aa13.1□□□□□ -0.31
UPF3A-206ENST00000480362 TRBV6-1A0A0K0K1D8 114 aa13.1□□□□□ -0.31
UPF3A-206ENST00000480362 F6UB75 175 aa13.1□□□□□ -0.31
UPF3A-206ENST00000480362 TMEM241Q24JQ0 296 aa13.1□□□□□ -0.31
UPF3A-206ENST00000480362 CENPWQ5EE01 88 aa13.1□□□□□ -0.31
UPF3A-206ENST00000480362 OR8A1Q8NGG7 326 aa13.1□□□□□ -0.31
UPF3A-206ENST00000480362 OR10J6PQ8NGY7 276 aa13.1□□□□□ -0.31
UPF3A-206ENST00000480362 IGF2BP2-AS1Q96M15 143 aa13.1□□□□□ -0.31
UPF3A-206ENST00000480362 NIPSNAP3BQ9BS92 247 aa13.1□□□□□ -0.31
UPF3A-206ENST00000480362 AGPAT4-IT1Q9H0P7 198 aa13.1□□□□□ -0.31
UPF3A-206ENST00000480362 MAP6D1Q9H9H5 199 aa13.1□□□□□ -0.31
UPF3A-206ENST00000480362 NAT8Q9UHE5 227 aa13.1□□□□□ -0.31
UPF3A-206ENST00000480362 PGPEP1LA6NFU8 196 aa13.09□□□□□ -0.31
UPF3A-206ENST00000480362 C9JCJ5 164 aa13.09□□□□□ -0.31
UPF3A-206ENST00000480362 APOC3P02656 99 aa13.09□□□□□ -0.31
UPF3A-206ENST00000480362 S100A1P23297 94 aa13.09□□□□□ -0.31
UPF3A-206ENST00000480362 GNG4P50150 75 aa13.09□□□□□ -0.31
UPF3A-206ENST00000480362 HIST1H1AQ02539 215 aaPredicted RBP13.09□□□□□ -0.31
UPF3A-206ENST00000480362 BEAN1Q3B7T3 259 aa13.09□□□□□ -0.31
UPF3A-206ENST00000480362 PRR31Q5SQ13 230 aa13.09□□□□□ -0.31
UPF3A-206ENST00000480362 BAGE2Q86Y30 109 aa13.09□□□□□ -0.31
UPF3A-206ENST00000480362 SDF2L1Q9HCN8 221 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms